Kryptolebias marmoratus (mangrove rivulus): 108234389
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Entry
108234389 CDS
T05608
Symbol
zgc:172302
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr02010
ABC transporters
kmr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108234389 (zgc:172302)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108234389 (zgc:172302)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108234389 (zgc:172302)
Transporters [BR:
kmr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108234389 (zgc:172302)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
108234389
NCBI-ProteinID:
XP_017269051
LinkDB
All DBs
Position
LG24:complement(6411545..6436833)
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AA seq
2371 aa
AA seq
DB search
MGFFRQLYLLLWKNVTYRRRNKIQLIIELLWPLFLFFILISVRQSNPAYKQGQCHFPNKA
LPSVGTLPWIQSIVCNINNPCFHSQTPGETPGQVGNFDNSILSRLFLDARTLLSYSGNQS
FSAFQDLTESVQLLEERLESLPTLRVKECLRPNETFSNFLLTNGSLPSSTVDLLMNSRLN
IQAVMTGVRMPLKVLVCNSSMLEQFLMVEGGANKTVLQTELCDLPADVLQEAERHFFSQL
DLTKFLTRNRLMVNTKELRDVTQAVTSVSQELAVIIDNFSALSSFEELNAALSVLSPENR
TAEPRESFRAFSKIMCGHPETGGQRIPSLNWYEDNSFKSFLGRNGTEDVALDSDNNTTPF
CRSLIHSLESNPLSRIVWRGIKPLFKGKLLYTPDIPVVRQVMKELNRTFEDLQILQDLHD
AWLEVGPQIKNYMETSVEIKLMQDMLRRPEIAVLVNMRLENTTWTASRIARFLSTPSPDN
PKTPGASPTWIDVYDNVGSTITILAHVTKCFNLNKLEGLETESQLISRALELLEDRQFWA
GVVFQLPNSSLSELPPHVTYKIRMDIDDVTRTNKLKDQFWDPGPSADPFNDMRYVWGGFV
YIQDLVERAVNYVLTGVKQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSIVPFLVSAALLIALLRWGDILPYSD
PAVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCGAWRNYLNTT
HRILISFLSPVAFGFGCEYFAKYEEQGIGMQWFNLRASPVEGDTYSFTVSIIMLYVDAFI
YAVAAWYIEAVFPGEYGMPRPWYFIFQINYWGGVPLEAGMPIPPAPTDQNEEHIESEPTN
LNLGVNIRNLVKIYKKGGKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPTS
GTVYIKGMDIRYDMDIIRRTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLSEEKVKAELGT
LLEDVGLLHKRHELTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLL
LKYRKDRTIILSTHYMDEAELLGDRIAIISKGKLCCCGSPLFLKSRLGSGYYLTVVKREE
LSTSTPSNSSICTSTSISTNKPPPFVKDSESSLSEDTGLGSEDSSSYLAALLSLVQQHIP
GARLVEESRREAVINLSLTAAKDGSLAILLSKLDQKLPELGISSYGLSDSALEEIFLRVA
EETGVDADPEQPAEPRHGAQPSEHKAEGQPAEDPETGRKRRCKKEHQETDLLSGDGHGGV
VLTGWWLIWQQFKALFIKRWLYARRSRRGIFAQIVLPALFVLIALLFSLIVPPFGKYPSL
ELQPWMYGEQYTFFSHDIPGNPTMENLLEALLDRPGFGTKCMEKEEEDNITRAQCESQRG
GQFMRPHVPFSTWKMFSRGNWSRNRPSPECQCSTDDVRRMLPECPEGAGGLPPPQIKRAT
GDILQNLTSYNISDYLVKTYSLILKKSLKSKKWVNEFRYGGFSLGGNTTHSASKVEDLQD
SIMAIRTRYRVEQNSSLDQLLEKLPEFLGEMHSENSVKVWYNNKGWHAMVSFLNVMNNGL
LRASLPPGPERTKHGITVFNHPLNLSKEQLTEIAMMTTSVDVVVSICVIFAMSFVPASFV
LFLIEERVSKAKHLQFVSGVKPFLYWLANFTWDMLNYSVPAMMVVLIFISFQQEAYVSES
NLPALILLLLLYGWSITPLMYPASFVFSIPSTAYVFLTSVNLFIGINGSIATFVLEMFVD
ETLNEINNVLKKVFLIFPHFCLGRGLIDMAKNQAMANAFQRLGTKANIDPLQWDFVGKNL
FAMAAEGFIFFIFTVLLQYKFFIYFRPWWRVPQLPPLGPEDEDVGRERERVKSGKAQSDI
LTMIDLSKVYRLGKKPAVDRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTPVTYGEAF
LNHHSVLREMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEEAVPKVAQWGVKK
