Kryptolebias marmoratus (mangrove rivulus): 108234115
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Entry
108234115 CDS
T05608
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108234115 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108234115 (ercc6)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108234115 (ercc6)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108234115 (ercc6)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108234115 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
TFIIF_beta
DegQ
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
108234115
NCBI-ProteinID:
XP_017268545
UniProt:
A0A3Q3BBG7
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All DBs
Position
LG22:complement(21760000..21774545)
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AA seq
1442 aa
AA seq
DB search
MPVESAEPQASSSVSGPVSAALTPGGSEEDGATRGSAVCTFPENSQGSEAAAAYPANTGP
GECNNSGKRSGALVQINRQRIQVASASSGADELQGLGVAVYDQDVLEQGVLQQVDEAIQE
ASQAAAKVEVEKEYHSVLDDVRSVTASLKHINKIIEQLSPYAASSKDISRKIESVKRQKE
NKEKQLKKVRAKQKRLQAILGGEDVQRVEAELLAEDDEEEEPGPSTLGSMLMPAQETEWE
ELIRKGHMTPFGTRIQQKETKKEPRKLMLAEDSAFDQYLADQAKLATERKKLPLLKKKKS
SSLSPNEKIKGKGNKSVSSPKDKKLKKRMRKLQITALKAHPKARPKAEPQVHKPRRRRHT
EGEETDSEGSEYLPEDEGLDFEQEERDAMEEGFGDDDDEEYELKTYKRKMEGREKKKVKK
RDSEDEYCPGSSDEGEEGGRKAKKFKDDGDVEYYRQRIRRWKRQRLREQEEKRENGEELT
DDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVISFL
AGLSYSKLRTRGSNYRYAGLGPTIIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSN
KEKLIPEIASCHGILITSYSAVRNLQDALLRYKWHYIILDEGHKIRNPNAGVTTACKQFC
TPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQT
AFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQNFLDSKEVY
QILNGDMQVFSGLIALRKICNHPDLFSGGPRMLRGIPEDQLTEEEQFGFWKRSGKLIVVE
SLLRLWFRQGQRVLLFTQSRQMLDILEVFVREQNFSYLKMDGTTTIASRQPLIARYNEDK
SIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTQQVTIYRLLTA
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLADPTGTQGTETSAIFAGT
GSDVRVPKKPERPKSLHHISCTYKETLGNQNETGADNIHSSSRDIPLINDCNISPSSENT
QSKSVVSQSMTQNGLDVETNISVNVLPTGQNNNRDLEEAKPVSKTASLSIYHQHRDTRKH
REKRKHCDRADGHKRKHKKCKHSQDARFEGHRISHLVKKKTFNKEESEDNSTENQKKSDD
YVLARLFKKSGIHSVMQHDTIMESSNPDYVLVEAEANRVAKDALKALKISRQQCRLSFNQ
RPPPPAKKRFGQKKNSLLVAPSAQSTPTPTKCKDAAIVKKFTSKKPGAGVHFSGEGADSD
SNSAPLSSASLLAKMRARNHISKPSSQRAEEEEEEEGSEAPRTSQPPAPSTEHDELLVDL
RNFVAFQASVDGQASTQEVLEYFKPRLTQQQAPVFRELLRSICDFHRTCGQEGMWRLKEH
FR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagaaagtgcagagccccaggcctcctcctctgtctccgggccggttagtgct
gccctcacccccggagggtcagaggaggatggagctacgaggggctcagcagtctgcact
ttccctgaaaacagccagggctctgaggcagctgctgcctatcctgctaacactgggcct
ggagagtgtaacaactctggcaagaggtcgggagccttggtacagatcaaccgtcagcgc
atccaagtggcttctgccagttctggagccgatgaacttcaaggccttggagtggctgtg
tacgaccaggatgtcctcgagcaaggtgtcctgcaacaggtggacgaggccatccaggag
gcttctcaggctgctgctaaagtcgaggttgagaaggagtaccactctgtgttggatgat
gtcaggtctgttacagcatctctgaaacatatcaacaagattatagagcagctgtctcct
tatgcagcctccagcaaggacatcagtagaaagattgaatctgtcaaacgacagaaagaa
aacaaggagaaacaactgaaaaaagtcagagcgaaacagaagcgactgcaggccattctg
ggcggagaagatgttcaaagagtagaagctgaactgttggctgaagatgatgaagaggaa
gaaccaggaccgtccacactgggcagcatgctcatgccagcccaggagaccgaatgggaa
gagctgatccggaaaggccacatgactccttttggaactcgaatacaacagaaagagaca
aagaaggagcctcgaaaactgatgctcgctgaggactctgcctttgaccagtacttggcg
gaccaggccaagttagccactgaaaggaagaaattacctcttctaaagaaaaagaaaagt
tcttcactaagccccaatgagaagatcaaggggaaagggaacaaaagtgtctcctcaccc
aaggataaaaaactaaagaagcgcatgagaaagctgcaaataacagctctgaaggcccat
