Kryptolebias marmoratus (mangrove rivulus): 108233901
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Entry
108233901 CDS
T05608
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108233901
Cell adhesion molecules [BR:
kmr04515
]
Immunoglobulin superfamily
ROBO family
108233901
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
108233901
NCBI-ProteinID:
XP_017268156
LinkDB
All DBs
Position
LG13:17116298..17219217
Genome browser
AA seq
1575 aa
AA seq
DB search
MLAVHVPLLISMLCVIQLELGEGMDISSDRGKHGGSREVFTHTPGSETGLDPDNNIGYKG
SRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPVPTVEWYKDGERVETDRDNPRSH
RMLLPSGSLFFLRIIHGRRSKPDDGSYVCIARNYLGQAISHNASLEVAILRDDFRQNPVD
VMVAVGEPAVLECQPPRGHPEPTISWRRDGSNLDDRDERITIRSGKLMITNTRKSDAGKY
ICVATNMVGERESEIAELTVLERPTFLKRPSSVVLLADESVEFHCVVQGDPVPTVRWRKD
DSDLPKGRFEILEDHTLIVRQVASSDEGSFTCVAENMVGKSEASATLTVHVNTVPPAFAI
HPRNQAVSVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPFSRLSVSQMGSLTI
MDVQRSDAGFYICQALNIAGSVITKALLEVTNAGTDHPPPVIRQGPINQTVPVDSTVVLG
CQTAGTPPPTVHWKKDSTPVSPVDSRISLTETGSLKIHYAKLGDSGFYTCIASSPSGEAA
WTAYLQVEEFGIVVQPSNPKDTNMIPGAPSKPEVSNVSRTSVTLSWKSSPDPSAPPVSYL
IEAFSYTLGNRWVTLAEHVKTETFVLANLKPGVVYLFMVRAMNAYGLSDPSPISDSVRTH
DSSSTMQGVDHRHIQRELGDVVIHLYTPTVLSSSAVRVKWMVEQQSPYIQGYKVLYRVSA
EHGQPEVQWSVLEVRALPEDGVVISQLKKGAIYEFKVRPFFDEFQGADSEVKVVRTLEEA
PRRAPQGVTVTKSDANGTAIIVSWKPPSEVDEDGVIQEYKIWCLGNESRYHVNQSVDGST
FSVLIPSLAPGIRYSVEVAASNGAGPGVKSDVAFFQLDSTGQMMDISDKRDTLAQISDVV
KQPAFIAGIGATCWLILMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGDS
VCGASRAVPLSMGEPLNQLWLPENWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPADC
IANYGNHPENKQGGQLASETAIYSDVNLSNKLSEIKAFNNSNFCYASPGGDPAATYEPIP
YATTQLIQASIKNKAVTGGTSAEPLDIPCWKQPPNLPPIPKELAAQMQHNTAELSKDLHG
NIAYSQSRDHSTGGSHHSSDRGSNSTSGSQNQKKGMQAQKMPKHNAVTWGEAMSAPHANA
LDCDDYSLPMEGSFDPEDIIRSCPTPPVRGAASSPTKVSCSHLAATSPQGYLNNGLHDGA
EHLNHTYSSIPLCLDADGREDNEEEMEEETDAEPAENLYSQSPHHQKHKYQLHHLSPHKQ
LLRELEQTPASSTGDLDRSVTGSMVNSWGSASEDNISSGRSSIVSTSEGSFFTDGDFSQA
VASSRDVVGLRMCKYPEESGRRQQRASSPMSTDSNMSPAITHKRPRRHKPNQPGQQSCQS
KDLFSDDTCMPLNFTSQISHCDYKVRGATLPRMGSGQARGRRGSAGTHKVKEGASEQREN
QEMHKIPQGGKGNSKSRQHSEFRDILLYSRPSFPSGHAQREQGSNSSGFQSCGSSRTKQG
EQVPPTGQVDEFLKS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagttcacgtaccgctcctcatcagcatgctttgtgtcatccagctggagctg
ggagaggggatggacatctcatcagacagaggaaagcacggagggagccgtgaggtcttc
acacacacacccggttcagaaacaggacttgatcctgacaacaacattggatacaaaggg
