KEGG   Kryptolebias marmoratus (mangrove rivulus): 108233162
Entry
108233162         CDS       T05608                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108233162 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:kmr03041]
    108233162 (bcas2)
   03400 DNA repair and recombination proteins [BR:kmr03400]
    108233162 (bcas2)
Spliceosome [BR:kmr03041]
 Complex B
  Other components
   Prp19 complex
    108233162 (bcas2)
 Complex C
   Prp19-CDC5 complex
    108233162 (bcas2)
DNA repair and recombination proteins [BR:kmr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    108233162 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile Beta-prop_NUP159_NUP214 THOC7
Other DBs
NCBI-GeneID: 108233162
NCBI-ProteinID: XP_017266924
UniProt: A0A3Q3A6H8
LinkDB
Position
LG8:complement(24325644..24328486)
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLPTPDFSA
FETEIMRNEFERLGARQPMELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGNNAWKVYNDNLAFMIEMAQKELHKFRKQIQDLNWQRKNDQLAAGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVALLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccgggacggcgtcggtggctggtgaagtctttgtcgatgctttgccgtattttgac
caaggttacgacgctgcaggtgtgagagaagcggctgcagcgttggttgaagaggagacc
agaaggtaccgacccacgaagaactacctgagctacctgccgacacctgacttctccgct
ttcgagacagaaattatgaggaatgaatttgaacggttaggagctcgtcagcccatggag
cttctgagcatgaaaaggtatgagttgccagcgccttcatcgggacagaagaacgacatt
acggcgtggcaggagtgtgtgaacaactccatggctcagctggagcaccaggcggtccga
atcgagaacttggagctcatgtcgcagtatggaaacaacgcttggaaagtctataacgac
aacttggcttttatgattgagatggctcaaaaagaacttcacaaattcagaaagcaaatt
caagacttgaactggcaacgtaagaatgatcagctggcggcgggagccaaactccgagag
ctggagtccaactgggtgtcactcgtgagtaaaaactacgagatcgaacgggccatcgtg
caactagagaacgaagtcgctctgctccgacaacagcagggagacgagaacaaggagaac
atccggcaggacttttaa

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