Kryptolebias marmoratus (mangrove rivulus): 108232415
Help
Entry
108232415 CDS
T05608
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4
KO
K17902
TBC1 domain family member 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108232415 (tbc1d4)
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108232415 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108232415 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
108232415 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
YfbR-like
zf-C4H2
PTB
F_actin_bind
Motif
Other DBs
NCBI-GeneID:
108232415
NCBI-ProteinID:
XP_017265672
LinkDB
All DBs
Position
LG6:17014324..17048897
Genome browser
AA seq
1288 aa
AA seq
DB search
MESQQEEKEQTERRFLLTYIGWCSLDRRTTLPMLPWLVAEIRRRGERGDCGPVMQPRDVQ
LVLSPPFVRCVPCGSSNASVFIFEHKAQLVSRFIHNSNDLSYFAYLLRGQPDNPESEMTC
HVFRAGDPNQVPEVITSIRQVSKSALKEEAKPKQEADEAFYNSQKFEVLYCGKVTVGHKK
ASASLIDDCIDKFRQHETERKRLRLLNGQRGSTENASLELLTVGGEGDPLSTALNKTREE
NEAPEEEELLTGLSLPSSASQSSLRGAFPECILEDSGFEEPQTFRTRCSSLAGNMQRKPG
EGAIMGPTRRRHASAPNNVQPSDSDKNRTMLFQVGRFEVNLISPDSKTMVLEKNFKDISS
CCQGVRQTDHFGFICRDQSEPGPSQYACYVFQCASESLVDEVMMTLKQAFTTAAALQSNK
TPVQLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLNDNEQAEIFERVQKLKPGSD
QEENELAILHLRQLCEAKQKSHLHIGEAPQNVANSLAGGDGAATGSRFKLDDLKNKARTS
LTSSLENIFARGANRMRGRLGSMGSISSFERQDEESPGPSPPGSPLAFPDDDQESGQHFR
RRAHTFSHPPVRKRISFESQPTNQAKQAPLRRQHSVNPELLQGSPAAVSRTRSVSESESS
FSLPSSFPAPTFLKSFYQGSLSSLADSGTLKSNGEGRKRTLSVCSNDSLSGGLPQTPRRV
SWRQKIFLRVASPLNKPSASMQHTDYPDSTELLPLSPRSLDQGLDPLRRLLPPAHDQSSD
KRPKRTGADYRALWKTAIHQQILLLRMEKENQKLEASRDELHIRKMKLNYQEVCQCSKEA
QALWEKKLNAPGRTTNPQDKEEVYRVLCHGVPKSRRGEVWLFLSHQHRLRHRLPQRQQAP
DTHYQDLLKQLTAQQHAILVDLGRTFPTHQYFSAQLGAGQLSLYNLLKAYSLLDTEVGYC
QGVSFVAGVLLLHMSEEQAFDMLKFLMYDLSIRRQYRPDMVSLQIQMYQLSRLLHDYHRD
LYNHFEEHEICPSLYAAPWFLTLFASQFPLGFVSRIFDFVFAQGTEVVFKVALCLLSSHE
GEIMKCDSFEGIVDYLKTTLPTLTQAQMEQTIAKVMEMDISKQLHAYEVEYNVLQDEILE
TSGPLLDDSDRLDKLEKTNVQLKKQNMELLEKLQAARQKIQSLETSVDNFLSRESKMKHM
IRSLEQERVAYQRTIERMRSCLPPDALTDVEMTQIKTGPNGKAKTAAKNATFRHRLRAHT
PKEWENKPNLRRCSAAFHIFSFAGELKC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagagccagcaggaggagaaggagcagactgagaggcgcttcctcctgacttacatc
ggctggtgctcgctcgacaggcggaccactctgcccatgctgccgtggctggtggccgag
atccgccggaggggcgagaggggcgactgcggccccgtcatgcagccccgcgacgtgcag
ctggtgctcagcccgcccttcgtccgctgcgtcccgtgcggcagcagcaacgcgtccgtg
ttcatcttcgagcacaaggcgcagctcgtctcccgcttcatccacaacagcaacgacctg
agctacttcgcctacctgctgcggggtcagccggacaacccggagtccgagatgacgtgt
cacgtgttcagggccggggaccccaaccaggtcccagaggtcatcacgagcattcgacag
gtgtccaagtcggccctgaaggaagaggccaaacccaaacaggaagcagacgaggccttc
tacaactcgcagaagtttgaagtgctttactgtggcaaggtgacggttggccacaagaaa
gcgtcagcctccctgattgacgactgcatcgacaagtttcgtcagcacgagactgaacgc
aagcgcctgcggctgctcaacggtcagcgaggctctacggagaacgcatccctggagctc
ctcacagtggggggggaaggagaccctctttccactgctctgaataagactagggaggaa
aatgaagcccctgaggaggaggagctgctcacaggtttaagtctgcccagcagtgccagt
cagagcagcctgcggggagcgttccccgagtgcatcctggaggactccggattcgaggag
ccccagacgttccgcacgcgctgcagcagcctggcaggaaacatgcagaggaagccgggg
gaaggcgccatcatgggccccacgcgccgccggcacgccagcgcgccgaacaacgtccag
