Kryptolebias marmoratus (mangrove rivulus): 108233702
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Entry
108233702 CDS
T05608
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108233702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108233702
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108233702
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
108233702
RAVE complex
108233702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_HPS5
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_Vps41
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR19_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
108233702
NCBI-ProteinID:
XP_017267790
LinkDB
All DBs
Position
LG1:complement(23519244..23566819)
Genome browser
AA seq
3084 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGNINNVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVNCSPQGGQIAASYGSIVCVFEPVLLTDQKDTSLSKLNCQWQKTGQFALESMVRNLAW
HPTGSTLLTGSCSLQLWSNADDGKDEAGERGKQTETPKQNTHSTWRCIWQSKTASPVSFM
KFSPDGEFFATAGQDDCLVKVWYSTNKWKSCVARLFTPPDASVSLQGELAFSFVYLAHPR
SVTGFSWRKTSKHMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLISGYHDNHTSDHNSE
TVRCARKTQGMTPQEQFSFQESWHSSLSRDIPQPSVTSSLLHHQNQHHNHRRSNIGPPNA
NALCHFHIAASINPATDIPLLPSISSLNAVDDDEPGGLFTVHWLNNKELQFTLAMEVFLE
QLRGSLEQRNECTNEELEDEENSDEEDNRPVELQGFDGLPVLAVEHQVDVLLEEWNKAAD
MLFSIHPIDGSLLIWHVDWLDEFQPGMFRQAQVSFVSRIPVAFPTGDAISLSHSVVMYAC
NKNVDLAIQHDRQRPPGSSLSRTKSTLISYGSQGKVAPSSSLRLSIFTPNVLMISKHDDG
SLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTPEA
DSNLAPPEAHSCSTFLPHGSRLSRVSLGGVSQDPNAIYSELILWRVDPVGPLSLSGGVSE
LARINSLHASAFANVAWLPTLIPSSCLGVYCNSPSACFVASDGQSLRLYQAVIEARKLLS
ELSNPEISKYVGEVFNLVSQQSTAKPGCIIELDAITDFQGKETQLLHVFEEDLILGSVRK
EATLETPDSPSTSKPAFSGRFFLVVVELTPTGRSLLHMWHLHLAARPVTVEETTSQKHTD
PTSPVNGSQFIFDAINSPVTQKSKPLTSNLQSTCRLSLTTHRLCSQEMALPAGVEAISVT
PSAGHLSASCSLPAGRVPYLLATSCSDGKVRFWTCNVVSAELSSTDSLVYQWDEWPLLVE
ERLPSSSTVSVPGRPIEVSCCHTGRIAVAYREELNTPLYSTPHLSSHLLPTFPNLSSPPY
AFYNNNHLIPTLIVQPSPNLTPNPANVREPPVHISIFQCESTGGSQWILEQTIVLDATDS
TTNSAAGSGPTGSSSISNFHFSPPNEHCPGSASKSLVHLDWVSQEDGSHILTVSIGTKIY
MYGRLSGKPPELGLSSDSNRDQSLSRLVLLRLVNLVSSVEGSLPIPISLSWVRDGILVVG
MECEMHVYSQWQPPVPPKPNGTVVQDTDISSSVSSIASAVRQYQEEGHNSAAPTSSLTLP
KKSLTRSMMSLAQKLSGKKTAYDLPVEMEDSGLFEAAYQLFPTLPQYHPVQLLELMDLGK
VHRAKAILSHLVKCIAGEIVILKDNATNPEKRVRSRTISVGGSTARDQKIFSKAESSSPD
YTEISSIPPLPLYALLAADEDTPQLEKAGSMSGDSGHGSSQTDAYDELFHTPSTVDLDPL
DNGQEENGNKVIDLSQYSPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTIATT
STDLKDNQDKSKGGETLDECGLRFLLAVRLHTFLLTSLPPVHRAQLLRQGLSTCHYAWAF
HSEAEEELLNMLPALQKGEPTWTELRSMGVGWWLRSTNKLRRCIEKVAKASFQRNNDPLD
AAIFYLALKKKAVVWGLYRSQKNVKMTAFFHNNFNEDRWRKAALKNAFSLLGKQRFQHSA
AFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETASTYKKILQRYVLGHDKQIAA
