Kryptolebias marmoratus (mangrove rivulus): 108232417
Help
Entry
108232417 CDS
T05608
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108232417 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108232417 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108232417 (si:ch211-269e2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
tRNA_bind_3
PDS5
Motif
Other DBs
NCBI-GeneID:
108232417
NCBI-ProteinID:
XP_037832141
LinkDB
All DBs
Position
LG6:complement(18105821..18119501)
Genome browser
AA seq
1112 aa
AA seq
DB search
MIPEPSAAAASRSSKQNTNSHAAGTCSGAVSHSEEDSGSENRQKTRRRKRARGVPENDEG
KRARAGCSGVGRGRGGRGKQKQHVEAVTLFEVITMGKSAIEAVVDDWIEAYSADRDSSLL
DLISFFIQCCGCKGVVTAEMCQSQEDSDVRSKMVEELDEGAGLQYKRFLAFPWILTVTWP
MDADSAEYPLVQSGPPARWFHSELCDFVAALVARCQHGVLFDGYLMGGLISLLTELSDSY
VRAFRHTCTLAAVKVLSSLVAVALSLGVGVENAQKLHEVQRTKSSRQRSSQQLERIQKKL
TELQEKRAEIESMMDAIFKGVFLKRYRDMLPEIRSICMEELALWMKLYSSAFLNDSYLKY
TGWMMHDKAPDVRLKCVLGLQGLYGDPVLLPKLDLFTSRFKDRLIAMTLDKDNEVAVQTM
KLLLLISKMCDDVLTEDDYKQLLRFVYSSHRPLAATAGELLFWRYGALRPPSFPSAGFEL
CVAGFTAAEGAVMVEILAAAARQASEGPALPGRTGTKKVVSAREKKSQTDDCLKLTGHLL
TWLPRLIQKFSCSGDIVASLMKIPQFFISDCPEAENTQQVSSLLAEMAAVVDLHSAPAVL
EAAARSYLSLCGEGAAWGPAARSARDALVRRWVERLTELLRDDPFSANEEKTRELVATLR
KLGAFHNCHDLGRWGAFELLSPLLTEQSSQGGAPPEVLEEALRCLSFAVLWSLSASGEML
TCREEAVSQRLQLRLFCERSRHFLSHCELAVRLQAFLGVCDVLTAHSYQLQVWHPAGFGL
LLYTPSPKLQRALLGFVCSHVFVGSDCDSQSRESKNPEAERLEDLHRRRNALAAYCKLIV
HGVLEMSAAAEVYVHYVKYNSDFGDIMKETMCRTRQINKVESARSLVLCLQQLFVRLKRE
QKSGGGGGRAHSGVQTFTSIKELARRFALTFGDSAKFRECVVTIHRNGVEFVFQDFTQAP
GAATPPYLSYLTILSEFSGKLLKPDKKTVFSYLQKHTAEHVVNLREECWQPLVYYRASLL
AAAETEDAASHMSSDRRPYPHVRSPLSKQKAEGSKSPCQFRPADRVKVPKPSTCPSPQEK
TGDADPFSVPLEFPGAEESADEPDDGTVEVEL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgataccagagccttcagctgcagctgcatccaggtcctcaaagcaaaacactaacagt
catgcggcaggaacctgctctggagctgtcagtcactcagaggaggactctgggagtgaa
aacaggcagaagacgaggcggcgcaaaagagcccgcggcgtcccggagaacgacgagggc
aaacgggccagagcgggctgcagcggcgtcggcagagggcggggcgggcgaggcaaacag
aagcagcacgtggaggccgtcaccctgttcgaggtgatcaccatgggcaagagcgccata
gaggcggtggttgacgactggatcgaggcgtattcggcagacagagactcctcgctcctc
gacctcatcagcttcttcatccagtgctgcggatgcaaaggtgtggtcacagcagagatg
tgtcagagccaagaggacagcgacgtcaggagtaagatggtcgaggagctcgatgagggt
gccgggctgcagtacaagaggttcctggcctttccgtggatcctcaccgtcacctggccc
atggatgcagacagcgcggagtatcccctcgtgcagtccggaccgcccgcccgctggttc
cactccgagctgtgcgacttcgtggcggcgctggtggcccggtgtcagcacggcgtcctc
tttgacggctacctgatgggcggcctcatctcgctgctcaccgagctgtcggactcgtac
gtgcgagccttcaggcacacctgcacgctggcggcggtgaaggtgctgagctcgctggtg
gccgtggcgctgagcctgggcgtcggcgtggaaaacgcccagaagctgcacgaggtgcag
