Kryptolebias marmoratus (mangrove rivulus): 108233628
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Entry
108233628 CDS
T05608
Symbol
cspg4b
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
kmr00535
]
108233628 (cspg4b)
04091 Lectins [BR:
kmr04091
]
108233628 (cspg4b)
Proteoglycans [BR:
kmr00535
]
Cell surface proteoglycans
Others
108233628 (cspg4b)
Lectins [BR:
kmr04091
]
C-Type lectins
Others
108233628 (cspg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
DUF7522
SIT
ECSCR
Motif
Other DBs
NCBI-GeneID:
108233628
NCBI-ProteinID:
XP_017267690
UniProt:
A0A3Q3EZR0
LinkDB
All DBs
Position
LG1:complement(25177163..25200731)
Genome browser
AA seq
2413 aa
AA seq
DB search
MEPAGNKTKKKKLWLHGPPLLLLLLWWSLLVELASGASFYGDGFVQLKATESSDHNMLRV
RFRTSSTNGLLFLAAGQANYFLLELHAGRLQVKLDLGSGDQVLESDQGIQLNDLAWHSVE
VHHARSNVTLTVDKNSHTSIKMPGPYHNLNIIDGLYVGDSGGLDKVYLPRDLKGFRGCMD
EVVFNKHDLLSSLRPYTGHRHVYEVSLGCSPEFFAAKEDPVSFFSSRAYVSLPTWTIHQE
AIFQCVVHTSAKEGIILYSSAREGGFVALEIQEGFPVAIVGKGGVKTELRSQTFINDKKW
HSVKLRFSPRSLDLTVDEEIVKSSISSHLKRLHLKGYLFVGGIDDGTRSEVRKAGLVSVS
GRRVRGGSFKGCLKDIEVNRVKMGLSNASVTKDISVGCEPEKPPEPSTSVNPTSTPKPLF
HLITPTPSLHMSTLAVGLDRRYGTNFLQLKNLVVQEGGRASLEAKHIKIFLDFKKLGIRQ
SQIVFRIQEQPIRGQIRLDVDQDQEENTFSMLDLWHGRVMYVHGGSEEPDDFFMFSIFCS
SRKQVPDYLKDSKLYQYNVTVTPTNDAPELSLPEGNLFVLLENSKKLLTSDVLQVTDIDS
NYTDLVFSVLGNLNVNAGYLEIDSNPGKAVSSFSYADLDELRVFYVHTGVRNSRIVLRVS
DGEKVSNTVVLRIMAVALQYKVANNTGLGIIQGETAVIGSKQLAVQTNAVKQVVDVRYDI
TEPPQFGELQRLHSSGEWRQTESFSQRLLEKERLRYVNTFQDIQTSNVTDYFKCKVIVAA
RANTEIVFPITVSWIKYQLVKNVMMNMDKVRKVSLSSECLYARAEGVALSDDELYFRVLT
TPKKGRLLLDTAVLTKNSTFSQKDLTDKKVHFELVDRPHEDTTDRFKFQLVSKHAQSEHY
DFQFSIKADVNSVFMKNTGLLLKEGESKLITKDELFAESLKTKNMFYTVVRSPRHGKLAR
ISQSNSNASYDNIFTFSNQDILQERLMYIHDDSETTQDEFTFIASTNQGFKSAIEEDEIG
SKEGTFNISIQLLNDQKPIRIIDKVFHVVRDGQKLLTTEDLRYHDADSDFDDGQLIYTRR
GIPMGDLVLVNDTAHRLFQFQQKDLEERRVLFIHKGVGTGRFVLFVSDGKHFVSSLLDVS
AHDPFLKVANNTGLLVQKGQSVTFSNSNFSIASNLDLRDDKEVVFKLDEAPKYGALYLNK
TIVESFTQFDLKNGWISYRHNDSKHLSDFFNLTVKAKGLQLAERVSVKVYLESHQRPPIV
QHLESLLVEEGKPVKIDETKLEVTHEDNLPSEIAFAVRVAPSHGFLRCFVEAEERYIGSK
QSPVRTFTQHDINSGNIQYVQVEPKKLNDTIILDATNGVTDVTNIRVSVDIIPLLIPLHV
ANFTLIEGASKALTQDVLKVTNRHFSGINFFYNVTESPHHGHIEHSRYPGVPITTFTRRQ
VEHEFIYYVHDSSETLTDNFTVVANDTGLRKQSAAQTVYIKVTAVNDEPPVITTNRVLRV
WVSSVTEIRPKDLQAQDLDSPPEGIHFMVTPPSNGHLALKSNPMKAVLNFTQTHIDQGQL
LFVHKGAMSGGFNFQVNDGVNFSPRQIFSITAKALVLSLEKNLPLKVFPGSSRPLTNEEL
QAVTNDISNTSNRVITFSVTRRPKLGRLVKRLPDNMTEDISTFTQEMVDRKEVVYIQSPI
ESVGWEAMDSMTFSVSSPPASIESQTFKIDISYENTGPEHNTVLLANTGAEVTEGKNVVI
DEFKLDASNLMSKLPNPERSSHEVWFQVTTLPQRGVLIVGERNLTKEKPNFSQFIVSKYG
ITYKHDNSETTRDSFVFSAWLNPKGRTAQRPQDEKDIVVEHFNITITPVNDQPPVLRNKT
PSLKVIQGDRVTLGPENLKVEDLDNPPEDIKFSVVSQPNNGYLALVGHLNESVVAFTQAQ