ccgtccgattcggacaagaaccgcaccatgctcttccaggtggggcgcttcgaagtgaac
ctcatcagtcctgacagtaaaaccatggtgctggagaagaactttaaagatatctcatcc
tgctgtcagggcgttaggcagacggaccatttcggattcatctgccgggaccagtcggag
cccggccccagccagtatgcgtgctacgtgttccagtgcgccagtgaatccttggtcgat
gaggtgatgatgaccctgaagcaggccttcaccacggcggcagccttgcagagcaacaag
accccggtccagctctgcgaagcttgccccatgcacgacctgcacaagctctgcgagagg
atcgagggtctctacccgcctcgggcgaagctagccatccaaaaatacctctcccagctg
aacgacaacgagcaggcggagattttcgagcgagttcaaaaactgaagcccgggtcagac
caagaagagaacgagttggcgatcctccatctgagacagctctgtgaagccaaacaaaaa
tcccaccttcacatcggagaggcgcctcagaatgtagcgaacagcttggcaggaggagac
ggcgcggccaccggcagccgcttcaaactcgacgatctcaagaataaagcccgcacctct
ctcaccagctcactggaaaacatcttcgcaaggggtgccaaccgaatgcggggccgcttg
ggcagcatggggagcattagcagctttgaaagacaggatgaagaatctcccggtccctct
cctccgggctcccctctcgcctttcccgacgacgaccaggaatccggtcagcacttccgc
cggcgcgctcacaccttcagccacccgccggtgaggaagcgcatctcctttgagagccag
ccgaccaaccaggccaagcaggcccctctccgcagacagcactcggtcaacccagagctg
ctgcagggcagtcctgcggctgtctcgcggacgcgcagcgtttcggagagcgagtcctcc
ttcagcctcccctcctccttccctgctcccactttcctgaaaagcttttaccagggctcc
ctgagctcgctggcagacagtgggaccctcaaaagcaatggggaaggcaggaaaagaacc
ctgtctgtctgcagcaatgactcactgagtggaggtctccctcagaccccacgcagggtc
tcctggagacagaagatcttcctgagggttgcgtctcccctgaacaagccatctgcatcc
atgcagcacacagactaccctgacagcacagagctgctgccgctgtctcctcgctccttg
gaccaaggtttggaccctttgaggcgtctcttacccccggcacacgatcagtcgtctgat
aagagacctaaaaggacgggagccgactaccgggctctgtggaagaccgccatccatcag
cagatcttacttctgcgcatggaaaaggagaaccagaaactagaggcgagccgcgatgag
ctccacatccgcaaaatgaagctcaactaccaggaagtgtgccagtgctccaaggaagct
caggcactgtgggagaaaaagctgaacgctccaggcagaacgacgaacccacaagacaag
gaggaagtataccgcgtgctctgccatggggttccaaagagcaggcgcggggaggtgtgg
ttgtttctgtcccaccagcaccggctgcggcacaggctgccccaacgacagcaggcccct
gacacccactaccaagacctgctcaagcagctcactgcacagcagcacgccattctggtg
gatctaggccggaccttccccacccaccagtacttctcagcccagcttggcgcggggcag
ctctctctctacaacctcctgaaggcctactctctgctggacacagaggtcggctactgt
cagggtgtcagcttcgtggctggggttctgctgctccacatgagtgaagaacaggccttc
gacatgttgaagttcctgatgtatgacctcagcatcaggcggcagtacaggccggacatg
gtctccctgcagattcagatgtaccagctctccaggctgttgcacgactaccaccgcgac
ttgtacaatcacttcgaggagcacgagatctgcccgagcctctacgcggcgccgtggttc
ctcacgctcttcgcctcgcagttccccctcggctttgtgtctcgcatctttgattttgtg
tttgcacaggggactgaggtggtctttaaagtggccctctgtctgctgagcagccatgag
ggggagataatgaagtgtgacagcttcgagggcatcgtggactatctgaaaacgacactc
ccgacactcacacaagcacagatggagcagaccattgccaaggtcatggagatggacatc
tccaagcagctgcacgcgtacgaagtggagtacaacgtcctgcaggatgagatcctggag
acctccggaccgctgctcgacgactcggaccggctcgacaaactagaaaagacaaacgtg
cagctgaagaagcagaacatggagctgctggaaaaactccaagccgcgcggcagaagatc
cagtcgctggagacgagcgtcgacaacttcctctcccgggagagcaaaatgaagcacatg
attcgctccctggagcaggagagggtagcgtaccagaggaccatagaacgcatgcgttcg
tgccttccccccgacgccctgacagatgtggagatgacccagatcaaaacaggacccaac
gggaaagccaaaactgcagccaagaacgccaccttcagacaccgactcagagctcacact
ccaaaggagtgggagaataaacccaacttaagaagatgcagcgctgcttttcacatcttc
agctttgcaggagaactcaagtgttga
DBGET
integrated database retrieval system
