Kryptolebias marmoratus (mangrove rivulus): 108233461
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Entry
108233461 CDS
T05608
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108233461 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108233461 (capn3b)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
108233461 (capn3b)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C2: calpain family
108233461 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
Noelin-1
Mad3_BUB1_II
Motif
Other DBs
NCBI-GeneID:
108233461
NCBI-ProteinID:
XP_017267441
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All DBs
Position
LG19:7512116..7525818
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AA seq
769 aa
AA seq
DB search
MGDEKSAGRVPVDEETKVKLLHDTEASLEPDGNVDYGATGSNSIYSAILSRNEAVKDAKR
LKTFLELRDKYVKKNVVFEDPLFPANDSSLFYSQKPLMKFEWKRPSEICENPQFIVDGAN
RTDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWIDVI
VDDRIPTCNNQLVFTKSFRNNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
YFELSNAPADLYGIMKKALQRGSLMGSSVDVSSASSMESRTEQGLVRGHAYSIIALEECD
EVSKDTKIRLIRLRNPWGWVLWKGPWSANSKEWSTISTADRENLKKQTVETSEFWMSFED
FKRSFTKLEMCNLTPDTLQGDERNSWTVSVHEGRWVRGSSAGGCRNCPDTFWTNPQYRLQ
LYEDDDDPEDGQVVCTVVVALMQKGRRMQRHKGLKFLTIGFSIYEVPKEFEGQDQHLAKD
FFLYTASKAKCKSYINLREVTERFRLPPGAYVILPTTYKPHEEGEFILRVFSEKQNTSEE
TDGTIDQTQQDKKMKSKPIVFVSDRARANKEIEHEGIQGDRKKKPKLKLLQPEEETEEEK
NFRAIYKQIAGEDMEICANELKTIMNNVLSKHKEIKTDGFSIETCRSMIALMDTDGSGKL
HFQEFKHLWKKIKEWQLIFKRFDKDKMSSISSFEMRNAVNDAGFQLNKQLYDIIAMRYAD
EHLNIDFDSYICCFVRLEGMFRAFKAFDKDGDGLIKLNVLEWLQLTMYS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgagaagagcgccgggagggttcctgtggatgaggaaacgaaggtgaagctg
ctgcacgacaccgaggcgtcgctggagcccgacggcaacgtggactacggcgccacgggc
tcgaactccatctactctgccatcctgagcagaaacgaggccgtcaaggacgcaaagcgg
ctgaagaccttcctggagctgcgagacaagtacgtgaagaagaacgttgtgtttgaagac
cctctgttccctgcgaacgactcctcgctcttttacagtcagaaacccttgatgaagttc
gagtggaaacgtccctcggaaatctgtgaaaaccctcagtttattgtggatggggccaac
agaacggacatctgtcagggagaactgggtgactgctggctgctcgccgccatcgcctgc
ctgacgctgaacgagaagctgctgtacagagtgattcctccagatcagagcttcactgag
aactacgccgggatcttccacttccagttttggcgttacggcgagtggatcgacgtgatt
gtggacgatcgcatcccgacctgcaacaaccagctggttttcaccaagtctttcagaaac
aacgagttctggagcgctctgctggaaaaagcctacgcaaagctgcacgggtcctacgag
gcacttaaaggggggaataccctggaagccatggaggattttaccggtggagtgactgag
tatttcgagctgtccaacgcgcccgcggacctctacggcatcatgaagaaggcgctgcag
agaggctcgctgatgggcagctctgtggacgtgtcttcggccagcagcatggagtctcgg
accgagcagggcctggtcaggggtcacgcctactccatcatagctctggaagagtgcgac
gaggtttccaaggacaccaaaatccgcctgattcgattgcgcaacccctggggctgggtg
ctctggaagggaccctggagtgccaactcgaaggagtggtcgaccatctccacggcagac
agggagaatctgaagaagcagaccgtggagacgagtgagttctggatgtcctttgaggat
ttcaagaggagtttcacgaagctggagatgtgcaacctgacgcccgacacactgcagggc
gacgagaggaacagctggacggtgtctgtccacgagggtcgctgggtgagaggcagctct
gctggcggctgcaggaactgcccagacacgttttggacgaaccctcagtatcggcttcag
ctgtacgaggacgacgacgaccccgaggatgggcaggtggtctgcactgttgtcgtggct
ctgatgcagaaaggacggaggatgcagcgtcacaaaggcctcaaattcctcaccatcggc
ttttccatctacgaggtaccgaaggagttcgaagggcaggatcagcatctggccaaagac
ttcttcctctacacggcctccaaggccaaatgcaagtcctacatcaacctgcgggaggtg
acggagcgtttccgcctgccccccggggcgtacgtcatcctgcccacgacctacaagccc
cacgaggagggagagttcatcctcagggtcttctctgagaagcagaacacgtctgaagaa
acagatggcaccatcgaccaaacgcagcaggacaagaaaatgaagagtaagcccattgtg
tttgtgtcggacagagcgcgggccaacaaagagatcgagcacgagggcatccagggcgac
aggaagaagaaacccaagctgaagctgctgcaacccgaggaggaaactgaagaggaaaag
aacttcagggccatttacaaacagattgctggggaggacatggagatctgtgcaaacgaa
ctgaagacgatcatgaacaacgttctgtccaaacacaaagaaataaagacggacgggttc
agcatcgagacgtgtcgaagtatgatcgccttgatggacactgacggatctgggaagctg
cacttccaggagttcaaacacttgtggaaaaagatcaaggagtggcagctcatcttcaag
cgtttcgataaggacaagatgtcctccatcagcagtttcgagatgagaaacgcggtcaac
gatgcggggtttcagctgaacaaacagctgtacgacatcatagccatgcgctacgccgac
gaacacctcaacatcgattttgacagctacatctgctgctttgtcagactggagggcatg
ttcagagcttttaaggctttcgacaaagacggcgacggattaattaaactcaacgtcctg
gagtggcttcagctgaccatgtactcttag
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