Kryptolebias marmoratus (mangrove rivulus): 108233012
Help
Entry
108233012 CDS
T05608
Symbol
sars1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108233012 (sars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kmr01007
]
108233012 (sars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108233012 (sars1)
Enzymes [BR:
kmr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
108233012 (sars1)
Amino acid related enzymes [BR:
kmr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108233012 (sars1)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108233012 (sars1)
Prokaryotic type
108233012 (sars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
108233012
NCBI-ProteinID:
XP_017266660
UniProt:
A0A3Q3FBK2
LinkDB
All DBs
Position
LG8:complement(26670077..26676558)
Genome browser
AA seq
517 aa
AA seq
DB search
MVLDLDLFRTDKGGDPEIVRETQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKAKNLC
SKSIGEKMKRKEPVGDDESVPEEVQNLEALTAETLSALTVTQIKKVRLLVDEAVEKTDKE
RMKLEAERFEYLREIGNLLHPSVPISNDEDEDNKVERTWGDCSVQKKYSHVDLVVMIDGF
DGERGAVVAGSRGYFLKGPLVFLEQALINYALRILYSKHYTMLYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKTSEKSDDSSIDEKYLIATSEQPIAAFLREEWLKPEDLPIRYAGFSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAEEFYQSLGIPYR
IVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLKIRYGQTKKMMDKA
EFVHMLNATMCATTRVMCAILENYQTDEGIVVPEKLREFMPPGLNEIIKFVKPAPIDQEA
SKKAKKQQEGGGKKKKQGGGGEANLPNAMESMSVNDS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgacttggacttgtttcggaccgacaaaggcggcgaccccgaaatcgtccgt
gagactcagaggaagaggttcaaagatgtaactctggttgacaagctggtcgccgcagac
acggagtggagaaaatgccgcttcactgcagacaacctcaacaaagccaagaacctctgc
agcaagagcatcggggagaaaatgaagaggaaggaaccagttggggacgatgagtctgta
ccagaggaggtgcagaacctggaggctctgacagctgaaacattatcggccctgacggtt
acacagatcaaaaaggtgcgcttgcttgtggacgaagctgtggagaaaactgacaaggag
aggatgaagctggaggcggagaggttcgagtacctgagggagatcgggaacctcctgcac
ccgtctgtacccatcagcaatgatgaggatgaagacaacaaggtggagcgtacctggggg
gactgcagtgttcagaagaaatattctcatgttgacctggtggtcatgatcgatggtttt
gatggggagaggggagctgttgtggctgggagcagaggctacttcctaaagggccctctg
gtgttcctggagcaggctctgatcaactatgccttaaggatcctgtacagcaaacactac
accatgctgtacacgccgttcttcatgaggaaagaggtcatgcaggaagtggcccagctc
agccagtttgatgaagagctttataaggtgatcggtaagactagcgagaagtcggacgac
agctccatagatgagaaatatctcatcgccacctccgagcagcccatcgcggccttcctg
agggaagagtggctgaagcccgaggacctgccgatccgctacgccggcttctccacctgc
ttcagacaggaagtgggctcccatgggcgggacacccgcggcatcttcagggtgcaccag
ttcgagaagatagagcagtttgtctatgcctccccacacgacggtaaatcctgggagatg
ttcgatgagatgatcggaacagcggaggagttctaccagtcgctgggaattccttatcgt
atcgtcaacatcgtctccggcgccctgaatcacgcagccagtaagaagctggatctggaa
gcctggtttcctggctcgggtgccttcagagagctggtctcctgctcaaactgcaccgac
taccaggccaggcgtctcaagatccgctacggacagaccaaaaagatgatggacaaggca
gagtttgtgcacatgttgaacgcgaccatgtgtgcaacgacacgcgtgatgtgcgccatc
ctggaaaactaccagacagatgaaggcatcgtggttccagagaagctcagggagtttatg
cctccaggtttaaatgagatcattaagtttgtgaagccagcccccatcgatcaggaggcg
tccaagaaagccaagaaacagcaggaaggaggagggaagaagaagaagcagggaggagga
ggagaagcaaacctgcccaacgccatggagagcatgtccgtcaacgattcatag
DBGET
integrated database retrieval system
