Kryptolebias marmoratus (mangrove rivulus): 108233106
Help
Entry
108233106 CDS
T05608
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108233106 (soga1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108233106 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
TSC22
Motif
Other DBs
NCBI-GeneID:
108233106
NCBI-ProteinID:
XP_017266810
UniProt:
A0A3Q2ZML0
LinkDB
All DBs
Position
LG8:23102187..23178612
Genome browser
AA seq
1890 aa
AA seq
DB search
MTKTKEVDVHNSPTHFFASSKERRLHLRQKMESGGGTESSDSGQAQHAVPGQPPPTARSE
AAEPPAGLRAQPTAEKKKINRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGAIHLGSR
ISRRSPVGSLAGKDSKAERGGGKTAGKSSLSGGSLSKSSKAAKSASGRRKVSDAGSVGSD
DLSKDSGCAAGKLSPTDSSSELSDCASEENKLSADAASSDAESRSSRGPDGEKPLREGFQ
QAARTTCSSAERTDKDRLSLSIEAGEGSTSPGEERSATSFDSRVPASTSLAFSDLTEEFT
DGMYEEYLREIEELRSENDYLKDEMEELRSEMLEMRDMYLEEDVYQLQELRQQLEQANKT
CRILQYRLRKAERRSLRVAQTGQVDGELIRTLEQDGKVAKDVSIRLHSQLESVEKKRSLL
EQENEDLRVRLQELEVAKQVLQQEVDKNSQKKRGARTGNKADKKPAAQEDSSDLKCQLHF
AKEESALMCKKLTKLVKDSEAMKEELAKYRSLYGDVNASLTVEEVADSPHTREAEIRVHL
KLVEEEANLLSRRIVELEVENRGLRAEMDDMKGTQDGPQDLTGVGGSPGAGLGLTGGAAV
LGGGASSENVMELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRYKSELPPAASTLS
SNSLMSLTDGLLNDSPSHSIQEGAVLISTDALTHEEELRVARLQIGELSGKVNKLQYENR
VLLSNLQRCDLASYHVPSSSSSSSSLRLALETDAEAGDSAECLPFSSPHRKEPVGGENEA
LEIDEQKKRVEDNADPTTSLPGCLGQKDHDALLAMRDQARLVSTAIQLLTSPESNCLSSS
PSVYHKVCNNEAAEPCDLEKPQISELSDLRDHPLVGALTSRLQALHSQLQAFVEQVDGLG
KAPSSGRDAQLEGASPPPSPCASIPCSGDGQDQENRAEEKQPDYRDQSEPDVNDGSKDGS
HSVSNESQNQHRSQMEPEKEADHALAGVHLSKAEESLQETQEELENERQNYKEISLKLFQ
IQEEHQKALLRRDFQLQSLDLQARLQQKLWTQERTLLVQESQHLKQALLLLSLKLRCFLK
QWRLGCKKDAEWKDVLEMNSLNDLYVLLEDENLSSPTTQTDKRGSADEQPLSPTIKSSAV
SSTLADLRVALQDLSAEVRQERQGSQELTQQFAKAKASWEVERTELKSLITQLESKAGKA
TAALSSSEALDPIDLKVALKKEREEHQHLLAESYTAVMDLTKQLQIGERNWSREKLELLE
RFSQERAQWEQRVREEKSKPPGDESAADTAVTNGSALPRIKSTLELEGPDCNQTDSQEEK
AQFDASLFCTHTELGHMTRKNWTYLSNETPEIMDTCKTWDGPSGSHSSSITSQPDLEYVQ
RSYTAPDRTGIRIYYSPPAVRRMEHRRRSRETTDLHHIQTGSFSLEHNDTDTGLAALNTA
DSQHQQPASAFTSSYEQWLSSLSKQHRELLESRSSCISSSMPSIIINSVGSGAANRVVDG
MTSTSPFHNLEIGEISANLSDDMKEMTNCVRQAIRSSSLERKSSKEPGSQAVGVCTRSTQ
TAAQSVSIGLQTETFPSSRATGLHTKAWSPRPSSTTSSSLASARTRQISTSLDKVHSRIE
RPCCSPKYGSPKLQRRVSSGSTSRLDGTSSNRDRSLWSLQQRSMSGGGGSAWARSTTTRD
SPVLNGLTDGLSSLFSVVEHSGSTESLWRSEMGPSQTASPARQPPAAGKPSGATVCGSDS
SSQKYGGLVQEFFRNVCSSRSPGGVPLPGEKTQRDSLGSPGGAGVLGSFGSMDEPKPDCV
LVGSNDNVTRIVNKRFMRQTAGEEMISIMGGGKETSNAVAAGAGVEDAPCDCTAQSPCFP
QPSRAAARHCKHRPQESPAALGEKGDTCNE
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccataactctccgactcacttcttcgcctcgtcc
aaagaacggagactccatctccgacagaagatggaaagcggaggcgggacggagagctcg
gacagcggccaggcgcagcacgcggtgcccggccagccaccgccgacagcccggtctgaa
gctgccgagcccccggcggggcttcgagctcagcccacggccgagaagaagaagatcaac
cgggcaccgtccccggccagaccgaaggatgtgcccgggtggtcgcttacaaagatccga