LGLTQYANEKAGGYSGGNKRKLSTAISLIGSPPVIFLDEPTTGMDPKAKRFLWNCILSVT
KEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLTDNKSV
LDVCPVDAYMRTSFPSIELKERHQSVLQYQLASHSCSLARVFDALANNHEELGITDFSVS
QTTLDQVFISFAKEQTDDNCLTDVVITNGAAQLNFIPRINPPTIQPHAPVTPPQQRKSPQ
LPAKSPDSNPKAAKQKKTKVYKVDAEGDTSSSVPLSRLPQTEEKTQESSSSNSGLQRKSS
KRRGSKHKKESANKDPSALFIVGTTSQDSSL
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggggttttttagacaactctacctcctgctctggaaaaacgtcacatatcgcagacgg
aacaagatccagctgatcatcgagcttctatggccgctcttcctcttcttcatcctcatc
tctgttcgtcaatcaaaccctgcttacaaacaagggcaatgccacttcccgaacaaagcc
ttgccgtcagtaggcaccctgccctggattcagagcatcgtctgcaacatcaacaacccc
tgtttccacagccagacgccgggggaaacaccgggacaagttgggaactttgacaactcc
atattgtctcgccttttcttggatgctcggactcttctgtcctacagcggaaaccagagt
ttctctgcctttcaggacctgacggagagcgttcagctgctggaagaaagactcgagtca
ttgccaactctccgagttaaagaatgcctgagacccaacgaaactttctccaactttctc
ctgaccaatggcagcctgccgtcttcgaccgtggacctgctgatgaactcccgtctgaat
attcaggctgtaatgacaggagtccggatgccgctgaaagtcttggtgtgcaactcaagt
atgttggaacagtttctgatggtggagggaggagccaacaagactgttcttcagactgag
ctgtgtgacctaccagccgatgtcctgcaggaggctgagcgtcattttttctctcagctt
gacttaaccaagttcctcacgagaaatcgtctgatggtcaacactaaagagctcagggac
gtcactcaggctgttacatcggtttcccaggagctcgctgtaatcatagataatttctcc
gccctctccagttttgaagagctgaacgcagctcttagcgtgctgtctcctgaaaatcgc
acagcggagcccagagaaagcttcagagctttttccaagatcatgtgcggccaccctgag
accggcggccagcgcatcccgtccctcaactggtacgaagacaacagcttcaagtctttc
ctcggcagaaacggcacagaggacgtagcgttggacagtgacaacaacacaactcctttt
tgtagaagtttgatccacagcctggagtccaaccctctgtctcgcattgtgtggcgagga
atcaaaccgctgttcaaagggaaactgctgtacacaccagatattcctgtagtacgacaa
gtcatgaaggagttgaacaggacgtttgaagacctgcagattcttcaggacctgcatgac
gcttggttggaggtgggaccacaaatcaagaactacatggagaccagtgtggagatcaaa
ctgatgcaggatatgctgcggcgtccggagattgcggttctggttaatatgcgtctggaa
aacacaacgtggacggcctcgcggattgctcgtttcctgtcaacaccctcaccggacaat
ccaaagacacccggagcctcacctacgtggatagacgtctatgataacgttggaagcacc
atcaccattcttgcacacgtcaccaagtgcttcaatctgaacaaactggagggtctggag
acagagagtcagctgatcagtagagcgctggagctgctggaggacagacagttttgggcc
ggtgtggttttccagctgcccaactcatctttgtctgagttacccccccacgttacctac
aagatccgaatggacatcgatgatgtgacccggaccaacaagctcaaggaccagttttgg
gatcccggtccgtctgcagacccgttcaatgacatgcgctacgtttggggtggctttgtt
tatattcaggacctggtggagagagctgtgaactacgtgctcactggggttaaacagacc
acgggcatctacatccagcagatgccttacccctgttatgtggacgatgtttttcttcgc
gtgctgaaccgctccctgcctctcttcatgactctggcctggatttactcagttgccatg
atcatcaaaggtgtggtgtacgagaaggaggcgaggctgaaggaaaccatgaggattatg
ggtctcggtacaggaacgctgtggctcagctggttcatcagcagcatagtccctttcttg
gtttctgctgcccttctcattgctctgctccggtggggggatatattgccatacagcgac
ccagctgttgtcttcttcttcctcatggcgtttgccaccgccaccatcatgcagtgtttc
ctcatcagtaccttcttctcgaaggccaacctggccgccgcgtgcggaggactcatctac
ttcagcctctatctgccttatgtgctgtgtggcgcctggagaaactacctcaatacaaca
cacagaatcttaattagtttcctgtctcctgtggcatttggttttggctgtgagtatttc
gctaagtatgaggagcaaggcattggtatgcagtggttcaacctgcgggccagccctgtg
