Kryptolebias marmoratus (mangrove rivulus): 108232510
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Entry
108232510 CDS
T05608
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108232510
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
108232510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Rrn6_K-rich
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
108232510
NCBI-ProteinID:
XP_017265862
UniProt:
A0A3Q3F2M6
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All DBs
Position
LG10:12828542..12830654
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNAGGNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSALLLQGNMSH
PGASSYPMSGLGAPQPVHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatattaccgtccttcggcttcacgcaggagcaagtggcgtgcgtctgcgaggtg
ctgcagcagggaggaaacctggagaggctcggccgcttcctgtggtctctgcccgcctgc
gaccacctccacaagaacgaaagcgtcctgaaagccaaggcggtggtcgccttccaccgg
gggaacttcagggagctctataagatcctggagagccaccagttctcgccgcacaaccac
ccgaagctgcagcagctgtggctgaaggcgcactacgtggaggcggagaagctgcgcggc
cggccgctcggcgccgtcgggaagtaccgggtgcggaggaaattcccgctgccccgcacc
atctgggacggcgaggagacgagctactgcttcaaggagaagtcccggggcgtcctgagg
gagtggtacacgcacaacccctacccgtccccgcgggagaagagggagctggccgaggcc
acggggctgaccaccacgcaggtcagcaactggttcaaaaacagacggcagagggacaga
gccgcagaggccaaggagagagagaacagcgaaaacaacaacgcgggcggcaacaaacag
aaccagctctccccgctggatggaggaaagtctctcatgtccagctcggaggacgagttt
tctccaccccagagtcccgaccagaactctgcgcttttgctccagggcaacatgagccac
cctggggcctcctcgtaccccatgtccggcctgggggccccacagccggtgcacggcatg
cacggacacccacaccaactgcaggactccttgttgggacctctaacctccagtcttgtg
gatttgggctcttaa
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