ggagggatcgggaccccgacgctgagcgtcaagcccggagccatccatctggggagccgc
atttccaggcgcagccccgtgggaagcctggcagggaaggacagcaaggcggagagaggc
ggcggtaagacggcgggcaagtcctccctctccggcggctcgctgtccaagtcctccaag
gcggcgaaaagcgccagcgggcggaggaaggtgtcggacgccggcagcgtagggtccgat
gatctatccaaggactccggctgcgccgccgggaagctctccccgaccgacagcagctcc
gagctgtcggactgcgcctccgaggaaaacaaactctcggcggatgctgcgagcagcgac
gccgagtcgaggagcagccggggtccggacggagagaagccgctcagggagggctttcaa
caagctgccaggaccacctgctcctccgccgagaggaccgacaaggatagactctctctg
agcatagaggccggggaggggagcacttcccccggcgaggagcgctcggccacctcgttt
gacagcagggttcctgccagcacctccctggccttctcagacctcacagaggagttcacg
gacggcatgtatgaggagtacctcagggaaatagaagagctcagatctgagaatgattac
ctcaaagatgagatggaggagttgaggtctgagatgctggagatgagggacatgtacttg
gaggaagatgtttaccagctgcaggaactgcgacaacagctggaacaggcaaacaagacc
tgccggatcctgcagtaccggctaaggaaagcagagcggcgctctctccgagtggcccaa
acgggtcaggtggatggagaactgataaggacgctggagcaagatggaaaagtggcgaaa
gacgtgtccatccgtctccacagtcagctggagagtgtggagaagaagaggagccttctg
gagcaggagaacgaagacctgagagtccgtctgcaggagctggaggttgccaaacaagtc
ctgcaacaagaggtggacaagaactcccagaagaaaagaggagcacgaaccggcaacaaa
gctgacaagaagcctgctgcacaggaggacagctccgacctgaagtgtcagctccacttt
gccaaagaggagtcggctctgatgtgcaagaagctgaccaagctggtgaaggacagcgag
gccatgaaggaggagctggccaagtacaggtcgctgtatggggacgtcaacgcctcgctt
accgtggaggaggttgccgactccccgcacacccgtgaagcggagatcagggttcacctg
aagctggtggaggaggaggccaacctgttgagtcgacgcatcgtggagctggaggtggag
aacagaggcctccgggcggagatggacgacatgaagggaacacaagatggccctcaggat
cttacaggtgttggtgggagcccgggggcagggcttggcctcacaggcggggccgcggtg
ctcgggggaggagcttcatctgaaaacgtcatggagctccagagacacctgcagtttgtt
gaggaggaagcagagcttctgaggaggtctctgattgagatggaggaacagaacaaactc
ctgatgaacgagatcaaccgctataagtctgagctcccacccgcagcgtccacgctgtcg
tccaattcactgatgtccctgacagacgggctgctcaacgacagcccctcgcactccata
caggaaggggcggtgcttatcagcacagacgccctgacccacgaggaggagctcagagtg
gcgaggcttcagattggagaactgagtgggaaagtgaataagcttcagtacgagaaccgc
gttcttctgtccaacctgcagcgctgtgatctcgcttcctatcatgttccttcctcctcc
tcctcctcctcctcattaagactggctctggagacagatgcagaggcaggagactcggct
gaatgcctccccttcagctcgccccatcgcaaagagcctgtggggggagagaacgaagcc
ctggagatcgatgaacagaagaagagggtcgaggacaacgctgatccaacaacttcgctc
cccgggtgcctggggcagaaggaccatgatgccttgttggccatgagggaccaggctcgt
ttggtttccactgcgatacagctactgacctcccccgagtccaactgcctgtcctcgtcc
ccttcagtgtatcacaaggtctgcaacaacgaggcagcagagccgtgtgacctggagaaa
cctcagatttcggagctgtctgatctgagagaccaccctctggttggtgctctgaccagc
aggcttcaggccctgcactcccagctgcaggccttcgtggagcaggtagacggcctgggt
aaagctccatcaagtgggagggatgcccagttggaaggtgcttcccctccaccctcccct
tgcgcctccatcccctgctctggagacggccaggatcaagagaaccgagcagaggaaaag
cagcccgattatagggaccaatcagagccagacgtgaacgacggatctaaggacggcagc
cactctgtcagcaacgagtcgcaaaatcagcaccgcagccagatggaaccggagaaggag
gcagatcatgcgttggctggtgtccacttgtccaaagctgaggagtcacttcaagaaact
