Kryptolebias marmoratus (mangrove rivulus): 108233730
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Entry
108233730 CDS
T05608
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04142
Lysosome
kmr04144
Endocytosis
kmr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108233730 (cltcl1)
04142 Lysosome
108233730 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108233730 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108233730 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108233730 (cltcl1)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
108233730 (cltcl1)
Exosome [BR:
kmr04147
]
Exosomal proteins
Proteins found in most exosomes
108233730 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
108233730
NCBI-ProteinID:
XP_017267854
LinkDB
All DBs
Position
LG1:24613863..24643504
Genome browser
AA seq
1694 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDLSDPNN
PIRRPISADSAIMNPTSKVIALKDAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTV
ALVTDTAVYHWSMEGDSQPAKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKASTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLETGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEELFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPSQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKATDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRVHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGRYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWAKV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLNNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMKEHLELFWSRVNIPKVLRAAELSHLWAELVFLYDKYEEFDNAVITMM
NHPTDAWKEGLFKDIVAKVANVELYYKSLSFYLEYKPLLLNDLLTILSPRLDHSRAVSFF
SKMNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKRNNRWRQSVELCKKDKLYKDAMLFAAESKDAELSETLLQWFLE
KGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTV
DKLEEAESKRKTEDEVKEPQTMVFGQQLMLTAAATAPTPVAPVASVTPQSAYPAYGYPSP
AAGYPAQPAYGFNM
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatattaccgatccggttccaggagcatctccagctgcagaacctgggtgtg
aacccggccaacattggcttcagctacctgaccatggagtccgacaagttcatctgcatc
agagagaaggtgggcgagcagaaccaggtggtgatcgtggacctgtcggaccccaacaac
ccaataaggagaccgatctctgctgacagtgccatcatgaaccccacaagcaaagttatt
gcattaaaagacgctgccaagacactgcagatcttcaacatcgagatgaagagcaagatg
aaggctcacacgatgacagaggaggtcatgttctggaagtggatatccgtaaacactgtt
gcgctggtgactgatacggccgtctaccactggagcatggagggggattcccagccggcc
aaagtgtttgatcggcacgccagtctggcaggatgtcaaatcattaactacagaactgac
gaacagcagaagtggttactgctgatagggatttctgcgcagcaaaaccgcgttgttgga
gcgatgcagctgtattcagtcgacaggaaagtgtcccagcccatcgagggccacgctgct
gccttcggggagttcaaagtggagggaaacgccaaagcctccactctcttctgctttgct
gtgcgctcacaggctggaggaaagttgcacatcatcgaagtgggacagccagctgcagga
aaccagccatttgctaagaaagcagtggatgtgttctttcctccggaggcccagacggac
tttcctgtagctatgcagattggcaacaagcacggtgtgatatatttgatcacaaagtac
ggttacattcacctgtacgacctggagaccggagtgtgtatatacatgaaccgaatcagt
gcagagaccattttcgttactgcccctcacgaggccacctcagggatcattggagttaac
aagaagggacaggtcttatcagtgtgtgttgaagaggagaacattgtcaattatgccaca
aacgtcctgcagaaccctgatctagccttgaggatggctgtgaggtccaatctcgccgga
gctgaggagctttttgccaggaagttcaacaccctgtttgctcagggaagttattcagag
gctgcaaaggtcgctgcttctgcacccaagggtatcctgcgaacggcagaaaccatccgt
aagttccagagcgtcccatcccagccgggtcaggcctccccactcttgcagtacttcggg
attcttttggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcctgtc
ctgcagcagggccgcaagcagctgctggagaaatggctgaaggaggacaagctggagtgc
tcagaggagctgggggatctggtgaaggccactgacccaacactcgctcttagtgtttat
ctcagagctaacgtccccaacaaagtcatccagtgctttgcagaaaccggacagttccag
aagattgtgttgtatgctaaaaaggtgggctacactccagactgggtgtttctgttaagg
aatgtgatgcgggtcaatccagaccaggggctccagtttgcccagatgttagtccaggat