INNRSICFVHDGSSVSGVFYFSVTDGHHKPIYKLFNIHVSEITINLVNYTEVSLQQGTTS
VALTQDNLAAATNGKDVTIYYKVTRPPNFGKLLMENQEVVLFKQEDLQAGRLFYHMTVLS
SSEDSFEFTAFTSEANLTSQVLNITVRPLIQVGKGLRIPNGVSVKLSSSVFNVSDLARLS
DSDPVFKVICHPKHGKVVQTKRKITKRVLPVDSFTFQEMMQEKVALELNANMTGVEELND
SLVFVLKADNIQPAKGELHFTIVPYDPVAFPTTKSPVLTTSPLPLTPVKSSRNGSSSPAP
STVLLSTQQPIKNQHKFKGRNRWGNSNRTNFLGTTLGKPSQTEEFPFRNTPVRVESYPQK
TSNPLLIILPLLALLLLIIIFVVLVVYFRHHRQRKQSSASPQEPPSAGSSNSQFYNGQPQ
RSTAVPTVTVTPLSPTGHGSPVLDRLLTQNQDSLYDTVDSKVLISSWSDGSPVPCSQVIR
TTAPTLQKNQYWV
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgctgggaacaaaaccaagaagaagaagttgtggctccacggtcctcctctt
cttcttcttcttctttggtggtcgctgctggtcgagctggcgtcgggagcctccttctat
ggtgatggcttcgtgcagctcaaggccacagagtcgtcggaccataacatgctccgtgtt
cgctttcgaacctccagcaccaacggcctgctgtttctcgctgctggccaggccaactac
ttcctgctagagcttcatgccggccgcctgcaggttaaactggaccttggatcaggggac
caagtgttagaatcagaccaaggcatccagctgaacgatttggcctggcattccgtagaa
gtccaccacgcgaggtcaaatgtcactctgactgttgacaaaaactcccacaccagcata
aagatgccaggtccctatcacaatctcaacattattgatggtctttatgttggagactct
gggggcttagataaagtctatctacctagagacttaaagggcttccgaggctgcatggat
gaggtggtcttcaataagcatgacttgctgtcatcactgagaccatatactggacacaga
catgtctatgaagtgtctttaggctgcagcccggagttcttcgcagccaaggaagatcct
gtcagcttcttcagctccagggcttatgtttctcttccaacttggactattcatcaagaa
gctatatttcagtgtgttgtgcacacttcagccaaagaggggattattctgtacagttca
gccagagaagggggattcgttgctctggagatccaagaaggttttccggtggccattgtt
gggaaaggtggagtcaagactgagttacgttcacagactttcattaatgacaaaaaatgg
cattctgtcaagctgcgttttagtcccagaagtcttgacctaacagttgatgaagaaata
gtaaaaagcagcattagctcccatttaaagaggcttcacctcaaaggttatctttttgtt
ggaggtattgatgatggcaccaggtcagaagtcagaaaagcagggctcgtctctgtatca
ggaagacgtgtcagaggaggttcctttaaaggatgtttaaaggatattgaagtaaataga
gttaagatgggtctctctaatgcatcagtcactaaagatatctcagttggctgtgaacca
gagaaaccaccagagccatcaacctctgtgaatcccacaagtacaccgaaaccccttttt
catttgataacaccaactccatcccttcacatgtctacccttgcagttggcctggaccga
aggtacggcacaaactttttgcaacttaaaaaccttgtggtccaggagggaggcagagca
tctctcgaggccaaacacatcaagattttcttggactttaagaaacttggcattcgacag
tctcagattgtgtttagaattcaagagcaaccaatcagaggtcagataaggctcgatgtc
gatcaagaccaagaggagaacaccttcagcatgctggatctttggcatgggagagtgatg
tacgtccatggaggctcagaggaaccagatgacttctttatgttttcaattttttgtagt
agtagaaagcaagttcctgattatttgaaggacagcaaattataccagtacaatgtaact
gtaacacccaccaacgatgcacctgaactgagtcttcctgaaggaaatctctttgtcctg
ttagagaactctaagaaacttctcacctcagatgttctgcaagtcacagatatagacagc
aactacaccgacctcgtcttctctgtgcttggaaatctgaacgtcaatgccggctatttg
gaaatagatagcaaccccggcaaagcagtgagctcattctcatacgcagacttggatgaa
ttaagagtgttctacgttcacacaggggtgagaaactcaaggatagtgctcagggttagt
gatggggaaaaggtcagcaacactgtggttttaaggatcatggctgtagcactgcagtac
aaggttgccaacaacaccgggcttgggatcattcagggtgagacagctgtaattggttca