tctcgtctccgccaggaagacttccctccccgcattgtggagcacccatcagacctcatt
gtgtccaaaggggagccagccactctcaactgtaaggcagagggccgtccagtcccgacc
gtggaatggtacaaagatggtgaacgcgttgagacagaccgtgacaaccctcgctcccat
cgtatgctgctccccagcggatccctctttttcctgcgtatcatccatggacgaaggagc
aagccggacgatggcagctatgtttgtatagcccgaaactatctgggccaggcaatcagt
cacaatgcatccctggaagtagccattttacgtgatgacttcaggcagaaccccgttgac
gttatggttgctgttggtgagcctgcggtgctggagtgccagcccccccgtggacaccct
gaacccaccatctcctggaggagagacggttccaacttagatgacagagatgaacgcatt
acaatccggagcggcaagcttatgatcaccaacaccaggaagagtgatgctggaaaatat
atctgcgttgctacaaacatggtgggagaaagggagagcgagattgccgagctcacagtg
ctagagcggccaacctttctgaagcgtcctagcagtgtggtgttgttggcagatgagagt
gtggagtttcactgtgtggttcaaggagaccctgttcccactgtccgctggaggaaagac
gactctgacctacctaagggcagatttgaaatcctagaggaccacactttgattgttcgc
caagttgcctcttcagatgaaggctcctttacatgtgtagcggagaacatggttgggaag
tctgaagcatctgccacgctcactgtgcacgtcaatactgtgccccctgcgtttgccatt
caccccaggaaccaggcagtgtcagtgggcaggacagtcaccttccagtgtgaagccact
ggtaacccacagcctgctattttctggcagagggagggcagtgagagtcttctgttctct
taccagccacctcagcccttcagtcgcctatcagtctctcagatgggcagtttgaccatc
atggatgtccagcgctctgatgccggcttctacatctgccaggctctcaacattgccggc
agtgttattaccaaagcgctgctagaggttacaaatgctgggacagaccacccccctcct
gtcattagacaaggcccaatcaatcagactgttcctgtagacagcacagtggtactgggt
tgccaaactgccggcactccacctcccacagtccattggaagaaggatagtactcctgtg
tctcctgtggactctcggatttccctgacagaaactggatcactgaagatccactacgct
aagcttggagattcaggattctacacatgtatcgcctccagtccgagtggagaagctgcc
tggacagcatatttgcaagttgaagaatttgggattgttgtacagccaagtaatcccaaa
gatactaatatgattcccggtgctccatctaaaccggaagtctccaatgtcagccgcaca
tcagtcactctgtcatggaaatccagccctgatcccagtgcaccaccagtatcttaccta
attgaggcattcagttatacattaggcaacagatgggtgactttagcagagcacgtgaag
acagagacctttgtcctggcaaacctgaaacctggagttgtctacctcttcatggtcaga
gcaatgaatgcttatggcctcagcgatcccagtccgatttctgattctgtgagaacacat
gacagcagttccaccatgcagggggtggaccaccgtcacatccagagagagctgggagat
gttgtgatccacctgtatacaccaactgtgttgtcatcttctgctgttagagtgaagtgg
atggttgagcagcagtcaccttatatccaaggttataaggtgctttacagggtgtctgct
gagcacggccagcctgaggtacagtggagtgtcctggaggtacgtgctctgccggaggac
ggggtggtgatcagtcagctaaagaagggagcgatttacgagttcaaagtgcggcctttc
tttgatgagttccagggagctgatagtgaggtgaaggtggtcaggacattagaagaagcc
cctagaagagccccccagggtgtcactgtcacaaagagtgatgccaatgggacagctatc
attgtttcctggaaaccaccctcagaggtggacgaggatggagtcattcaggaatacaag
