KEGG   Kryptolebias marmoratus (mangrove rivulus): 108233735
Entry
108233735         CDS       T05608                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmr03019]
    108233735 (atxn2)
Messenger RNA biogenesis [BR:kmr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108233735 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 108233735
NCBI-ProteinID: XP_017267867
LinkDB
Position
LG1:23394958..23414864
AA seq 1151 aa
MSMKAGGNRSKPGGGNTTGAAASGAGGSGGGRQNLGRGRHSGKGSAAVIFSGVYANMRMV
HVLTSVVGTKCELKVKNGAVYEGVFKTYGPECDLVLDAAHRKASELSIGPRKEDIVESII
FKASDVVVVTFKDVDLNFARKVSSDSDNFTDAAVTGRINGEHKEKDLEPWDGGETHNSDS
LESLDTDVSNGWDPNDMFKYNEEKYGVLSTYDSSLSTYTVPLERDDSEEFLKREARAAQL
AEEIEASATYKARVALENDERSEEEKYTAVVRSERETHTLSRENKYIPPGQRNREVMSWG
PGRQNSPRLGQSSGGPSAPRPGPHDYSPSSGADQRVVNGGSSHWPSPCPSPSSRPPSRYQ
SGPSSLPPRATTPTRPPSRPPSRPSRPPSHSSHPSYPSSSSSFSHHGPTSPASTLPKRMS
SEGPPRMSPKSQRTPRSHRVPPSRIGGVHPGVDLISHNSAGEAPAAPPTRSSSSGGTWSS
VVSGAHRPRSPRQNNLGGAPPGSSSLPSPQTGAAPVETVTTLTSAASPTAASPAPNMVAS
PSGDHAKECRVQETRQSSPSTNSESIKTLDSSPSITRPVCKGPPSMAQDHRKQIDNLKKF
SEDFRLQPSSNPDAGFDQMSKPPRDPADKPKDVPLDKASAVGRDGSENCVVLPAGASGAA
AAPSGTTANSSKPGSPAALSLSPSPSAPDQKRTGLDVTSQGVQTTSMSAFSGAKHEEKEE
KKEAVQDQVRKSTLNPNANEFKPRFNTQPKPANTPTPPRPQGQPSPSIVVQQPQAVYGQT
VCFPQMYPLTPVSPGVQKSIIWKSPAVYQVQMPHMTVSQSKPYRPGKVPNMPQQRSDQHH
PPGTPTMMHPATAAGPPIIAPSPAYSAQYFTCSPQQFTSQPLVQQMPHYQSQAQHVFSPV
MQGSARMMAPPAHGQPSLVSSSTTQYQEQTHTMYVSPGPMPQQYPHPSATLHHHPQHPQP
SATPTGQAQQGGPPQHGGPPSHPAASPVQHPQHPQAAAAALHLAGQPPQQQMYSALAPTP
PSMTPGPNPQSPQASFPSAQQTVYIHPQQVQHGYNPNHMAHVQQAHMQSGIVQSHHPGPA
HAPMMLMATQGPPGGPQPPMPQTALNPIPVSSTTHFSYLAHPQDLTTVRPRLSLSRFCVA
PAVQTHHQQQL
NT seq 3456 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggaggaaatcgaagcaagcccggcggtggcaacacgactggtgcg
gccgcctctggagccggaggaagcggcggggggagacagaatctgggcaggggaagacac
agtgggaagggttctgcagcggtaattttcagtggtgtatatgcaaacatgaggatggtc
cacgttttaacttcagtggtggggacgaagtgtgagctgaaagtgaaaaacggagccgta
tatgaaggagtatttaagacatatggtccagagtgcgacctggtgttggatgccgctcac
agaaaggcctccgagctgagtataggccccaggaaagaagatatcgtagagagcatcatc
tttaaagcctccgatgtcgtagtggtgaccttcaaagacgtggacctgaattttgccaga
aaagtctcctctgactcagacaacttcacagatgcagcagtgaccgggagaatcaacggg
gagcataaagagaaggacctggagccctgggatggaggagaaacccacaactcggacagc
ctcgagtctctggatacggatgtgtcaaatgggtgggaccccaacgacatgttcaagtac
aacgaggagaaatatggagttttgtctacgtatgacagcagcctgtccacatatacggtc
cccttggagcgcgacgactcggaagagtttctgaagagagaagctcgcgccgcccagctg
gcggaggagatcgaggccagcgccacgtacaaggcccgcgtggcactggagaacgacgag
cgctccgaggaggagaagtacaccgctgtggtgcgaagcgagcgggagacccacacactc
agcagagagaacaagtacattcctccaggccagaggaacagggaagtgatgtcatgggga
ccagggcgccagaattcacctcgtttgggtcagagctcaggcggaccctcagctcctcga