aagcaattggcagtgcaaaccaatgctgtgaaacaagttgtagatgtccgatacgatatc
accgaacccccacagtttggagaactccagagacttcactcaagtggggaatggaggcaa
actgaatcattttcacaaagacttttagaaaaagagcgccttagatatgtaaacaccttt
caagacattcaaacttccaatgtcactgattatttcaagtgcaaagttattgtagctgca
agggcaaacactgaaatagttttcccaattactgttagctggataaagtatcaactggtg
aagaacgtaatgatgaacatggataaagttagaaaagtgtcactaagctctgagtgcctt
tatgccagagctgaaggcgtggccctctcggatgatgaactgtattttcgggttctcact
acaccaaagaaagggaggctcctgcttgataccgcagtcttaacaaagaactcaaccttc
agccaaaaagatctgacagataaaaaggtccactttgagcttgttgataggcctcacgaa
gacacaactgacaggttcaaatttcagctggtgtctaaacacgctcagtctgaacattat
gattttcagttttccatcaaagctgatgtcaacagcgtgtttatgaaaaatacaggactc
ttgcttaaagagggagaaagtaaacttatcactaaagatgagctgtttgcagagagttta
aaaacaaagaatatgttctacacagtcgtaaggagccccagacatggaaagctggcccgc
attagtcagtcaaactctaatgctagctatgacaacatcttcacctttagtaaccaggat
atattgcaggaacggttaatgtacatccatgatgacagtgaaacaactcaagatgaattt
actttcatagcctctaccaaccaaggattcaagtctgccattgaagaagacgaaattggc
tccaaagaaggaacatttaacatatctattcagctactgaatgaccaaaagccgatacgt
atcattgataaagttttccacgtagtcagggatggacagaagttgctcactacggaagat
ttgcgttatcatgatgctgactctgacttcgatgatggccagctcatctacactcggcgg
ggaatcccaatgggagacctcgtgttggtcaacgacacagcccatcggctgttccagttt
cagcagaaggatttggaggaaagacgagtgttgttcattcacaaaggcgtgggcaccggg
agatttgtgctgtttgtctcagatgggaagcattttgtgtccagccttttggacgtcagt
gctcatgatcctttcttgaaggtggctaacaacactggcctgttggttcagaaaggacaa
tcagtgactttttccaacagcaatttcagcattgcatcaaatttggacttaagagatgac
aaagaggtcgttttcaagttggatgaggctcccaagtacggagctctttatctgaataaa
acaatcgtggagtcgttcacgcagtttgacctaaaaaatggatggatctcctatcggcac
aatgacagcaaacatctgtcagactttttcaacctgacagtgaaagctaaaggtcttcag
cttgcagagagagtcagtgtcaaggtttatctggaaagtcatcagaggccacccattgtt
cagcatctagagtctttactggtggaagaaggaaaaccagtgaagattgatgaaactaaa
ctggaggtcacacatgaggacaacctgccatctgagattgcgtttgcagtcagggtagcc
ccatctcacggctttctcaggtgttttgtagaagcggaggagcgctacatcggaagcaaa
cagtcgcctgtcaggacgtttacccagcacgacatcaacagcgggaacatccagtacgtg
caggtggagccgaaaaaactcaacgacaccatcatcctcgacgccaccaacggggtcact
gacgtcaccaacattagggtgtctgttgacatcatcccgctccttatcccgctacacgtc
gctaatttcactctgattgagggcgcctcgaaggcactgacccaggacgtgctcaaagtc
accaaccgacacttttctgggatcaacttcttttacaacgtgaccgaatcgccgcatcat
ggccacatagagcactctcgataccccggtgtgcccataaccactttcaccaggaggcag
gtggagcatgaattcatttactacgtccacgacagcagcgaaaccctcactgacaatttc
actgtggtggccaacgacacaggcctgaggaagcaaagtgcagcccagaccgtttacatc
aaggttactgccgtcaatgatgagcctcctgttattacaaccaacagggtcctcagggtc
tgggtgtcatcagttacagaaatcagaccgaaggacctgcaagcacaggacctggattca
cccccagagggaatacacttcatggtgacccctcccagcaacggacacctggccctgaag
agcaaccccatgaaggcggtgctgaacttcacacagacccacatcgaccagggacagctg
ctgtttgttcacaaaggtgccatgtctggaggattcaacttccaagtcaacgatggtgtg