gaggaaccgctggccaacatcaaccagattgtggatgtttttatggagggcagcctgatt
cagcagtgcacctccttcctgttggatgctttaaagaacaaccgtccggctgagggacac
ttacagacacgcctgcttgagatgaacctgattcacgctcctcaggtggcagatgccatc
ctggggaaccagatgtttacacactatgaccgagcccacgttgctcagctgtgtgagaag
gcaggactgctgcagagagcgctggaacactacaccgacctgtatgatatcaaacgagcc
gtggtgcacacgcatctgctcaaccctgagtggctggtaaacttttttggctccttgtcg
gttgaggactctttggagtgtttaagggccatgctgtccgctaacatcaggcagaacctg
cagctgtgtgtccaggtagcatccaagtatcacgagcagctgggaactcaggcgttggta
gagctctttgagtctttcaaaagttatgaaggtttattttacttccttgggtcgattgtg
aatttcagccaggagcccgacgttcactttaaatacatccaggctgcttgtaagactggt
cagatcaaagaagtggagagaatctgcagagagagcaactgctacgacccagagagggtt
aaaaacttcctcaaggaggccaagctgacagaccagcttcctctcatcattgtctgcgat
cgttttgactttgtccatgacctggtgctctacctctaccgcaacaatctgcagaaatac
attgaaatctacgtacagaaggtgaaccccagtcggctgcctgtggtgatcggtggtttg
ttggatgtggattgttccgaggatgtcatcaagaacctgatcatggtggtcagagggcag
ttttccactgatgagctggtggaggaagtggagaaaaggaacaggttgaaacttctgttg
ccatggctggagtcgcgtgtccacgaaggatgcgaggagccagccacccacaacgccctg
gcgaagatctacatcgacagcaacaacacgccggagcgattcctgaaggagaacccattc
tacgacagcgccgtggtcggacgctactgtgagaagagggacccccacctggcctgtgtg
gcttatgagcgaggacagtgcgacctggatctcatcaaagtgtgcaacgagaactcgttg
tttaagagtgaagctcgatatctcgtacgaagaaaagatcctgagctttgggcaaaagtt
ttagaagaaaacaatcctttcagaagacaactcatcgaccaggtggtgcagaccgctctg
tcagagacccaggacccagaggaggtgtcggtcacagtcaaggccttcatgactgcagat
ctgcccaacgagctgattgagctgctggagaagatcgtactcaataactcagtcttcagt
gaacatcgaaacctccagaatctgctgattttgacggcaatcaaagccgaccgcactcgc
gtgatggagtacataaacaggctggataactacgatgctccggacatcgcaaacattgca
atcagcaacgagctcttcgaggaagcgtttgccatttttaagaagtttgacgtcaacacc
tcagccatacaggtgttgatagagcacatcgggaacttggatcgcgcctatgagttcgct
gagcgctgtaacgagccggcggtgtggagtcagctggccagagctcagctgcaaagagac
ttggtcaaggaggccattgactcctacattaaagctgtggatccatcggcatacatggag
gtggtcaacgcagccagcaaaaacgataactgggaggatttggtaaagtttctacagatg
gctcgtaagaaagccagagagtcgtacgtggagacggagctgattttcgctttagctaaa
accaaccgtctggctgagctggaagaatttgtcagtgggcccaacaatgctcacatacag
caggtgggcgatagatgttatgaggagggcatgtatgaagcagccaaactcttgtacaac
aacgtgtccaactttgctcgacttgcgtcaacattggtgcatctcggagagtaccaggca
gccgtggacagcgccaggaaagccaacagcacgcggacgtggaaggaggtttgctttgcc
tgtgtggacggcgaggagtttcggttggcgcagatctgcggtctgcacatcgtgatccac
gccgacgagctggaggacctgatcagctactatcaggaccgcgggtacttcgaggagctc
attgctctgctggaggccgcgctgggcctcgagcgcgcccacatgggtatgttcaccgag
ctcgccatcctctactccaagttcaaacctcagaagatgaaggagcacctggagctcttc
tggtccagagtcaacatcccaaaggtccttcgtgcagcggagttgtctcatttatgggca
gagctggtttttctttacgataagtacgaggagtttgacaacgcagtcatcactatgatg
aaccatccgacagatgcctggaaagaagggctgttcaaagatatagttgcaaaggttgcc
aatgtggagttatactataaatctctttctttctacctggaatacaaacctctccttctc
aatgacctgctgaccattttgtcccctcgtctggaccacagcagagctgtcagctttttc
tccaagatgaatcagctgaagctggtgaagccatacctgagatctgttcagaaccacaac
aataagtccgtcaatgaagctctcaacaacttgctgacagaagaggaagactaccaggga
ctgagagcctccatcgatgcttacgacaactttgacacaatcggcctggctcagaggcta
gaaaaacacgaactgattgaattcaggcgtatcgctgcttatctgtacaaaagaaacaac
cgctggagacagagcgtggagctctgcaagaaggacaagctctacaaggatgccatgcta
tttgctgcagagtccaaggatgccgagctgtcagagactctgctccagtggttcctggag
aagggcagaaaggagtgtttcgccgcctgcctgttcgcgtcctatgacctcctgcaccct
gatgtggtgctggagctggcctggaggcacaacatcatggactttgccatgccttacttc
atccaagtcatgagagagtacctgacaaaggttgatgagtttgcagcgaaggtgacggtg
gacaaactggaggaagcagaaagcaaaagaaaaactgaggatgaagttaaagagcctcaa
acgatggtgtttggccaacagctgatgctgaccgccgccgccaccgcccccacccccgtc
gctcccgtcgcttctgtgactcctcagtcagcgtacccggcttacggctacccctcccct
gctgccggttaccccgcacagcccgcatatggcttcaacatgtag
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integrated database retrieval system