cctaaggcacgacccaaggctgagccacaggtccataaaccgagaaggaggcgacacact
gagggagaggaaaccgacagcgaggggtcagagtatctgcccgaagatgaagggctagat
tttgagcaggaggagagagatgccatggaagaaggttttggagatgacgatgatgaagaa
tacgagttaaaaacatacaagagaaaaatggagggaagagagaagaagaaagtaaagaaa
agagacagtgaagacgagtactgtcctggtagttcggatgaaggagaggaaggggggaga
aaagccaaaaaattcaaagacgatggagatgtagagtactacaggcagcgaataaggaga
tggaagcggcagcgacttcgagaacaagaggagaagagagaaaacggtgaggagcttaca
gatgacagcgatgctgaatttgacgaaggtttcaaagttcctggttttctctggaaaaaa
ctttacaaataccagcagactggtgtgcggtggatgtgggaactccactgtcagcaggca
ggcggcatcctgggagatgagatgggattgggcaaaaccattcaggtcatcagctttctg
gctggactaagctacagcaaactgagaactagagggtccaactacaggtacgctggcttg
ggtccaaccatcatcgtgtgcccagctacagtcatgcaccagtgggtgaaggagtttcac
acctggtggcctcctttcagggtggcagttctgcatgaaacaggctcattcaccagcaat
aaggaaaaactgattccggaaatagcatcatgtcatgggatcctgattacctcatattca
gctgtgagaaatttgcaagatgccttactacggtacaaatggcactatattatacttgat
gaaggccataagatcagaaatccaaatgctggggttaccaccgcctgcaaacagttttgc
actcctcacaggttcatcctgtcaggatcacctatgcagaacaatttgaaagagctttgg
tctctgttcgactttgtctttcctggcaaactggggacgttgcctgtcttcatggagcag
ttttctgtgccaataactatgggaggatacagcaatgcctcacctgtacaggtccagact
gcattcaagtgtgcatgtgtgctgagggacacaataaatccttacctcctccgaagaatg
aaggcagacgtcaaggccaacctctccttacctgacaaaaatgaacaggtactgttttgc
agattaacagaggaacagcggcaggtgtatcaaaatttcttagattccaaagaggtctac
caaatactaaatggagacatgcaggtattttcaggtttgatcgcactgcgtaagatctgt
aaccacccagaccttttctcaggagggccccggatgctgaggggaatcccagaagatcaa
ctaactgaggaggaacaatttggcttttggaaacgctcgggcaagctaatagtggtggag
tcgcttctccgtctctggttcaggcagggacagagggtcctgctcttcacacagtctaga
cagatgctggacatcttagaagtgtttgtaagggaacagaacttctcttacctgaaaatg
gatgggacgaccacaatagcttcccgacagccgctcatcgctcgctacaacgaggacaaa
tccatttttattttcttgctgaccactaaagttggtggtctgggagtcaacctgactgga
gccaacagagtcatcatttatgacccagactggaaccccagtactgatacacaggctcgg
gaacgggcttggaggattggccaaacacagcaggtaacaatctaccgcctgctgactgca
gggaccattgaagagaagatctaccacaggcaaatcttcaaacagtttcttaccaatcgt
gttctgaaggatccaaagcaaaggcgattcttcaagtctaatgacatctatgagcttttc
actttagctgatcccactggaactcagggaacagaaaccagtgccatatttgcagggacc
ggctctgatgtcagagtgcccaagaaacccgagaggccaaaatcattgcaccacatcagc
tgcacatataaagaaaccttaggaaaccagaatgaaactggtgcagacaacatacactcc
tcctcaagagacattcctctaataaatgattgcaacatctctccatccagtgaaaacact
cagagcaaatcagtggtcagccagagcatgactcaaaatgggctggatgtagagacaaac
atttctgtcaatgtgctgcccacaggacaaaataataacagagacttagaagaagccaag
ccagtgagcaaaactgcatccttgtccatctatcaccaacacagagacaccagaaaacac
agagaaaagagaaagcactgtgaccgtgctgatgggcacaaacgcaagcacaaaaaatgc
aagcactcccaggatgctcgatttgaaggtcatcgcatctctcatttggtgaaaaaaaag
acttttaataaggaagaaagtgaagacaactcaacagagaatcagaaaaaatcagatgat
tacgtcttggcaaggctgttcaagaaatctggcatccacagtgtgatgcaacatgacacc
attatggagtcttccaaccccgactatgttcttgtggaagcagaagccaacagggtggct
aaagatgccctcaaagctcttaagatttctcgacagcagtgtaggctttcctttaaccag
cgtcctcctccacctgcaaagaaacgttttggacaaaagaagaattctctcctagttgca
ccttctgctcagtccacccccactccaaccaaatgcaaggatgctgctattgtaaagaaa
tttacctcaaagaaaccaggcgcaggggtccattttagtggggaaggagcagacagtgac
tcaaactccgccccactgtcatcagcgtctctgctggctaagatgagagcccgtaatcac
atctctaagccctccagtcagagagcagaagaggaagaggaggaggagggctctgaagct
ccaagaacaagccaacctcctgctccatccactgaacacgatgagctgctagtagatctg
cgcaacttcgtagccttccaggcaagcgtagacggacaggccagcacacaggaagtgctt
gagtatttcaaaccaagactaacccagcaacaggcacctgtcttcagagaactactcagg
agcatctgtgattttcataggacctgcggtcaggagggcatgtggagactgaaggagcac
tttcgctga
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integrated database retrieval system
