Kryptolebias marmoratus (mangrove rivulus): 108233444
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Entry
108233444 CDS
T05608
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b isoform X1
KO
K12822
RNA-binding protein 25
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108233444 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108233444 (rbm25b)
Spliceosome [BR:
kmr03041
]
Complex A
U1 snRNP components
U1 related factors
108233444 (rbm25b)
Complex B
108233444 (rbm25b)
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
PhetRS_B1
Motif
Other DBs
NCBI-GeneID:
108233444
NCBI-ProteinID:
XP_017267400
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All DBs
Position
LG19:complement(6881839..6893555)
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AA seq
831 aa
AA seq
DB search
MSFPPHLNRPLLPPPGIPPQYAGFPSGAPMIPVHMGLMAPTPAVMVQSVPVVSKPPVPKK
DLSALRAKDDESSGPTTTVFVGNISEKASDMLIRQLLAKCGIVLSWKRVQGASGKLQAFG
FCEYKEPESTLRALRLLHDLQIGDKNLLVKVDAKTKSQLDEWKAKRRTANGTKKAEGGGG
EEEEEVLDEETKRKDQIVKEAIEGLMREYAAELNAPSQDEESQRRKRKKEKKEEDDINTI
DIEEDKRDLISREISKFRDTHKKLEEEKDKREKERLEFERERREREKERERERERRDRER
EKERERERERERERERERERDKDRDRKTRERERERERDWDRDRSRDRSNDRSRSRELSRD
REREKKRDQEDEEEAYERRKLERKLRDKEAAYQERLKNWELRERKKARDYAKEAEREDER
RREMVKEGKRLKEFLEDYDDDRDDPKYYRSFNTAAMRADVFSATPRGSALQKRLRDREKE
MEADERDRKREKEELEEIRRRLLDEGHPDPDAELRRMEEEEEERLRQPPIIPEPEPEEQR
DRHRSSRDHRERRQEPEKVEPRSRPSHSDEEMEEGEEEDYDNEEENPNVKPQLKPTMRPI
TAAPSVSSASGNVSPNTPGDESPCGIIIPHENSPPDALPQEEHRPKIGLSLKLGATGSPS
QPNVGKRKKLPVDSVFNKFDDEEADEQPRKRKLVPLDYDDEKSLGVDGAGLSSIKGGNAE
EKHKHIKSLIEKIPTAKPELFSYPLDWSMVDTTLMERRVRPWINKKIIEYIGEEEPTLVD
FVCSKVMAHSMPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccctcctcatttaaaccggccgctgttgcctcctcctgggattcctcctcag
tatgctggtttcccctcaggagctccgatgatcccggtccacatgggcctaatggccccc
acccctgcagtcatggttcagtctgttcctgtcgtcagtaagcctcccgttccaaagaaa
gacctttctgctttgcgagccaaagacgatgagagcagcggccccactaccactgtgttt
gttgggaacatatcagaaaaagcttctgacatgctgatcagacagttgctggcgaaatgc
ggtattgttttgagctggaagagagttcaaggagcctctggcaagcttcaagcctttggt
ttttgtgaatacaaagagccagagtccaccttgcgagctctgcggttgcttcacgacttg
cagattggagacaaaaacctgctagtgaaggtggacgcaaaaactaaatctcagctggat
gagtggaaggccaagaggaggaccgctaatgggactaaaaaggcagagggaggtggagga
gaagaagaggaagaggttcttgacgaggaaacaaagaggaaagatcagattgtcaaagag
gccattgaggggttgatgcgggaatacgccgcagaactgaacgctccctctcaggatgaa
gagtcccagcgacgaaaaagaaaaaaggaaaagaaagaagaggatgacattaacaccatt
gacattgaagaggacaagagagacctgatttccagagagattagtaaatttcgtgacact
cacaagaaactggaggaggagaaggacaagcgggaaaaggagcggctggagttcgagcga
gagaggagggagcgcgaaaaggagcgcgagcgcgaacgggaacgccgggaccgcgagagg
gagaaggagcgagagcgggagagggagagggaaagggagcgagagcgggagagggaacgg
gacaaagaccgcgaccgcaagaccagagagcgagagcgggagcgagagagagactgggac
agggacaggagccgcgacaggagcaacgaccgcagccgatcaagagagttgagtcgtgac
agagagcgagaaaagaaacgggaccaagaggacgaagaggaggcttacgaacgcaggaag
ctggagagaaaactccgagataaggaggcagcataccaagagcgcctgaaaaactgggag
ctgagggagaggaagaaggccagagattatgccaaggaggccgaaagagaagacgagcgc
agacgagaaatggtaaaagaaggcaaacggttaaaagagtttcttgaagactacgatgat
gacagagatgatcccaagtattacagatcattcaacactgcggctatgagggctgatgtt
ttctctgcgacccctaggggcagtgcgctgcagaaacgtctcagagacagagagaaggag
atggaggcagacgagcgtgacaggaagagagagaaggaggagctggaggaaatcagacgg
aggctgctagacgagggacatccagacccagacgcagagctgcgcaggatggaggaggaa
gaggaggagcgactgagacagccccccatcatcccagagcctgaacccgaggagcagcgc
gaccgccacaggagttcgcgagaccaccgggagcgcaggcaggagccggaaaaggtagag
ccccgctcgcggcccagccactccgacgaagagatggaagagggtgaggaggaggattat
gacaacgaagaagaaaaccccaatgtaaagccacagttgaagcccacgatgcggcccatc
acggctgcaccctctgtgtcatcggcgagcggcaacgtgtctcccaacactccgggagac
gagtcgccctgcggcatcatcatccctcacgagaactctcccccggacgctctgccgcag
gaggagcaccggccgaagatcggcctcagccttaaactgggtgctacaggaagccccagc
cagcccaacgtgggcaagaggaagaagttgccggtggacagcgtcttcaacaagtttgac
gacgaagaggccgacgagcagccacgcaagcggaagctggtgcccctggactacgacgac
gaaaagagcctcggcgtggacggcgccggcctctccagcataaagggaggcaacgctgag
gagaaacacaaacacatcaagagcctgatcgaaaagatccccacagcgaaacccgagctg
ttctcttacccactggactggtctatggttgacacgacattaatggaacgacgggtccgg
ccctggatcaataaaaaaatcatagagtacatcggcgaggaggaaccgacattagtggac
tttgtgtgctccaaggtgatggctcacagtatgccacagagtatcctggatgatgtcgct
atggttctcgatgaagaagctgaagtcttcatagtaaagatgtggcggctacttatttat
gaaaccgaagcgaagaaaatcggactggtgaaataa
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