aacttctctccaaggcagatttttagcatcaccgccaaagccttagttctcagtttggag
aaaaacctcccactcaaagtgtttccaggttcttctagaccactcaccaacgaggagtta
caagctgtgaccaatgacatcagcaacacctcaaaccgagtcattactttcagcgtgacc
cggcgtcccaagctggggcgtctggtgaagaggctgcctgataacatgacagaggacatc
tccactttcacgcaggagatggtggacagaaaggaagttgtttacattcaaagtcccatt
gagtctgtgggctgggaagccatggactccatgaccttttctgtgtcatcaccgcctgct
tctatagagagtcagaccttcaaaattgacatctcctatgaaaatacaggacctgaacac
aacacagtcctccttgcaaacacaggtgctgaggtgacagaaggcaagaatgtcgtcatt
gatgagttcaagctggatgcttcaaacttaatgtcaaagctgccgaatccagagaggagc
tcccacgaggtctggtttcaggtgacaacactgcctcaacgcggcgttcttatagtaggg
gagagaaatctcaccaaagagaaacccaacttctctcagttcattgtcagcaaatacggc
atcacctacaaacatgacaactcagagacgacccgtgattcttttgtgttcagtgcttgg
cttaatcctaagggtagaactgcacaacgccctcaagatgagaaggatattgttgtggaa
cattttaacatcacaatcactcctgtaaacgatcagccacctgtcctgagaaataaaact
ccaagtctgaaagtaatacaaggggatagagtaactctcggaccagaaaatctcaaagtt
gaagacttggacaatcctccggaggatattaagttctctgtggttagccaaccaaacaat
ggttacctagctcttgtaggacatttgaatgaatcagtagtggcctttactcaagcccaa
atcaacaacagaagtatctgttttgttcacgatggaagttctgtctcgggcgtgttttac
ttcagtgtcacagatggacatcacaaaccgatatataaactgtttaacattcatgtgtca
gagatcaccatcaatctggtcaactacactgaagtatcactgcaacaaggcacgacctcg
gtagctctgacccaagacaaccttgctgctgcgaccaacgggaaggatgtcaccatttac
tacaaagttacaaggcctccaaactttggcaaacttctgatggaaaaccaagaagtcgtg
ctgtttaaacaagaggatttacaagctggaaggttgttctaccacatgaccgttctttcc
tcctctgaggacagctttgagttcactgccttcacttcggaggcgaatcttaccagccaa
gttctcaacataaccgtcaggcctttgatccaggtcggcaaaggtttgagaattcccaat
ggggttagtgtcaaactcagctccagcgtttttaatgtctctgatttggctcgtttgagt
gacagcgaccctgtctttaaagttatttgccatcctaagcatgggaaagttgttcagacg
aaacgtaaaatcaccaaaagagttctaccagttgactccttcacatttcaggaaatgatg
caggagaaggtagcactggagttgaatgccaacatgacgggagttgaggagctgaacgac
tctctggtatttgtactgaaagctgataacatccaacctgctaaaggggaactccacttt
acaatcgtgccgtatgatccagtagcttttccaaccacaaaaagtcccgtcctgaccaca
tccccccttcctctgacaccagtcaaatcatctaggaatggaagttcttcccccgccccg
tctacggttctcctctccacccagcagccaatcaaaaaccagcacaaattcaaaggacgc
aaccgctgggggaactcaaacaggaccaacttcttgggcacgactctcggcaaaccgtct
caaacggaggagtttccgtttcggaacacgccagtccgagtagagtcctaccctcaaaaa
acctccaacccactcctgatcatcctgccgctgctggccctgctgctgctcataatcatc
tttgtggtcctggtcgtctattttcgacaccacaggcaaaggaagcagagcagtgcttca
ccacaggagccgccttccgctggatcttcaaacagtcagttctacaatggccaaccccag
aggagcacagcagtccctacagttaccgtcactcctttgagccccaccgggcatgggagc
cctgttctcgacaggttgttgacacagaatcaggactcactttatgacacagttgattca
aaggtacttataagttcttggagtgatgggtcccccgtaccatgttcccaggttattaga
accactgctcccactctgcagaagaaccagtactgggtatga
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integrated database retrieval system
