Kryptolebias marmoratus (mangrove rivulus): 108234150
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Entry
108234150 CDS
T05608
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108234150 (dcaf13)
04121 Ubiquitin system [BR:
kmr04121
]
108234150 (dcaf13)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
Other 90S particles
108234150 (dcaf13)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108234150 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR35_TULP_N
KNTC1_N
Beta-prop_SPT8
Beta-prop_WDR19_1st
MIOS_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
108234150
NCBI-ProteinID:
XP_017268596
UniProt:
A0A3Q2ZHD4
LinkDB
All DBs
Position
LG16:24148979..24161494
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPSLHPFEVSREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHSTSLSTLLSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGIIVRYC
GTSFFTVGDDKTIKQWKMEAPGYGEEEEPLNTILGKTVFTGLDHHQKKGVFATCGQQVDI
WDEQRSSPIRSFTWGVDSFSSVRFNPVETDLLGSCASDRSIVLYDMRESTPLKKVIMTMR
TNTLCWNPMEAYYFTCANEDYNLYTYDMRFLEKPIKVHMDHVSAVLDVDYSPTGQEFVSA
SFDKTIRIFSKDGGHSREVYHTKRMQHVICIKWSADNKYILSGSDEMNIRLWKANAAEKL
GVLSPRERQATNYNQKLKEKFQHHPQIRRIARHRHLPKSIFHQRNELRVMKEARQRKERN
VRKHSKPGSAPVVSEREKNVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaagttctctcgagaaatccggacgattatgtccgcgagactaaactcgac
attcagcgagtccccagaaactacgacccttccctccatcccttcgaggtgagcagagaa
tacacacgggctctgaatgccacaaagctggagcgggtgttcgccaagcccttcctggcc
tccctggacggtcatagagatggggtgaactgtctggccaagcacagcacgagtctgtcc
accctgctgtcgggctcctgcgacggagaggtgaaagtgtggaaccttaccaagcacgaa
tgcgtgcgcactctgcaggcgcatgaaggttttgtgaggggaataattgtcagatactgc
gggacttccttttttacggtaggggatgacaaaacaattaagcagtggaaaatggaagcg
ccgggctacggagaggaagaagagccacttaacactatcctgggcaaaactgttttcaca
ggactggaccatcaccagaagaagggtgtgtttgcaacatgtggccagcaggtggacatc
tgggacgagcagaggagcagcccgatccgctcctttacctggggtgtagacagcttcagt
tccgtccgcttcaaccctgtggagacagatcttcttggaagctgcgcctctgacaggagt
atagttttgtatgacatgagggaatcgacaccactcaaaaaggttatcatgacaatgagg
accaacacattatgctggaaccccatggaagcttattactttacgtgtgcaaatgaagac
tacaacctgtacacgtatgacatgaggttccttgaaaagcccataaaggtgcacatggac
cacgtctctgcagtactggatgtggattactcccccaccggacaggagttcgtgtccgcc
agttttgacaagaccattcgcatcttctccaaggatggaggacacagcagggaagtctac
cacaccaaacgcatgcagcatgtcatctgcataaagtggtcagcagacaacaagtacatc
ctgagcggctccgacgagatgaacatccgactgtggaaggccaacgcggcggagaaacta
ggagtgctgtcgcccagagagaggcaggccaccaactacaatcagaagctgaaggagaag
ttccagcatcacccgcagatcagacgcatcgctcgccaccgacatctacccaagagcatc
ttccaccagaggaacgagctgagggtcatgaaggaggctcgccagagaaaggagaggaac
gtccgtaaacacagcaagccgggatctgcccccgtggtgtctgagagggagaaaaacgtt
gtcgctgtggtgaaataa
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