Kryptolebias marmoratus (mangrove rivulus): 108232470
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Entry
108232470 CDS
T05608
Symbol
nalcn
Name
(RefSeq) sodium leak channel non-selective protein isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108232470 (nalcn)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
108232470 (nalcn)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
TraP
FAM165
Motif
Other DBs
NCBI-GeneID:
108232470
NCBI-ProteinID:
XP_017265775
UniProt:
A0A3Q2ZQK6
LinkDB
All DBs
Position
LG6:complement(17612825..17680739)
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AA seq
1794 aa
AA seq
DB search
MSWTRPDTTDKGNPLLLLDLQAFGPLSLSRISSLSLSLSLSVWLVSPPRRDLGMNAPMRS
LTIHSLYSTASPSMLKRKQSSRVEAQPMTDFGPDETLADSADIFWINKPWVHSLLRACAI
ISVISVCMNTPKTFEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIIKGDNSYVKDRW
CMFDGFMVFFIWVSLVLQVFEIAKLVDQMSPWGMLRIPRALIMIRAFRIYFRFELPRSRI
TNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFNHHCVTNETQIGNVTWNSLAIPDT
HCSNDGEGYQCPHGFKCVNLKDFGLSRQELGYSGFNELGTSIFTVYEAASQEGWVFLMYR
AIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATT
QMFHEDAAGGWQLVAVDVNKPHGRAPACLQQMMRSSVFHMFILSMVAVDVIVAASNYYKG
ENYRRHYDEFYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFESLLVVGTTLHIYPD
LYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMF
CFVEELDRFTTFPRAFMSMFQILTQEGWIDVMDQTLVAVGQMWAPVVAIYFILYHLFATL
ILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISK
LPSDFTVPRIRESFMKQFIDRQQQNTSCLFRRLPSASSSSCDHSKRSAIEDNKYIDQKLR
RSIFSNRARNLLEKETTINEILRACTTQRELSGSFEGQPAKERSILSVQHHIRQERRSLR
HGSTSQRISRGKSLETLTQDHSSTVRYRNSQKEDSEIKMIQEKKEQAEMKRKVQEEELRE
NHPYFDKPLFIVGREHRFRNFCRTIVRARFNASKTDPITGAVKNTKYHQLYDLLGLVTYL
DWVMIVVTICSCISMMFESPFTRVMHVPTLQIGEYVFVIFMSIELNLKIMADGLFFTPTA
IIRDFGGVMDIFIYLVSLIFLCWLPHDVPPESGAQLLMMLRCLRPLRIFKLVPQMRKVVR
EVLKGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPRILRRDDCHGIFRINVSVS
RNLNLKPNAEEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRV
GPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPL
HLPPRPENGGFRAKMYDITQHPFFKRGIAVLVLAQSVLLSVKWDVKDVNVTYPLATMSVV
FTLIFVLEVTMKLIAMSPAGYWQSRRNRYDLLVTSLGVIWIVLHFSLLNAYTYMMGTCVI
VFRFFTICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENIN
RHANFSTAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDKHRYWETDCGNYAGALIYF
CSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPT
SRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKS
LQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSR
FLNPPSIETTVPSEDHNANNADNPSQPEMSGLQQLLSPTLSDRGGYRQDSTDLGRPQRKL
GQWRLPAGRTSVKSIVCKMNPVSDEASSGSEVKKWWTRQLTVESDESGDDLIDM
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggacaaggccagacacgacagataagggaaaccctctactcctgctggacctc
caagcttttgggccgttatccctttctcgcatctctagtctctctctctctctctctctc
