Kryptolebias marmoratus (mangrove rivulus): 108233557
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Entry
108233557 CDS
T05608
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03272
Virion - Hepatitis viruses
kmr04382
Cornified envelope formation
kmr04514
Cell adhesion molecule (CAM) interaction
kmr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108233557 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108233557 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108233557 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108233557 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108233557 (cldn5a)
04147 Exosome [BR:
kmr04147
]
108233557 (cldn5a)
Cilium and associated proteins [BR:
kmr03037
]
Other cilia and associated proteins
Stereociliary proteins
108233557 (cldn5a)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108233557 (cldn5a)
Exosomal proteins of colorectal cancer cells
108233557 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
108233557
NCBI-ProteinID:
XP_017267594
LinkDB
All DBs
Position
LG1:complement(24456330..24458199)
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AA seq
215 aa
AA seq
DB search
MVSAGLEILGLSLCVIGSLLVMVACGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALSHDLQAARALTIISSVMGVLGLMVVIAGAQCTNCIRTEYVKARVVNA
GGIIYIISGLFVLVPLCWMANKIISDFYNQQVPAPQKREIGAALYIGWAAAALLLIGGTL
LCCSCPSSGNSGYSVKYAPTQRATQNGDYDKRNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggccggactggagatcctggggctgtcgctgtgtgtcataggctcgctcctg
gtgatggtcgcgtgcgggcttcccatgtggaaggtgacggcgttcatcgaagccaacatc
gtggtggcgcagaccatctgggacggcctgtggatgtcgtgcgtggtgcaaagcacgggc
cagatgcagtgcaaggtgcacgactccgtcctcgcgctgagccacgacctgcaggcggcc
agggcgctcaccatcatctcctccgtgatgggcgtgctgggcctcatggtggtgatcgcg
ggcgcgcagtgcaccaactgcatccgcacggagtacgtcaaagcgcgggtggtgaacgcc
ggcgggatcatctacatcatcagcggcctcttcgtgctcgtgcccctctgctggatggcc
aacaagatcatctcggacttctacaaccagcaggtgcccgcgccgcagaagagggagatc
ggcgccgcgctctacattggctgggcggccgcggcgctgctgctgatcggagggacgctg
ctgtgctgctcctgtccctccagcgggaactctggatactctgtgaaatacgcaccgacc
cagagagccacgcagaacggggactacgacaaaaggaattacgtgtag
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