QPDPFLRSISYWVLEDYSRALDTLIEQPANCKTSGSFETKYDRGSSATSACNPEVFNFYI
YLRTHPLLLRRHFSSSDKAKVALTAEGRRADSISLDERRLFFTAAYAHLHAGCPMLALEV
LSKMPKVRTHSKLSSQGDTGIAPELSVGSRNGQSEPDWSPPGLNGYHSDGNSNSRSDSVL
SFDWSQPSVTLPDEPLDLKWDSDKDDDDEEDQDETKTEIKAADNSVFQDRQDSVLTIAET
VKSDESEDGSEFIAPCDDIFLAQLKFTACLKIMTTELRTLSTGYELDGGKLRYQLCQWLE
REVVAHQRCCGYKPCLQEQSVQSDAPASGLVEEEQPRSPRGDGQRSRRLWLQSNQPLLRM
FLSYCSLHGSHGGGLASVRMELILLLQESHQDDSITSLVAASSQPTSIPLLMACTANVKT
VVANPIVYLTNLAHDILHTIVALDSPPHDDVVNNEIYVMHTLAASLSACIYQCLCDGHKY
SHVNHFTGTVYQSVLLSQKQPLKTVSMGEAVQPNTSPAQWPGIASLFRLLSSAGEETQPG
LAVLLCEILTAVFLSLFVHGMATHSSNELFRIVAHPLNSKLWMTVFGGGARIALMDKPSS
PARTPPSTSPAGSDRKSKRFRLLSSRSGSREESGIEREGPSSPKHGPVVEQEAASIFKEQ
FVPPELSIWDFFIAKPALPPSENRIDYDSEQSQDSQDEDDDEDESEDVFDLNSLQREHSN
HNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVASPLCHSVLKTLQCWEQVLQKRL
EIFGGPPAKYISTYLQDEATPGPALLRHKALLEPSNTPFRSNHYSALPVKRLWQYLVKQE
EVQETFIRNIFIKKPSTNQSVEDQTDSMKYSGMEETGNHQTESDLGCPGGKARIIHKESD
IITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDETETKSFSGDDFLVVHA
RDDFASLHGTTPYTHSSPGTPINVPWLGGQQTGRGASVMIKRNINNVRRMTSHPTLPYYL
TGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGSLSLWQTNTSG
NASKPYLTLHCHNKTAHDFIFVGSSSLISTAGLSTDNRNVCLWDTLVTPANSLVHAFFCH
ETGATVLSMAPRQQLLITGGRKGWITILELPQRNQRQSFQAHDSPVKALAVDPTEDCFIS
GSAEGNIKVWSLTTQCLLYTFLNEHARQSLFRNLGTGVMQVEVGPANHVFSCGADGTMKM
RLLPNRFAAVDSGDGSKRDVKFFI
NT seq
9255 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaagtccttacaggggctgtcaaccccggggacaactgtttctctgtt
ggtaacatcaacaatgtgcctttcacggcctatgcatcgggatgcgacgtggtgattttg
ggcagtaactttgaacggctgcagatcatcccaggggccaaacatggtaacatccaggtg
ggctgtgtgaactgctcaccacaaggtggacagattgcagcttcctatggaagcatagtg
tgtgttttcgagcctgttctgctgaccgatcaaaaagacacgtcattatctaaattgaac
tgtcagtggcagaagactggccagtttgctttggagtctatggtacgaaacctggcctgg
caccccacaggcagcactctgttaacaggctcctgcagcctccagttgtggtctaatgct
gatgatggaaaagatgaagctggagaaaggggaaagcagacagaaacacccaaacaaaac
actcattctacctggaggtgtatctggcagagcaagacggcatctccagttagttttatg
aagttttctccagatggggaattctttgccactgctggacaggatgactgcctggtgaag
gtctggtacagcaccaacaagtggaagtcatgcgttgcgagactgttcactcctccggat
gccagtgtgagtttgcagggagagctggccttttcctttgtttacttggcccatcctcgc
tctgtcactggtttctcctggaggaagacaagcaaacacatgccacgtggtgcagtctgt
aatgttctgctcacctgctgtaaggacagcgtttgtcgcctctgggcagagaccctgttg
ccaggtgacagcctcatctctggttaccatgacaaccacacatcggaccacaacagtgaa
acagtcagatgtgccaggaagacacaggggatgacaccacaagaacagttcagttttcaa
gaatcatggcattcctccttgagtcgagatatcccccagccctcggtgaccagctccctg
ctccaccatcagaaccagcaccacaaccacaggaggagcaacatcggaccgcccaacgcc
aacgctctctgccacttccacatcgctgccagcatcaaccctgcgacagacattccttta
ctgccctccatctcttccctgaacgctgtggatgacgatgaacctgggggcctgtttacc
gtccattggctcaacaacaaagagcttcagttcactttagccatggaggtctttttggag
cagctcaggggcagtttggagcaaagaaatgaatgcaccaatgaagagcttgaagatgaa