atctggtgtctgggtaacgagagccgctatcatgtgaaccagtcagtggatggttccacc
ttctctgtgctcattcccagtctggctcctggaattcgctacagcgttgaagtggcagcc
agcaatggtgccggacctggagtcaagagtgatgttgctttcttccaactagactccaca
ggccagatgatggacatcagtgacaaaagagacactttggcacagatctcagatgtggtg
aagcagccggcgtttattgctggcattggcgccacctgctggttgattctcatgattttt
agtgtgtggctctaccgtcaccgtaagaagaggagtggtctcagcagcacttacactggc
atccgcaaggtcccatctttcacctttacacccacagttgcatatcaaagaggagactct
gtgtgcggtgctagcagagctgtccctctcagcatgggcgaaccactgaaccagctgtgg
ctgccagaaaattggcccaatgcatgtgccaatcataaggactgtagcatcaactgctgc
aataatggcaatggcaccagtgatagtaacatgacaacatacagccgaccagctgactgc
atagccaactatggaaaccatccagaaaacaaacaaggaggacagcttgcttctgaaaca
gccatatacagtgatgtgaacctctccaacaagcttagtgagattaaagccttcaacaac
tccaacttttgctatgcaagtccaggaggagatccggcagccacatatgagcccattcca
tatgccacaacacagctcattcaggccagcatcaaaaacaaggcagtcaccggtggcacc
tcagcagagcctcttgatataccctgctggaaacagccgccaaatctgcctccaataccc
aaagagttggccgcacagatgcagcacaacacagctgagctaagcaaagatctgcatgga
aacattgcgtacagccagagccgtgaccatagcaccggaggctcacaccacagctcagac
agaggcagcaacagcacctcagggagtcaaaatcaaaagaaaggaatgcaggctcagaag
atgccaaaacataatgcagtaacctggggggaagccatgtctgctcctcatgctaatgcc
ttggactgtgatgactatagtctgcccatggaagggagctttgatccagaggacataata
agaagctgtcccacccctccagttcggggagcagcctcatctcctaccaaagtgtcctgc
agtcacctggctgccacatctccacaaggatacctgaacaatgggctacatgatggagcc
gaacacctcaaccacacttacagctcaatccccctctgcttggacgcagatggacgagag
gacaacgaggaagagatggaggaggaaacagacgcagagccggctgaaaacctctacagc
caatccccccaccaccagaagcacaagtaccagctgcaccacctctctccacacaagcag
ctccttcgagagctggagcagaccccggcctccagcaccggggacctggacagatcagtc
acagggtctatggttaacagctggggctcggcatcggaggacaacatctcatcgggcaga
tccagcattgtcagcacctcagagggttctttcttcacagatggggattttagtcaggca
gtagcctcttcacgggatgttgtggggctgcgcatgtgcaaatacccagaggagtcaggc
cggcgacagcagcgagcaagcagccccatgtcaacggacagcaacatgagtcctgctata
acacataaaaggcccaggaggcataaaccaaaccagcctggtcaacagagttgccaatcc
aaagatctgtttagtgatgacacgtgtatgcctctaaatttcaccagtcagatatcccac
tgtgactacaaagtgagaggggccactctgcctcggatgggctccgggcaggcccggggc
agacgaggtagcgctgggactcacaaggtcaaagaaggtgcatctgagcaaagagagaat
caagagatgcacaaaattccacaaggggggaaaggaaacagcaaaagccgacagcactca
gaattcagggacatacttctgtacagtcgtccctcttttccatcaggccatgctcagagg
gagcaaggctctaattcatctggctttcaatcgtgtggcagctccaggaccaaacaggga
gagcaggttccccctacaggacaggtggatgagttcctgaaaagctaa
DBGET
integrated database retrieval system
