Kryptolebias marmoratus (mangrove rivulus): 108234125
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Entry
108234125 CDS
T05608
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108234125 (hps1)
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
108234125 (hps1)
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GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
108234125
NCBI-ProteinID:
XP_017268557
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Position
LG22:21073026..21081528
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AA seq
676 aa
AA seq
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MKCLLIASESAEILFHWTDPEYQRNIQERYGTAQEEGEELPAFEDVLSTLFAPIIISSST
MEDSYTSFTTDDNHIYVLHQFDECLYIAVNGDGEEKEDDLRRKMHVMKKMVEVMFGMVTL
SGNLLRKELRPQDTEQRTRLWKYLQGLIETYSHLRDNDQSFLVEAVERLIHPTLCEQCIE
FLERRLVQQLNSSVERAGEEVLHAFILVHTKLLAFYSSRNASILTPSDLLAIIIMAQNLY
PSNVDLDDPSPEEVESTSGSGPESFYTPEPSPSSRDSSSSAEQPARGGTPMFEFVDPDIQ
MAEDSLHTLEVGPPDPSTPRRIFLEVSHKDGLYPMMPHSMYCLPLWPGITLVMLTKIPTS
AVAVSVYKYLEDFDKLEKHLREGPGSSAAARSPPNMHDVRSKMDKFIKALGPSELQFAQL
QSVWTEFKKRAFARGKSGFTRDLIPWCKKMKTQLCGIYRHCFLSDLADVPQRLSLSLQER
AQAMVQEKLIDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSGGQMIAPSLSITEHT
TSELGKGPVAHYIKNKVWGLVRTTRHCLQKGYSTVTLRDGDFYFCYFLWFENETGYRLDS
VDIPVLADDSPPIGMLAYDYYNRRLLRYYSKKHKGETVKCYELLTVHLGVIPTEIILQHC
RQLATKLWEPSRNPLL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttgctgatagccagcgagagcgctgagatccttttccactggactgacccg
gaatatcagcggaacatccaggagcggtatggaactgctcaggaagagggggaggagctt
cctgcctttgaggacgtcctgagcactctgtttgctccgatcattatctcctccagcacc
atggaggacagctacacctccttcaccacggatgacaaccacatctacgtacttcaccag
ttcgacgagtgtctctacatcgctgtgaatggagacggtgaagagaaggaggacgatctg
aggagaaaaatgcacgtgatgaagaagatggttgaggtgatgttcggtatggtcactctg
agcgggaacctcctgaggaaagagcttcgtcctcaggacacggagcaaagaacgcggctg
tggaagtatctgcagggtctgatcgagacctacagccacctccgggacaatgaccagagt
ttcttagttgaggcggtggagcggctgatccatcccacgctgtgtgagcagtgcatagag
ttcctggagcgtcgcctggtccagcagctcaacagcagcgtggagagagcaggagaggag
gttctgcacgccttcatcctggttcacaccaaactgcttgctttctactctagccgcaac
gcgagtatcctcaccccctcagacctcctggcgatcatcatcatggcccagaatctgtat
cccagcaacgtggacctggatgatccaagtcctgaggaggttgagagcacatctggttct
ggtcccgaaagtttttacaccccggagccctcgccttccagcagagactcgagcagttcc
gcggagcaacctgccagaggaggaactcccatgtttgagtttgtggacccagacatccag
atggccgaggacagcttgcacactctggaagttggtccacccgacccttcgacacctcgc
aggattttccttgaagtgtcccacaaagatggattgtatcccatgatgcctcactctatg
tactgtctcccgctgtggcccggcatcaccctggttatgctcactaagatccccaccagt
gcagtggccgtgtcagtatataagtacttggaggatttcgacaagctggagaagcattta
cgcgaaggcccagggagttctgctgcagccagaagccctccgaacatgcatgatgtccgc
agcaaaatggacaaattcatcaaagctttggggcctagtgagttacagtttgctcagtta
cagagtgtctggacagagtttaagaaacgagctttcgccagaggaaaatctggattcacc
cgagatctcatcccatggtgtaagaaaatgaagacccagctgtgtggcatctatcgacac
tgtttcctctctgacttagctgacgttcctcagcgtctgtccctcagcctgcaggaacga
gcccaggctatggtgcaagagaaactgattgactggaaggacttcctgttggtgaaaagc
aagcggaacatcacaatggtgtcatacctggaggatttcccaggcctcatccattttatt
tgcgtagaccgatcaggtggccaaatgattgctccgtcgctcagcatcacagagcacacc
acatccgagctgggaaaggggccggtggctcattatatcaaaaacaaggtgtggggcctg
gtcagaacaacgcggcactgtcttcagaagggctactccacggtcactctgcgcgatgga
gacttctacttctgttacttcctctggtttgaaaatgaaactggatacaggttggactca
gtggacatacccgtactagctgatgactcacctcccattgggatgcttgcctatgactac
tacaacaggaggcttcttcggtactacagtaagaaacataaaggtgagacggtaaagtgc
tacgagctcctgactgtccatttgggggtcatccccacggaaatcatcctccagcactgc
agacaactggcaaccaaactgtgggagccgtcacgcaacccgctgctgtaa
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