Kryptolebias marmoratus (mangrove rivulus): 108233629
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Entry
108233629 CDS
T05608
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108233629
Membrane trafficking [BR:
kmr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108233629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
Ank_2
PHD_2
C1_2
SOS1_NGEF_PH
Ank_5
PHD
PH_13
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
108233629
NCBI-ProteinID:
XP_017267692
LinkDB
All DBs
Position
LG1:24839628..24879067
Genome browser
AA seq
1851 aa
AA seq
DB search
MELSRRKVPLYGEAKVFALLEGLDSVPEDAEVYVVLEGSTLVHVTRAQNDVMLCFIVPGH
NLAEEVSVQAYLCSETTPLTWVGGTLLEYVHDDAQDLAEYIIIHGHCLSSTDHQQLSSLF
SPGQESSRWAVDHKVALAMANLDIPPKWNVLGSHSGDEHSPRESPLHLAVRWGLYRLAEL
LLCQPGGLMAINLPNEDGVTPLQLAEAAGNSELLELLTHPPNPLATPPAGLSQVWADRSR
LLRFCHDTGNLTLTVRQNLRWSSEESRHADILLLRDRLRDENFLRGIKALRRERVETISE
KEELVDDPADTALYPDIIEENFVEDNVPSFFSEDCEEPLMFGLNEDDEEEDEEDDSSRSD
SEKSQSIRESQASSPTLAAAARLSAMIHGKDQVYANAMLVDQVDDSDVKYRSLGEEEEIG
PASPVGMSCWDSFSSTPFDSESSSQNRSHSSPHHGPRGSQGRGPDNHKEANPRISPPSPS
FPSSPLASAARLFEGAQRRQTHAGPPVSPALKHRGCSLTEANRTLSPSLECDSGEEDILG
HSYPSSVIKQRSILQSSSGEERDSFDTSPDFNRSHSDSTHKSNQSSEDVEVRLRSYSYSS
PKAKPSRPLLNRDTAITDLEEGPFSSSGRSLLQALSLSKSLSRLNQVKQRAFNLTETPRE
KRVLGFRKRAQSAEEESTASHQHLTLTEFLKEIEDEEWDRYIIPSKVESEKYKVSRTFSF
LKSRMSSTRSKTKVKGKEVKEGKSAAANGHQFVPVSPSGSSPCVACEKSVFGKELLQCSN
CFLSVHKSCRESVAACGKKPQERNAVLMKSKTMSLPQNFVKENSSAFSSSSPSSSSSVST
VTREGKRETVTSFSKSQSISIDSRGLSETAGADGEFSMTACTNSSLCEEGTPVTTTPLSI
DLPVSPKDSVDALLLSDLSADLLGLEAELWSLTVSPEFCRQHDRRTIKRQNVIYELMQTE
LHHIETLTVMSEVFRRGMLEELQLDWDCVARIFPSLDPLLLFHRNFFRAMQERRQAATQM
DNSQNYLIHQIGDILLQQFSDENAEKMKQVYGKFCSHHIEAVNVFKELQQQNKKFQNFVR
QQSNNSLVKRREVPECILLVTQRITKYPLLLERIIQYTQEGSQEHADLSSALAQIRDIIA
AVDLTVSKYERSQELQEVLTRLETKSFAKLKNGKVFRKQELHSKHRDLHHKGLVFWKTAT
GRLKDTLALLLTDVLVFLQEKDQRFVFASVDQKPPVIPLQKLIVREVANEERGMFLISAS
SVGPEMYEVHTTTKEERNAWMRHIRQAVESCPEEEEEEERTAETEEARQAAELRVQTINK
FQDTLFGQDQQICQSLEEKLQLYAELTELTLHPPEPVPHRHLLVQPAQYIDSETPRQASS
LLTAALREAENLISILQARDGLSVQSQNSPVQAPECCSYNSHGSSIQESPSEPDYLSTLS
MSSTSLGSDSDLTGLDSVSWSSAVEFRKGDTKGTLLKVAESVQSLTQLLYSLQAAVTLQD
SFYEVHKLLLQEGERPQLRSLASLQSSLELEKQRSSDKMKEEKRSLERRKEDVDEVQKLQ
TKLKQEQQHWEKECVAREKQQGDQENLLEQREQQCLLETERLRCEREELEAQLQEYQQNL
DRLKEGQRSVEREKEKIEAQQRLLQSWRHSRQSSLPVTIPLDGYKLSQVCTHSRSGSLDA
NCSVFKNEAALLASLQQNHLHQPTNYNNQQQHVLSMQKKNHDFPLNSSAHTANPSLSASL
YNSLNTLLSQTHNRQPPYGNNHSCSRFPTDSLHLFSSRVPSQTQRTNNRDLSLLGNTQSS
SSWRSEFTGHGLNKEHNSSSPSLTPLLPPQAYLSLDGQNGEEGGEENIVYL
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggaactgagcaggaggaaagtgcctctgtatggggaggcaaaggtatttgctctgttg
gagggcttggactcagtgccagaagatgctgaggtttatgttgttttggaaggatccaca
ctggtccatgtaaccagggctcagaatgatgtcatgctctgcttcatcgtgcctggccat
aatctggctgaggaggtctctgttcaggcctacctgtgctctgaaaccacgcctctcacc