gaaaactctgatgaagaagataacaggccagttgagctccaagggtttgatgggcttcct
gtattagccgtggagcatcaggtggacgtcttgttagaggagtggaataaagcagcggat
atgctgttcagtatacatcccattgacggctctttgttaatctggcatgttgactggtta
gatgaattccaacccggcatgttcaggcaagctcaggtgtcatttgtgtcccgtatccct
gtagcatttcctacaggtgatgcgatctccctgagccacagtgtggttatgtatgcttgc
aacaagaatgtagatttagccatccaacacgacagacagcggccacctgggagctcattg
tctcgaactaaatctactctaataagctatggaagtcaaggaaaagttgcacccagcagc
agtcttcggctaagcatttttacccctaacgtccttatgatttccaaacatgacgatggc
tctctgaatcagtgggcagtcagttttgcagaggactccgctttctccactgtgctcagt
gtgtcccataaatcacgctactgtggtcaccgtttccatctcaatgacttggcctgtcac
tctttgcttcctctccttctcaccacctcacaccacaacgccttgagaaccccagaggca
gacagcaacctagctcctccagaggcccactcctgttccacgtttctgcctcatgggtca
cggctatctcgagtgtccctcggcggggtttctcaagatcccaatgccatctacagtgag
ctgattttatggcgagtagaccccgttggtccactgtctttgtcaggtggagtctcagaa
ctcgcgaggataaattcacttcatgcatcagcgtttgcaaatgtagcctggctgccgacg
ctcattcccagcagctgtttaggtgtgtactgtaactccccgagtgcatgctttgtggca
agtgatggccagtcgctcaggctctatcaggctgttattgaggctaggaaactcctgagc
gagctctccaaccctgagatatctaaatatgtcggggaggtgttcaaccttgtcagtcag
cagtccacagcgaaaccaggctgcatcatagagctggatgccattactgattttcagggg
aaggagacacagctcctgcacgtctttgaggaggatctgattcttggcagtgtgagaaaa
gaagccacgctggaaactcctgactctccctctaccagtaaaccagctttttcaggacgt
ttttttctcgtggtggtagaattgactccgacaggtcgctcactcctccatatgtggcat
ctccatcttgctgctcgccccgtcactgttgaggaaactacgtcacaaaagcacacggac
ccaacttctcctgtgaacggctctcagtttatctttgacgcgatcaattctccggtaacg
cagaagagtaagccattaacttccaacctgcagagcacctgtcgcctcagtctcacaaca
cacaggttgtgcagccaagagatggctcttccagcaggggtggaagccatcagtgttact
ccctcagcaggtcacttgagcgcatcgtgttctctaccagccggtcgtgttccttacctt
cttgccacttcctgttctgatggaaaggtgcgcttctggacgtgtaatgttgtttcagca
gaactctctagtactgacagcttggtgtatcagtgggatgagtggcctctcctggtggag
gaaagacttcccagcagcagcacagtaagtgtgcctggtcgccccatcgaggtgagctgc
tgtcacactggacggatcgctgtagcctacagagaggaactgaacactcctctatactca
acacctcatctgagctctcatctattgcctacttttcccaatctgtcatcccccccgtat
gcattctacaacaacaaccacctgatcccaaccctgattgtacaaccaagcccaaatctg
actcctaacccagccaacgtaagagaaccaccagtgcacatcagcatcttccagtgtgag
tccactggtggttcgcagtggatcctagagcagaccatagtcttggatgccacagattcc
acaaccaattctgccgctggcagcggcccaactggaagttccagcatttcaaattttcac
ttctctccaccgaacgaacactgtccaggttctgctagtaagagtctggttcacttggac
tgggtttcccaggaagatggctcacacatactgactgttagtattgggacaaagatttat
atgtacggccgactatctgggaagcctccagagctgggtctgtcatctgattcaaataga
gaccaaagtttgtctcgcctggttctgcttcgattagtcaatctggtctcctctgtggaa
ggctctctgcccattccgatttccctctcctgggttcgagatgggatactggttgtgggc
atggaatgcgagatgcatgtttactcccagtggcagcccccagttccccccaagcctaat
ggtacagttgtccaggatacagatatcagcagcagcgtctcctctatagcctcggccgtc
agacagtatcaggaggagggtcataactctgcagctcccacgtcttcactgactcttccc