aggaccaagagctcgaggcagaggagctcccagcagctggagaggatccagaagaagctc
accgagttgcaggaaaagcgagcagagatcgagagcatgatggacgccatcttcaaagga
gtttttctcaagagatatcgtgacatgctgccagagatccgctccatctgcatggaggag
ctggctttgtggatgaagctctacagctctgcgttcctcaacgacagctacctcaagtac
acgggctggatgatgcacgacaaggccccagacgtgcgcctgaagtgcgtgttgggtctg
cagggtctgtacggcgaccccgtcctgctgcctaaactggatctgttcaccagccgcttc
aaggaccgtctcatcgccatgacgctggacaaggacaacgaggtggccgtccaaaccatg
aagctactgctgctcatctccaaaatgtgcgacgatgtgctcaccgaggacgactacaag
cagctgctgcggtttgtttactcctcccatcggcctctggcggccactgcaggggagctg
ctcttctggaggtacggagcccttcgccccccgtctttcccttcggcggggtttgaactg
tgcgtcgcaggtttcacggcagcggaaggcgccgtgatggtggagatcctggccgccgcg
gctcgtcaggcctcggagggaccggcgctgcccgggaggaccggaaccaagaaggtggtg
agcgctcgagaaaagaaaagccagacggacgactgtctgaagctgacggggcatctcctc
acatggcttcctcggttaatccagaagttctcatgtagcggcgacatcgttgcctccctc
atgaagattcctcagttcttcatctcagattgcccagaggctgaaaacacacagcaggtc
tccagtctgctggcagagatggcagctgtcgtggacctccactcggcccccgcggtcctg
gaggcggcggcccgctcgtacctcagcctgtgcggcgagggagcggcctggggccccgcg
gcgaggagcgctcgggacgctctggtccggcgctgggtggagcggctgacggagctgctg
cgggatgaccctttttctgccaacgaggagaaaaccagagaactcgtcgcgacgctgagg
aaactcggagctttccacaactgtcacgacctcggccggtggggcgcgttcgagctgctg
tctcctctcctgacggagcagagcagccagggaggagctccgcccgaggtgctggaggag
gcactgcggtgcttgtccttcgccgtgctctggtcgctcagcgcgagcggcgaaatgctc
acctgcagagaggaggccgtgtcccagaggctccagctgcgtctgttctgtgagaggagc
cgtcacttcctgtcccactgcgagctcgccgtcaggctccaggcgtttctgggagtgtgt
gacgtcctgacggctcattcgtaccagctgcaggtgtggcatcccgccggctttggcttg
ctgctgtacacgcccagtcccaagctgcagagggcgctgttgggcttcgtgtgctcgcac
gtcttcgtgggctcggactgcgacagtcagagcagagagagcaaaaaccccgaagcggaa
aggctggaggaccttcacagaagaagaaacgcgctcgcagcctactgcaagctgattgtg
cacggggtgctggagatgagcgcggccgccgaggtctacgtgcactacgtgaagtacaat
agtgactttggagacatcatgaaagagacgatgtgtaggaccaggcagataaataaagtc
gagagcgctcgttctctggtgctgtgtttgcagcagctgtttgtgagactgaagcgggag
cagaagagcggcggcggcggtggcagggctcactcaggagtccagactttcaccagcatc
aaggagctggcccggcgcttcgccctcaccttcggcgactcggcaaagttccgcgaatgc
gtcgtcacgattcacaggaacggcgtcgagtttgtgttccaagacttcactcaggctcca
ggtgcagctacgcccccgtacctctcctacctgaccatcctcagcgagttctccggcaaa
ctgctcaaaccagacaagaagacggtgttctcctacctccaaaagcacacggcggagcac
gtggtcaacctcagggaggagtgctggcagcccctcgtctactaccgcgcgtccttgctg
gccgcggctgaaacggaggacgctgcgtcgcacatgagctccgacaggaggccctacccg
cacgttcgctctcccctctccaagcagaaagcggaaggaagcaagtctccatgtcagttt
cgccctgctgaccgagttaaagtccccaagccgagcacctgtcccagccctcaggagaaa
acgggcgacgccgatccgttctccgttcctctggagtttcccggcgcggaggaatctgcc
gacgagccggacgacggcaccgtggaggtcgagctgtaa
DBGET
integrated database retrieval system