tctgtctggttggtctctccaccccgccgtgacctggggatgaacgcaccaatgaggagc
ctcacaattcactctctgtatagcacggcaagccccagcatgctgaagaggaaacaaagc
tcacgggtcgaggcccagcccatgaccgactttgggccagatgagacccttgcagacagc
gctgacatcttctggatcaacaagccatgggttcattccttgcttcgagcctgtgccatc
atcagcgtcatctctgtctgtatgaacaccccgaagacctttgagcattaccctccgctg
cagtatgtgacattcacgctggacacgctgctcatgttcctctacactgccgagatgatt
gccaagatgcacataagaggaatcatcaagggggacaactcatatgtgaaagatcgctgg
tgtatgtttgatggattcatggtgtttttcatctgggtctccctggtccttcaggtgttt
gaaatcgcaaagcttgtggatcagatgtctccatggggaatgctgagaatcccccgagca
ctgataatgattcgggccttcagaatctacttccgctttgagcttccccgttcccgcatc
acaaacattctgaagcgctcgggggaacagatctggagcgtctcgattttcctgctgttt
tttctcctgctttatggaattctgggtgttcagatgtttggaacgttcaaccatcactgt
gttacgaatgagacccaaataggaaatgtgacctggaacagcttggctatccccgacaca
cattgctcaaatgatggagaaggctaccagtgtcctcatggcttcaaatgtgtaaatctg
aaagacttcggacttagccgacaagagcttggttacagtggattcaatgaactgggtaca
agtatcttcactgtgtatgaggctgcatcacaagagggttgggtttttctcatgtacaga
gccatcgacagtttcccccgatggcgctcctacttctactttataactctcattttcttc
ttggcatggcttgtcaagaatgtgtttatcgctgtcatcattgagacttttgctgagatt
agagtccagtttcaacagatgtggggatcgaggagcagtaccacttcaactgctacaaca
cagatgttccatgaagatgccgctgggggatggcaacttgtagctgtggacgtcaacaaa
ccacatggtagagcgcctgcttgccttcagcaaatgatgcggtcgtctgtgttccacatg
tttatcttgagcatggtcgctgtggatgtcattgttgctgccagcaactattataaaggc
gagaattatcgcagacactatgacgagttttacctggcagaggttgcgtttactgtcctg
tttgacttggaagctctactgaagatttggtgtctcgggtttactggctacatcagttcc
tctttgcacaagtttgaatctctgctggtggtggggaccacactgcacatctaccccgac
ctctatcactctcagttcacctactttcaggtgctacgtgtcgtgcgtttgataaagatt
tcccctgccctagaggactttgtctataagatctttggtccaggtaaaaaactgggcagt
ctggtggtgttcacagccagtcttctcatcgtcatgtcagccatcagcttgcagatgttc
tgttttgtggaggagctggaccgttttactacctttccaagggcattcatgtccatgttc
cagattctgacccaggagggttggatagatgtcatggaccagactctggtggctgtaggt
caaatgtgggctccagttgtggccatttacttcatcctctaccatctgtttgctaccctg
attttgctgagtctttttgtggctgttatcttggacaatctggagttagatgaggactta
aagaagctcaaacagctcaagcaaagcgaagccaatgccgacaccaaagagaagctccct
ctgcggctcaggatctttgagaagttccccaacagacctcagatggtgaagatctccaag
ctcccgtccgatttcactgtgcccagaatcagggaaagttttatgaagcagttcattgac
cgtcagcagcagaataccagctgtttgttccggcgtctcccctctgcttcgtcatcctct
tgtgatcactccaagcgctcagccatcgaagacaacaagtatattgaccaaaagcttcgc
aggtcaatatttagcaatcgagcacgcaacctcctagaaaaagagactacgatcaatgaa
attctacgggcttgcaccacacagcgggagctaagcggatcctttgaaggccagccggcc
aaagaacgctccattctcagtgtgcagcaccacatacggcaagagcgcagatctctgcga
catggctccacgagtcagagaatcagccgaggaaagtcgctggagactcttacacaagat
cattccagcacagtgcgctaccgcaactcccagaaagaggacagcgagattaagatgatc
caagaaaagaaagaacaggcagaaatgaaaagaaaagttcaggaggaggagctgagggag
aaccatccgtactttgataagcctcttttcatcgtgggtcgtgagcatcgtttcaggaac
ttctgccggacgatcgttcgcgcccgcttcaatgcatcaaaaactgatccaataacagga