aaaaagagcctaacaagatcaatgatgagcctggctcagaaactgagtggaaagaaaacg
gcgtacgaccttcctgttgagatggaagattctgggctctttgaagcagcttatcaactc
tttcctactctaccccaataccatcctgtacagttactggagctaatggaccttggaaag
gttcaccgggccaaagcaatcctctcccacttggtgaaatgcattgctggggaaattgtg
atacttaaagataatgccaccaatccagagaaacgtgtgaggagtcgaactatcagtgtc
ggaggcagcacagcaagggaccagaagatattcagcaaagcagagagctccagccccgac
tacacagagataagctccatccctcccctgcctttgtacgctctgctggcagcagacgag
gacacgccacaacttgaaaaagcaggcagcatgagtggagacagtggacacggctccagt
cagactgatgcttacgatgaactctttcatacacccagcacagtggatctggaccctctg
gacaacggacaggaagaaaatggaaataaggtgatagacttgtcccagtacagtcctaca
tactttggtcctgaacatgctcaggttctatcaagccacctccttcactccagtttgcct
ggattaactcggatggagcagatgtctctcatggctctggcagacaccatcgctaccacg
agcacagacctaaaagacaaccaggataagagcaaaggtggagagactctcgatgagtgt
ggactgaggttcttgctggctgtcagactccataccttcctcttgacctccttgcctcct
gtacaccgagcacagctgctacggcaaggtctgtcaacatgtcattatgcctgggccttc
cactctgaagccgaggaggagctgctgaacatgctgcctgctctgcagaaaggagagccc
acctggaccgagctgcgctccatgggcgtgggctggtggctgcgcagcaccaacaagctg
cgcaggtgtatcgagaaggttgccaaggcttcctttcagcgaaacaatgatcctctggat
gcagctatattttaccttgcactgaaaaagaaggcagtggtttggggactgtacaggtct
cagaagaacgtaaaaatgacggcgtttttccacaacaacttcaacgaggacaggtggaga
aaagcggcgctgaagaatgccttctctctgttgggaaagcagcggttccagcattctgca
gccttttttcttctcgccggctccctgaaggatgctgtggaggtgtgtttagagaaaatg
caggacttgcagctggccctggtgatctctagattgtacgagtcagagtttgagacggcg
tccacctataaaaagatcctccagagatacgttttaggacatgacaaacagattgcagct
cagccagacccgttcctgcggagcatctcttactgggtcctggaagactacagccgagca
ctggacactctgatcgagcagcctgctaactgcaaaacctctggctcctttgaaactaaa
tatgacagaggttcttcagccacatctgcgtgcaaccccgaggtcttcaacttttacatc
tacctccgtacacaccctctccttctccgacgtcactttagttcctcggacaaggcaaaa
gtggctttgactgctgaaggtcgcagggctgactccatcagtctggatgagagaaggctg
tttttcacagctgcatatgcacatctgcacgctgggtgccccatgctggcgcttgaggtc
ctttccaaaatgcccaaagtccgcacgcactccaaactctccagtcagggggatacaggc
atcgcccctgaactcagtgttgggagcaggaacgggcaatcagaacccgactggtctccg
cccggcctgaacggctaccactcagacgggaacagcaacagcagatcagattcagtgtta
agttttgactggagccagccgtcagtgacccttccagatgagcccctggatctgaagtgg
gacagtgacaaagatgacgatgacgaggaggatcaagacgagacaaaaacagaaatcaaa
gctgcagacaacagtgtgtttcaggacaggcaggactccgtgttgacgatagcagaaacg
gtgaaaagtgacgagagcgaagacggcagtgagttcattgcaccgtgtgacgacatcttc
ttggcccagctcaagttcacggcgtgcttgaagatcatgaccaccgagctgcggacgctg
tcgacagggtacgaactggacggagggaagctgcgttaccagctctgccagtggctcgaa
cgagaggtggtggctcaccagcgttgttgtggctataagccgtgcttgcaggaacagtcg
gtccagagtgatgcccctgcttctggactagtggaggaagaacagccccggagcccccgc
ggtgacggccagaggagcaggagactctggctgcagagcaaccagcctttattgaggatg
tttttgagctactgcagcttgcacggctcccatggtggaggactggcttctgtacgcatg
gagctcatattgctgctacaggagtcccaccaggatgactctatcacttcgttggtagca
gcaagctcgcagcccacctccatccctcttctcatggcttgcacagccaacgtgaagacg
