Kryptolebias marmoratus (mangrove rivulus): 108232520
Help
Entry
108232520 CDS
T05608
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108232520 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108232520 (pou2f1b)
03021 Transcription machinery [BR:
kmr03021
]
108232520 (pou2f1b)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108232520 (pou2f1b)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
108232520 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108232520
NCBI-ProteinID:
XP_017265873
UniProt:
A0A3Q3EEW3
LinkDB
All DBs
Position
LG6:15247693..15262454
Genome browser
AA seq
710 aa
AA seq
DB search
MADGGAASQDESSAPDTKVKLETTKYEMESGEGNTGIQTNGLDFQRQTVPTTIANALPPS
FLQQSKSEDSGALPTSVQQSVLPQTQLMLAGGQIAGLTLSPAQQLLLQQAQAQLLAAAVQ
HSASQQNSTTGANISATAATPITQLPLSQPIQIAPQLQPQGLSLPQFVLVQSGHPIAAPL
QPTQFIISQTPPAQQGILQPQSLLTQLPQSQANLHPTQPSITLATQPASPSRTTAVTNIQ
TLPHSQTPPKCLDTPTLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFS
QTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLTSDQALSSPSVLGSPGMGMEGIN
RRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKR
INPPSSGNTPMKTIFTPSSPLVASTASFVSSPTINTSTTLTVNPVMPLTSTSVSSLTFTG
TTVGATNTASVISTAPVVTTSTCSPSISPSTTTVPSSSTDSKATIQTIVSQAPTSVATSL
GTGQVMVAASGLSAALQGAAQLSTSSSFAAMAAAAAGLNPSLMTSSQFAPGGALLSLAPG
GLGSALSPALMSNNTLATIQALASGGTISLPSLDASNLLFTNTSAASTPSLVTTPLFLSP
QNLSLLTSNPVSLLSAGTGGLQVTADAHHQAASAAVPVQTSTITTASKAQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagcaccagatactaaagtgaag
ttagaaactactaaatatgaaatggaaagtggcgaagggaacaccggaatccaaaccaat
ggattggactttcagaggcagacggtgccgaccacaattgctaatgcccttcccccctcc
ttcctccaacagtctaagtctgaagactcgggtgctcttccgacctccgtccagcagagc
gtactgcctcaaacccagctaatgttggccgggggacagattgctggcctgacgctgagc
ccagcccagcagctgttgcttcagcaggcccaggctcagctcctggctgcagccgtgcag
cactcagccagccagcagaacagcaccaccggggccaacatctcagccacggcggccaca
ccgattacccagctgcccctgtcgcagcccatccagatcgccccccagctacaaccacaa
ggtctaagcctgcctcagtttgtcctggttcagtctggccaccccatcgctgcgccactg
cagcccacccagtttatcatctcacagacgccgccggcccaacaaggcattttgcaaccc
cagagtcttcttactcaactacctcaaagccaagctaaccttcatccgactcagccaagc
atcaccctcgcaactcagcctgcatctccatcccgcaccacagcagtcacaaacattcag
accctgccccacagtcagacaccacccaaatgcttggacacccccaccctggaggagccc
agtgatctggaggagctggagcagtttgccaagactttcaaacagcgacggatcaaactg
ggcttcactcagggggacgtcggcctggccatggggaagctgtatggaaatgacttcagc
caaactaccatctctcgctttgaggccttgaatctgagctttaagaatatgtgcaaactc
aagcctttgctggagaagtggcttaatgatgcagtttgtgcagagaacctgacatctgac
caggccttgtccagcccaagtgtcctgggctctccgggcatgggcatggaggggatcaac
cgcagacggaagaaaaggaccagtatcgagaccaacattcgagtggccttagaaaagagc
tttctggagcagaaccaaaaacctacctctgaagagatcacgatgatcgctgaccagctc
agcatggagaaggaggtgattcgggtctggttctgcaatcgccgacagaaagagaagagg
atcaatccacccagcagtggcaacacccccatgaaaaccatctttacccccagtagccct
ttggtggcgagcacagctagctttgttagcagtccaactattaacacatccaccactctg
actgtaaacccagtgatgcctctcaccagcaccagcgtctccagtttgactttcacaggc
acaaccgttggagccacaaacactgcatctgtcatttccactgcacctgtagtcaccaca
tcgacctgctctccgtctatcagtccgtctacgacaactgttccgtcctcgtccacagac
agcaaagccaccattcagacgattgtctcgcaagctccgacatctgtagctacgagttta
ggcacgggccaggtgatggtggcggcctcgggcctctccgcggcgctgcagggggctgcc
cagctgtccaccagttccagctttgcagccatggctgctgctgccgcggggctcaacccc
agcttgatgacgtcgtcccagttcgctccagggggtgccctcctcagtctggctcccggg
gggctcggcagtgcgctcagtcctgctctcatgagtaataacaccctggctactattcaa
gcgctggcatcgggcggcacgatctccctcccgtctctggacgctagcaacctgctgttc
accaacacgtcagcggcgagcacgcccagcctggtaaccacgccgctcttcctgagcccc
cagaacctgtcgctgctcaccagcaaccccgtcagcctgctgtcggccgggacgggcggg
ctccaggtcaccgccgacgcccaccatcaagccgcctccgctgccgtgcctgtgcagact
tcgaccattaccactgcctccaaggctcagtga
DBGET
integrated database retrieval system