caggaggagctggagaacgagaggcagaattacaaagaaatcagcctcaaactcttccag
atccaggaggagcaccagaaggccttactgcgacgggacttccagctgcagagtctggac
ctccaggctcggcttcagcagaagctgtggacccaggagaggactctgctggtgcaggag
tcccagcaccttaaacaggctctgttgctgctcagcctcaaactccgctgcttcctcaaa
cagtggaggctgggctgcaagaaggacgcagagtggaaggatgttctggagatgaacagc
ctgaacgacctgtacgtgttgttggaggacgaaaacctgtccagccccacgacccaaacg
gacaagcggggttctgcggatgagcagccgctcagtccaactataaagtcgagtgctgtg
agcagcactttggcggacctgcgggttgcgctgcaggatttgagcgcagaggtgaggcag
gagagacaaggctcccaggaactcactcagcagtttgccaaggccaaggcatcatgggaa
gtggagaggaccgagctgaagagcctcatcacacagcttgagagcaaagcaggcaaagcg
acagcagccctgtcctccagcgaagcactggaccccatcgacctgaaggtggcgctcaaa
aaggaacgtgaggaacaccagcacctcctcgctgagtcctacacagctgtgatggacctc
actaaacagcttcaaatcggggagaggaactggagcagggagaagctggagctgctggag
aggttcagtcaggagagagctcagtgggagcagagagtgagggaggagaagtcgaagccg
ccgggtgatgaatcggccgcggacacagctgttactaatggatcagcattaccaaggatc
aagtctacactagaactggagggcccagattgcaaccaaactgacagtcaggaggagaaa
gcccagtttgacgcctcccttttttgcactcacaccgagcttggtcacatgaccaggaag
aactggacctacctgagcaatgagactccagagatcatggacacttgtaaaacctgggat
ggtcccagcggctcacacagcagctccataacatctcagcccgatctggaatatgtgcag
cggagctacactgctcccgatcgcaccggtattcgtatctactacagccccccagctgtg
aggcgcatggagcaccggagaaggagccgggagaccacagatcttcatcacatccaaact
gggagcttctcgctggaacacaacgacacagacactggtttggcagcactgaacaccgct
gacagtcagcaccaacaacctgcgtccgcttttacttcttcctatgagcaatggctgagc
tcgctgtccaagcagcaccgagagctgctggagagcagaagtagctgcatttccagttcc
atgcccagcattattattaacagcgtgggcagtggggccgctaacagagtggttgatggg
atgacgtccacttctccgttccacaacctggagattggagagatttcagccaacttaagt
gacgacatgaaggagatgactaactgcgtccgtcaggccattcgctcttcttctctggag
aggaaatccagcaaggagcctgggagtcaggctgttggtgtgtgcaccaggtcgacacag
actgcagctcagtccgtcagcattgggcttcagactgagacgtttcccagcagcagggcg
acaggactacacaccaaagcttggtctcctcgtccttcatcaacaacctcctcctcgctg
gcgtcggcccgaactcggcagatctcaacgtctctggataaagttcacagccgtattgag
aggccgtgctgctcgcccaagtatggatctccaaaattacaacgcagagtgtcgtccggc
tccacctccagactggatgggacgtcctccaacagggaccgcagcctgtggagcctccag
cagagatccatgagtggaggtgggggttctgcgtgggcccgctccaccaccacgagggac
agccccgtcctgaatggcctcaccgatggcctctccagccttttcagtgtggtggagcac
tctggaagcacagagtcactttggaggagtgaaatgggacccagccagactgccagccca
gctcggcagcctcccgctgcaggaaaaccctccggagcgacagtctgtggatcggactcc
agctctcagaagtatggagggctggtacaggagttcttcaggaacgtctgcagcagtcgt
agcccaggaggagtccccctgcctggggagaagacacaaagagactcccttggcagccct
ggaggtgcaggtgttttggggagtttcggcagcatggatgaacccaaaccggactgtgtt
ttggtgggaagcaacgacaacgtgaccaggatcgttaataagaggtttatgagacaaaca
gctggggaggaaatgatcagcatcatgggaggagggaaggaaacgagcaacgccgtggct
gcaggagcaggggtggaggatgcaccctgtgactgcactgcccagtccccctgcttcccc
cagccatcaagagcagctgctcgccactgcaagcaccgcccacaagagtctccagctgca
ctgggggagaagggagacacctgtaacgagtga
DBGET
integrated database retrieval system
