Kryptolebias marmoratus (mangrove rivulus): 108233393
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Entry
108233393 CDS
T05608
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108233393 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108233393 (nup43)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108233393 (nup43)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108233393 (nup43)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108233393 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD_LRWD1
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_2nd
PSII_BNR
KNTC1_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
108233393
NCBI-ProteinID:
XP_017267306
UniProt:
A0A3Q3BKK8
LinkDB
All DBs
Position
LG19:complement(4244920..4250313)
Genome browser
AA seq
371 aa
AA seq
DB search
MESAKYVSQKVSKTRWRPVSYSSLQQPDIFATGSWDNEDNKISIWSIGNHHGSPGLEDGF
EGDPQLICDFKHDGDVLDLQFLDQEKIVTASSTGAVTIFRHHQNSQTISVSQRWARAHRY
PCDNAPCTGVVCSSPEIVSVGEDGRIIVFRADQEGVTRVIENADSSTIHAVTYLRTTEIL
TVNSIGQLKLWDLRQQSSSPSQILSLSGDRVPLYCVDRHPNQQHIVATGGQDGMLCIWDV
RQGNVPSSLMEAHSAEMWEVHFHPTNPDHLFTCSEDGSLLHWETSSHADMPSFLQGGRTS
SMASWGAVTPAGGNQSLISAWLSRDSGKSRLETTHMLPSQTLSVNSLDVLGQCLVCGTDG
EAIFVNRQVPV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgctaaatacgtgtcccaaaaagttagcaagacaagatggcgcccagtgtcg
tattcatctttacaacagccggatatttttgcgaccggatcgtgggacaacgaggacaac
aagatatctatttggtccattggtaatcatcatggcagtccaggtctggaggatggattt
gaaggagacccgcagcttatttgtgactttaagcatgatggagatgttcttgaccttcag
tttttggaccaagagaaaattgtcacagcgtcgtcaacgggagccgtcaccatcttccgc
caccaccagaacagtcagacaatctcagtttctcagcgctgggcgagggctcaccgttac
ccctgtgacaacgctccctgcactggagtcgtctgcagcagtccagaaatcgtttccgtc
ggagaggatggcaggattattgttttcagggccgaccaggaaggagtgactcgggtcata
gagaatgcagacagcagcacaatccacgcggtgacgtatctgaggacaaccgagattctg
acagtgaactccatcgggcagctgaagctgtgggacttgaggcagcaaagcagctcgccc
tcgcagatcctgtccttgtcaggagacagagttcccttgtattgcgtggacagacatcca
aaccagcagcacatcgttgccacaggaggccaggatgggatgctctgcatctgggatgtg
agacaaggcaacgtgccctcctcactcatggaggcccactcagctgaaatgtgggaggtt
cacttccaccccaccaaccccgatcatctgttcacctgttcagaggacggctctctgctg
cactgggagacttcgtcccacgcagacatgccctccttcttacaaggcggcaggaccagc
agcatggcgtcttggggtgccgtgacccccgccggcgggaaccagtccctcatcagcgcc
tggctcagcagagactccggtaaaagccgcctggagacgacccacatgctgcccagccag
acgctgtccgtcaacagcctggacgtgctgggacagtgcttagtctgcgggactgacggg
gaggccatctttgtcaacagacaggtcccggtgtaa
DBGET
integrated database retrieval system