gtggtggccaaccccatcgtctacctgaccaacctggctcatgacatcttgcacaccatc
gttgcactcgactcccccccacatgacgacgtcgttaacaacgagatttatgtgatgcac
acactggccgcctccctgtctgcctgtatatatcagtgtctttgtgatggacacaaatac
agccacgtgaaccacttcacaggaactgtgtatcagagtgttttgctgtctcagaagcag
ccgcttaaaactgtcagcatgggtgaggccgtgcagccgaacacctcgcctgctcagtgg
ccgggtattgcctctctctttcgtctgttgagctcagcaggcgaggagacgcagccgggc
ttggctgtgctgctctgcgagatcctgactgccgtcttcctcagcctgtttgttcacggc
atggccactcactccagcaacgagctgtttcgcatcgtggctcacccgctcaacagcaaa
ctctggatgacggtgttcggaggaggcgcccgcatcgctctcatggataaacccagcagt
ccagcaagaacacccccatcaacctcgccagctggatcagacaggaaatccaaacgattc
aggcttctttcatcacgcagcggatccagggaagagtctgggatagagcgggaggggcca
tccagtcctaaacacggccctgttgtggaacaggaagctgcctccatcttcaaagagcaa
tttgtccctccagagctgagcatttgggatttttttattgctaagcctgcgttgccgcca
tcagaaaacagaatcgattacgactctgagcagagccaggacagccaagacgaagacgac
gacgaggatgaatctgaggacgtgtttgacctcaactccctgcaaagagagcattcaaac
cacaattcatacagctggtgtttaatgcgtctggccatggttcagctggtgttggtcaac
ctcaagtctttttacccaatggcaggatacgatctgttagatttgcctgtggcatcgcct
ttgtgtcactctgtcctgaagacgctgcaatgctgggagcaggtactgcagaaaaggctg
gagatctttggcggcccccctgctaagtacatctcaacttaccttcaggatgaggccaca
cctggacccgccctgctcagacacaaagctctactggagccgtccaacaccccattcaga
agtaaccactattcagcactgccggtgaaacgtttatggcaatatttggtcaagcaggaa
gaagttcaggagactttcatcagaaacatcttcatcaagaaaccaagcacaaatcagtcg
gttgaggaccagactgacagtatgaaatattcagggatggaagagacaggaaaccatcag
actgagtcagatctgggctgccctggaggcaaagcgcgcatcatccacaaggaatctgac
atcatcacagcctttgcgatcaacaaggcaaaccgtaactgtttagtcatggcctccacc
cacgacatccaggagctggatgtgtcatccatcttggccacgcagatcctgacgtggatc
gatgatgatgagactgaaaccaaaagttttagtggcgatgacttcttggtggtccacgca
cgcgacgattttgcgtcgctccacggcaccacgccgtacacccacagcagcccgggcacg
cccatcaacgtgccctggctcggagggcagcagaccggcaggggggcttcagtgatgatc
aagagaaatatcaacaatgtgcgaagaatgacctcccatcccacacttccgtactacctg
acaggagctcaagatggcagcgtgaggatgtttgagtggggtcactcgcagcagatcatc
tgcttcagaagtccgggcaactccagagtcaccaggatccgattcaaccaccaaggaaac
aagtttgggattgtagatgctgatggaagtttgagcctctggcagaccaacacaagcggg
aatgcatccaaaccatatctgactttgcactgtcacaacaaaaccgctcatgatttcatc
ttcgtgggctcctcgtctctcatttccactgcaggcctctcaacagataacaggaacgtg
tgtctgtgggacactttagtcactcctgcaaacagccttgttcacgcgttcttttgccac
gagaccggcgccaccgtgctgtcgatggccccgaggcagcagctcctcatcaccggcggg
aggaaaggctggatcaccatcctggagcttccccagcggaaccagcggcagagctttcag
gcccacgactcgccggtcaaggcgctggcggtcgatccaacggaggactgcttcatcagc
ggctcggctgagggcaacattaaggtgtggagcctcaccactcagtgtctcctctacacc
ttcctgaacgagcacgcgcgccagtcgctgttcaggaacctcgggacaggcgtgatgcag
gtcgaggtggggccggccaaccacgtcttctcctgcggcgccgacggcaccatgaagatg
aggctccttcccaaccgcttcgccgccgtggacagcggcgacggcagcaagagggacgtc
aagtttttcatctag
DBGET
integrated database retrieval system