tgggtaggcgggactttattagagtatgtgcatgatgatgctcaggatctggcagagtac
atcataatccacggacactgtctgagctccacagatcaccagcagctcagcagcctcttc
agtccggggcaggagagctctcgttgggctgtggatcataaagtggctctggccatggcc
aacctggatattcctccaaagtggaacgttctgggcagccacagtggggacgaacacagt
cccagagagtctcctctccacctggctgtgagatggggtctgtatcggcttgcagagctc
ttgctttgccagccgggggggctgatggccatcaatctgccaaacgaagacggagtcaca
ccactgcagctggcagaggccgccggcaactctgagctcctggagctgctcacacatcca
cccaaccccttagccacccctccagcaggtctgtcccaggtgtgggcagatcggtctcgc
ttgctgaggttctgccacgacacggggaacctgactctgaccgtccgacaaaacctgagg
tggagctcagaggagagccggcatgccgacatcttgctgctcagagacagactcagggat
gagaacttcctcagagggattaaagcgctcagaagggaacgtgttgagaccatttcagaa
aaagaagagcttgtggatgatcccgcagacaccgcactgtatcctgatataattgaagaa
aactttgttgaagacaatgtgcctagtttcttctccgaggactgcgaggagccgctgatg
tttggcctgaatgaggacgatgaagaggaggacgaagaggacgactcatcgcggtctgac
tctgagaaaagtcagtccatcagggagagccaggcctcgtccccgactctggctgctgcc
gccaggctgtcggcaatgatccacggcaaagaccaagtgtacgccaacgccatgttggtt
gatcaggtggatgactctgatgttaagtatcgctctctaggagaagaggaggagatcggc
cctgcgtcccctgtaggtatgtcctgctgggattctttctcttcgaccccctttgactca
gagagctcctctcagaaccgttcccactcgtcaccccatcatgggccgaggggaagtcag
ggccgagggccagacaatcacaaggaggcaaaccctcgcatctctcccccttctccgtct
tttccttcctctcctttggcttccgccgcccgtttgttcgagggagcgcagaggcgtcag
actcacgcgggccccccggtctctccagctttgaaacacagagggtgcagcttgacagaa
gcaaaccgaactctgagccccagcctggagtgtgacagcggcgaggaggacatactggga
cactcgtatccttcttcggtgataaagcagaggtccattttgcagtccagctcaggagag
gagagagactcgtttgacacttcgcctgactttaatcgctcacactctgacagcacacac
aaaagcaaccagagttcagaggatgtggaggttcgtctgcgctcctactcctactcctcc
cctaaagcaaaaccttcacggccactgctaaaccgagacacagctatcaccgacctggaa
gaaggccctttcagcagcagcggtcggtctctacttcaggctttatctctctctaaatcc
ctatctcgtctcaaccaagttaagcagagagcgtttaacctgactgaaacaccgagagaa
aagagggttctgggtttccgtaagcgggcccagtcagcagaggaggagagcaccgcgtca
caccaacacctcaccctcacagagttcctcaaagagattgaagatgaggagtgggacaga
tacataatcccgtctaaggttgagtcggagaagtacaaagtgagccggaccttcagcttc
ctgaagagcaggatgtccagtacccgcagcaaaaccaaggtgaaagggaaagaggtgaag
gagggaaagtctgcagcggcgaacgggcaccagtttgttcctgtctccccatctggttct
tctccctgtgtggcgtgtgagaagtctgtttttgggaaggagctgttgcagtgctccaac
tgcttcctgagcgtccataaaagctgtcgagaatctgttgcagcctgcggaaagaagccg
caggagaggaatgcagtgctgatgaaaagcaaaactatgtccctcccgcagaactttgtg
aaagaaaactcttcagccttttcgtcttcttccccctcttcctcctcttcagtctcgaca
gtgaccagagaagggaaaagagaaacagtcacctctttttctaaaagccaatctatctct
atagacagcagagggttgagtgaaacagcaggagcggacggtgagttcagcatgacggct
tgcacgaacagctcactgtgtgaagagggaacacctgtgacaacaactcccctgtccatc
gacctgcccgtcagcccaaaggattctgttgacgctcttctactgagtgacctgtcagct
gacctgctgggactcgaggccgagttgtggagcctcacagtcagtccagagttttgcaga
caacacgacaggcgcaccatcaaacgacaaaatgttatctatgagctgatgcagacagag
ctgcaccacattgaaactttgacggtcatgtcggaggtgttcaggagaggcatgttggag