ccgggacctcacgactacagtcccagctccggggctgaccagagggtggttaatggaggt
tcatcccactggccctcaccctgtccgtctccttcttctcgtcccccctctcgttaccag
tccggcccctcctccctgcctcctcgggcgaccacgcccaccaggccaccctccagaccc
ccctcccgaccttccaggcctccctctcattcgtcccatccctcctatccctcctcttca
tcctccttttctcaccacgggcccacgtcgccagcctccaccctgcccaaacgcatgtca
tcagaaggtcctcccaggatgtccccaaagtcccagaggacgcctcgctctcacagagtg
ccgccatcgcggatcggcggcgtgcaccccggcgtggacctgatctctcacaactcggct
ggggaggctccagcagctcctccgaccaggagcagctcctctggagggacctggtcttca
gtggtcagcggagctcacaggcctcgctccccgcgacagaacaacctgggtggcgccccc
cccgggtcgtcctctctcccttcgccccaaacaggagcggctcctgtggaaactgttaca
acactgacatcagctgcttctcccactgctgctagccccgcccccaacatggtcgcctct
ccatcaggagatcatgcaaaagaatgtcgtgtccaagagacgagacaatcatccccctca
acaaacagtgagagcatcaagactttggacagctcacctagtatcacaagaccagtgtgt
aaaggacctccatctatggcacaagaccacagaaaacaaatagataatttgaagaaattt
agtgaagattttagattgcagcccagttcaaatccagacgctggcttcgatcagatgtcc
aagcctcccagagaccccgcagacaaaccaaaagacgtccccctggacaaagcctccgca
gtgggacgggacggttcagaaaactgcgtcgttcttcccgctggcgcctccggagcggcc
gccgctccttccggcaccaccgcaaacagcagcaagcctggcagccccgccgctctgtcc
ctgtccccgtctccttcagctccggaccagaagaggacggggctggacgtgacttcacag
ggagtccagacaacgagcatgtccgccttcagtggagccaagcacgaagaaaaggaggag
aaaaaggaagcggtgcaggatcaagtaagaaaatccaccctgaacccaaacgctaacgag
ttcaagcccaggtttaacacgcagcctaaaccagccaacaccccgacgccccctcggcct
cagggccagcccagcccctccatcgtggttcagcagccgcaggccgtgtacggccaaacc
gtctgcttccctcagatgtatccgctgacgcccgtcagccccggagtgcagaaaagcata
atatggaagtctccagctgtttaccaggttcagatgcctcacatgacggtcagccagtcc
aaaccctacagaccaggtaaagtgcccaacatgccgcagcagaggtccgaccagcaccac
ccgcccgggacgcccaccatgatgcacccggccacagcggcggggccgcccatcatagcg
ccgagcccggcgtactcggcgcagtacttcacctgcagcccgcagcagttcaccagtcag
ccgctcgttcagcagatgcctcactaccagtcccaggcacagcatgtcttcagtcctgtg
atgcagggcagcgccaggatgatggcgcctcccgctcacggccaacccagtctggtctcc
tcctccaccacacagtaccaggagcagacgcacaccatgtacgtgtctccagggcccatg
cctcagcagtacccccaccccagtgccaccttgcaccaccacccccagcaccctcagccc
tctgccacccccacaggccaagcccagcagggtggtcctccacagcacggaggtcctccg
agccaccctgctgccagtccggtccagcacccccagcacccgcaggcggcagcagcagcc
ctgcacctcgccggccagcccccacagcagcagatgtactcggccttggccccgacgccc
ccctccatgacgccggggcccaacccgcagtctccccaggcgtcgttcccttctgctcag
cagaccgtgtacatccacccgcagcaggtgcagcacggctacaaccccaaccacatggcg
cacgtgcagcaggctcatatgcagtccggcatcgtgcagtctcaccacccggggcccgcc
cacgcccccatgatgctgatggccactcagggccccccggggggtccacagccaccgatg
ccccagacggccctgaaccccatccccgtgtcctccaccacacatttctcctacctggcg
cacccacaagatctaacgacggtccgtccccgtctttctctgtcccggttctgtgtcgcc
cctgcagtgcagactcaccaccagcagcagctgtag

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