gcagtgaagaacaccaagtaccatcaactgtacgatctcctgggcttagtcacctatctg
gactgggttatgattgtagtgaccatctgctcctgcatctccatgatgtttgagtcaccc
ttcacccgggtcatgcacgtccccactctgcagatcggggagtatgtgtttgtcatattc
atgagcattgagctcaacctgaagatcatggccgacggtctgttcttcacccccacagcc
atcatcagagactttggaggagtgatggacattttcatctatcttgtgagtttgattttc
ctgtgctggctgccccatgacgtcccccccgagtcgggagctcagcttctgatgatgctg
cgctgcctacgtccgttaaggatcttcaagctggttccccagatgagaaaggtggtgcgg
gaggttcttaaaggatttaaggaaattttcctggtttccattctgctcctcacgctgatg
ctggtgtttgcaagcttcggggttcaactgtttgccggaaagctggccaagtgcaacgac
ccccgtattctcagacgggatgattgccacggtattttccgaataaacgtcagcgtttcc
agaaacctgaacttgaagccaaacgctgaggagaagaagcctggcttctgggtaccaaga
gtttgggccaacccccgaaattttaactttgacaatgtaggaaatgccatgttggctctg
tttgaagttctgtcactcaaaggctgggtagaagtccgagatgtcattattcaccgcgtt
ggaccgattcacggcatctacatccatgtgtttgtgtttctgggatgcatgatcggactt
actctgttcgtcggagtagtcattgcaaacttcaatgagaacaaaggtaccgccctgctg
acagtggaccagcgaagatgggaggatctaaaaagccgactgaaaatagctcagccgctc
cacttgcctcctcgtccagagaacggaggatttcgagccaagatgtatgacattactcag
caccccttcttcaaacgaggcattgctgtgctggtgttagcgcaatctgtcttgctttca
gtcaagtgggacgtaaaagacgtaaacgtgacatatccacttgccaccatgtctgtagtc
ttcaccttaatatttgtattggaggtgacgatgaagctgatcgccatgtcaccggcaggt
tactggcagagccgacgaaatcgttatgacctgttggtcacgtcactgggcgtcatctgg
attgttctgcacttttccttactgaatgcatatacatacatgatgggcacgtgtgtgatc
gtcttcaggttcttcacaatatgtggcaaacatgtgacgctgaagatgctgctgctgacc
gtcgtcgtgagcatgtacaagagcttcttcatcatcgtgggcatgttcctcctcctcctc
tgctacgcttttgctggagtcgttctctttgggaccgtcaaatatggagagaacatcaac
cggcatgccaacttctccacagcgggcaaagctatcactgttctcttccggatcgtcaca
ggggaagattggaataaaatcatgcatgactgcatggtccagcctccgttctgcacccca
gataagcatcgctactgggagactgactgtggcaactatgctggagcgcttatttacttc
tgttctttttatgtcatcatagcctacattatgctcaacctacttgtagccatcattgtg
gagaatttctccctgttctactccaccgaggaggaccagctgctgagttataacgacctg
aggcacttccaaatcatctggaacatggtggatgacaaacgggagggtgtgatcccaaca
tccagagtgaagtttctgctccgtctgctcagaggcaggctggaggtggacctggataag
gacaagttgctgtttaaacacatgtgctatgaaatggagcgacttcacaacggaggagac
gtgaccttccacgatgtgctcagcatgctgtcatatcgctcggtggacattaggaagtct
ctccagctggaggagctgttggccagggaacagctggagtacaccatcgaagaggaggtt
gccaagcagaccatacgcatgtggctcaagaaatgcctcaaacgcatccgggcgaagcag
cagcagtcgtgcagcatcattcacagcctgagagagagccagcagcaggagctgagccgc
ttcctcaaccctcccagcatagaaaccacagtgccaagtgaagaccacaatgctaacaac
gcagacaacccctctcagcctgagatgagtggtctccagcagcttctgagccccacgttg
tcagacagaggaggctacaggcaggactccacagacctgggaagaccgcagagaaagctg
ggacagtggcggctgcctgcaggtcgcacgagtgtgaaatctatcgtgtgtaagatgaac
ccggtcagcgacgaggcttcctcggggtcagaggtgaagaagtggtggacccgtcagctg
acggtggagagcgatgagagcggcgacgacctcatagacatgtag
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integrated database retrieval system