gagctgcagctggactgggactgcgtggctcggatcttcccgtctttggaccctctgctg
ctcttccacaggaacttcttccgagcgatgcaggaacgccggcaggctgcgacccaaatg
gacaactctcaaaattacctcattcatcagataggagatatacttcttcagcagttttca
gatgaaaatgctgaaaagatgaagcaggtgtacggcaagttttgcagtcaccacattgag
gctgttaatgtcttcaaagagctccaacagcagaacaagaagtttcaaaactttgtcagg
caacagagcaataactctctggtcaaacgaagagaagtgccagaatgtatcctgctggtc
acacagcgcatcaccaagtatcctttactgctggagaggataatccagtacactcaagaa
ggaagccaggaacacgctgacttgtcaagtgctttggctcagatccgtgacatcattgca
gcagtggacctgactgttagtaaatatgagagatctcaggagctgcaggaagtgctcacc
aggcttgaaacaaagagctttgccaagctaaagaatggcaaggtgttccgcaagcaggag
ctgcacagcaaacacagagacctccatcacaaaggcctcgtcttctggaagactgctaca
ggacgtctgaaagacactttggctcttttgctaaccgatgttctggttttcctgcaagag
aaagaccagcgtttcgtatttgcatctgtggaccagaagcctccagtaattcccctgcag
aagctcattgttcgagaagtagccaatgaggaaagaggaatgttccttatctctgcatcc
tctgtggggccagagatgtatgaagttcacaccaccaccaaagaggaaaggaatgcatgg
atgagacacatccgacaggctgtggagagttgtccggaggaagaggaggaggaggagcga
actgcagagacagaggaagccaggcaagctgcggaactgagagttcagactattaacaag
ttccaggatacactgtttggccaggaccagcaaatctgccaaagcttggaggaaaagtta
caactttatgctgaactgactgagttgaccctccatccaccagaacctgtcccacatcgc
catctgctggtgcaaccagcacagtacatagacagtgagacgccgcgtcaggcttcttca
ctgctaacagctgcactcagagaagcggagaacctgatcagcattcttcaggctcgtgat
ggcctttctgtccaaagtcagaactctcctgtccaagcacctgagtgctgcagctacaac
agccacggcagcagcatccaggagtctccctctgaaccggactatctgagcacgctcagt
atgagctccacctctctcggatcagacagtgacttaaccgggttggacagtgtgtcgtgg
agctcagctgtcgagtttagaaaaggagacaccaaagggaccctgttaaaggtggcagaa
agtgtccagagtctgactcagcttctttatagtctgcaggcagctgtgaccctccaggac
agcttctatgaagtccacaaacttctcctccaagaaggagaaagacctcagctccgaagc
ctcgcctccctccaaagcagcctggaactggagaaacagaggagctctgacaagatgaaa
gaggaaaagagaagtttggagaggaggaaagaggacgtggatgaggtgcagaagctccaa
acaaagttgaaacaggagcagcagcactgggaaaaagagtgtgtagccagagagaaacag
cagggtgaccaggagaatttgctggagcagagagagcagcagtgtctcctggagactgag
cggctgcgctgcgagcgcgaggagctggaggcccagctgcaggagtatcagcagaatctg
gacagactgaaggagggccagaggagtgtggagagggagaaggagaagatcgaagcccaa
cagaggctgcttcagagctggagacacagccgccagagcagcctgccagtcacgataccc
ttggatggatacaagttgtctcaggtgtgcactcacagccgctcaggcagcctggatgcc
aactgttcagtgttcaagaacgaggcggctttgcttgcctccctgcagcagaaccacctc
caccagcccacgaactacaacaaccagcaacagcatgttctctccatgcagaagaaaaac
cacgacttccccctgaacagctccgcccacaccgccaaccccagcctcagcgccagcctc
tacaacagtctcaacactctgctgagccagactcacaacagacagcctccgtacggcaac
aaccacagctgttccagattcccaaccgactccctccacctgttcagcagcagggtcccc
tcacagacacaacggaccaacaacagagacctcagcctgctaggcaacacacaatcctcc
agttcctggaggtcagagttcacaggtcatggtcttaataaagaacacaactcctcctct
ccctctctcacccccctcctcccaccacaggcttacctctctcttgacggacaaaatgga
gaagaaggaggagaggagaatattgtttacctctga
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integrated database retrieval system
