Kryptolebias marmoratus (mangrove rivulus): 108233832
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Entry
108233832 CDS
T05608
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108233832 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108233832 (trpv1)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108233832 (trpv1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
108233832
NCBI-ProteinID:
XP_017268020
UniProt:
A0A3Q3AYR6
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Position
LG13:19594047..19614316
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AA seq
781 aa
AA seq
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MDKAEMFGFTLEADDRTEEEKLRDKAAKNAPKAPMDTDYQEEMEKPKAQIRFNLNFHKEI
QGEQPQQSRDSSAFTIERLFEAVASGDARKLDGLYDYLHRNMKKLSDSLYQSYGKTALMK
ALLHLRDGKNETIDVLISVSERLVSEKPVSERLEEIKKFVNAEFTNSYYKGQTALHIAIE
RRSLCYVKLLVSKGADVHAKACGKFFQPHNGPYFYFGELPLSLAACTNQPDIVEYLMVNE
FQQAKAKMTDSQGNTVLHALVVVADKSKSKGNTEFIAAIYDQILRITNRLHPKLKLVDIE
NNEGLTPLKLAAKTGKIGLFSHLLKREFQERDTKHLSRKFTEWVYGPVHCSLYDLASVDT
YEDNSVLEILVYGRDIPNRHEMLETELLSRLLEDKWKRFAGRLFLFNFLVYILYLIIFTV
VAYNKKSKKVPFPIENNIIDYLYLSGQLLTTIANLYFFLIGLVEMIKKRPKLKTLLVDGY
YEILFFVQGFLFLVSAGLFLGGREEYLGFLVVCLALSWVNILYFSRGYKHMGIYSVMIQK
MILSDILHFLFVYIVFLFGFSAAMVSLLIEPPVVNVTTPKSRFYFATVSPGVDCVKPTYK
NISYTVLELFKFTIGMGDMEFAQDYQYGEVFYILLIGYIILTYILLLNMLIALMNRTVDK
ITEESTSIWKLQRAVTILDMEKRLPCCLKKVFRCGVEKNLNTLLGADRRRCFRVEEVNWN
KWNTNLTNISEDPGYCDGHLQSDSEASPKRKNRGRSLRVLFKDSSRRRETPDSTEMRPLY
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggcagagatgttcggcttcaccctggaggcagacgacaggacagaggaggag
aaattacgggacaaagctgcaaagaatgccccaaaggctcccatggacaccgattaccag
gaggaaatggagaaacccaaagctcaaatcagattcaatctcaacttccacaaagagatt
caaggtgaacagccacagcagagcagagacagctcggcttttaccattgaacgactgttt
gaagctgtggccagcggggacgcccgaaaactggacggcctgtacgactacctgcatcgg
aacatgaagaaactctctgactccttgtatcagtcctacggtaaaactgccctgatgaaa
gctctgctgcacctccgggacggcaagaacgagaccatagacgtgctcatcagcgtttca
gagagactggtttcagagaagccggtttcagagaggctggaagaaattaagaagtttgtg
aacgcagaatttaccaacagctactataaaggacagacagctctgcatatagccatcgag
aggaggagtctctgctacgtgaagctgctggtcagtaaaggagcagacgtccacgccaaa
gcttgtggcaaattcttccagccacacaacggcccttacttctactttggtgagctgccc
ctgtccctggcagcctgcacaaaccagccggacatcgtggagtacctgatggtgaacgag
ttccagcaagcaaaggctaagatgacggactctcagggcaacacggtgctgcacgccttg
gtggtggtggcggataaatcaaaatcaaagggaaacacagagttcatagctgccatttac
gaccaaatcctcaggatcaccaacagacttcaccccaagctaaagctggttgacatcgag
aacaacgaaggactgactcccctcaaactggctgcaaagactggcaaaattgggcttttt
tcacacctcctgaaaagggaattccaggagagagacaccaaacatctgtcccgtaaattc
accgagtgggtgtacggacccgtccactgctcgctgtacgacctggcctcagtggacacg
tacgaggacaattctgtcctggagatcctggtctacggcagggacattcccaaccggcac
gagatgctggagacggagctgctgagccgactgctggaggacaagtggaagaggttcgca
ggtcgactgtttctcttcaacttcctggtttacattctgtacctgatcatcttcactgtt
gtagcctacaataagaaaagcaagaaggtgccgtttcccatagagaacaacatcatagat
tacttgtatctttcaggccagctgctgacaactatagcaaacttatatttctttctcatt
gggcttgtcgagatgataaagaaacggccaaagctgaagacactgctggttgatggatat
tatgagattctcttttttgtgcagggcttcctgttcctggtctcagccgggctgtttctg
ggggggcgggaggagtacctcggcttcctggtggtgtgtctggctctcagctgggtgaac
atcctctacttctccaggggttacaaacacatgggcatctacagcgtcatgatccagaag
atgatcctcagtgacatcctgcactttctttttgtctacatcgtcttcctctttggattc
tcagcagcgatggtatcgctgctcatagagcctcccgtggtgaatgtaacgacaccaaag
tccagattttattttgccaccgtttcacctggtgtggactgtgtcaaacccacctacaaa
aacatctcttacaccgtcctggagctcttcaagttcaccataggcatgggcgacatggag
ttcgcccaggactaccagtacggagaggtcttctacattctgctcatcggctacatcatc
ctcacctacatcctgctgctcaacatgcttattgccctcatgaaccgcaccgttgacaag
atcaccgaggagagcaccagcatctggaagctgcagagggctgtcaccatcctggacatg
gagaagaggttgccctgctgtctgaagaaggtgtttcgctgtggggtggagaaaaatctc
aacactcttctgggagctgaccgccgacggtgtttcagagtcgaggaagtcaactggaac
aaatggaacaccaacctgaccaatatcagcgaggacccgggctactgcgacgggcacctg
cagtccgattcggaagcctctcccaagaggaaaaacagagggaggagcctgagagtcttg
ttcaaggacagcagtaggaggagggagacgcctgactccacagagatgaggcccctgtac
gtctaa
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