gagggagacacctacagcttcaccgtctccataatcatgctttatgtagatgccttcatc
tacgctgttgcagcctggtacatcgaagcagtttttccaggtgagtatgggatgcccagg
ccctggtattttatcttccaaatcaactactggggtggagttcctctagaggcaggcatg
cctatcccaccggcacccacagaccaaaatgaagagcacattgaatcagaacccacgaat
ttgaacctcggtgtgaacatcagaaatttggtgaaaatctacaagaaaggtgggaaactt
gctgtcaatcatcttaacctgaagttctacgaggggcagatcacctcttttctcggccac
aatggagccggcaaaaccaccaccatatccgtcctgaccggcctcttccctccaacctct
ggcaccgtgtacatcaagggcatggacatccgctatgatatggacatcatcagaaggaca
ctgggggtttgtccacagcacaatgtcctgtttgacatgctcacggtggaggagcatgtg
tggttttatgggtgcctgaagggcttgtctgaagaaaaggtgaaggctgaacttggcact
ttgcttgaggacgtgggcctgttacacaaacggcatgagctgaccaaaaacctctctggt
ggcatgcagagaaagctgtctgtggcgatagcgtttgttgggggctcaaaagtggttgtt
ttggacgaacccaccgccggtgttgacccttactcccgcagagggatctgggatctgctg
cttaagtaccgtaaagatcgaaccatcattctgtctactcactacatggacgaggcggag
ctgctaggtgaccggatcgccatcatctccaaggggaagctgtgctgctgcggatccccg
ctcttcctgaaatcccggctgggatctggttactacctgactgtagtgaagagggaggag
ctgagcaccagcactcccagtaactccagtatctgcaccagtaccagcatcagcaccaac
aagcctcctcctttcgttaaggacagtgagtcatctctgagtgaagacactggactggga
agtgaagacagtagctcttacctggcagccttgctctccctggtgcagcagcacatcccg
ggtgcgaggttggtggaggagtctagaagagaggcggtgatcaacctgtcactaacagcc
gccaaagatggcagcctggctatcctgctgtccaaactggaccagaagcttcctgagctg
ggcatcagcagctacgggctgtcagacagcgcactggaggagatctttctgcgagtggca
gaagaaaccggtgtcgacgccgatccagagcagccagcagaaccccgccacggcgcgcag
ccatcggagcataaagctgagggacaaccagccgaagatccagagacgggaaggaaaaga
cgctgcaaaaaagaacatcaggagacggacctgctgagtggagatggtcatggtggcgtg
gttctgacgggctggtggttgatatggcagcagttcaaggctcttttcatcaagcgctgg
ctttacgctcgaaggagccgcagagggatctttgctcagattgttctgccagctttgttt
gtgctgatcgcgctgctcttcagcctcatcgttcctccgtttgggaagtacccctccctc
gagctgcagccctggatgtatggagaacagtacaccttcttcagccatgacatcccgggg
aacccgaccatggagaacctgctggaagctttgctggaccggcccggttttggtaccaag
tgcatggaaaaagaggaggaggacaacattacaagagctcagtgtgaaagtcagaggggg
ggccagttcatgaggccacatgtacctttctccacctggaagatgttcagcagagggaac
tggagcagaaacagaccctcgccagaatgtcagtgcagcacagacgacgttcgccggatg
cttcctgagtgtccagagggcgccggcggacttcctcctccacagattaagagggcgaca
ggagacatccttcaaaatctgacaagttataacatctctgattacctggtgaagacctac
tctctaatcctaaagaaaagtctgaaaagcaagaagtgggtgaatgaattcaggtacgga
ggcttctccctcggaggcaacaccacccacagcgcatctaaggtcgaggatctccaagac
tccatcatggcgatcaggactcgttaccgagtcgaacagaacagttcgctggatcagctg
ctggaaaagctgcccgagtttctgggagaaatgcacagtgaaaacagtgtcaaggtgtgg
tacaacaacaaaggctggcacgccatggtgtcttttctcaatgtgatgaataacggcctg
ctgagagccagcctgccgccgggaccagagaggacgaaacacggcatcactgtctttaat
caccctctcaacctcagcaaggaacaactcaccgaaatagctatgatgaccacatcagtg
gatgttgtggtgtccatctgtgtgatctttgccatgtccttcgtgccggccagctttgtc
ctgtttctcatcgaggagcgagtcagtaaagccaaacatcttcagttcgtcagcggggtc
aaacccttcctctactggctggccaactttacctgggacatgttgaactactccgtcccg
gccatgatggtggtgttgatcttcatcagttttcagcaggaggcgtatgtctctgaatcc
aacctgcctgctctcatcctcctccttctactttacgggtggtccataactcctctgatg
tacccagcgtcctttgttttttccatcccaagcacagcttatgtgtttctcacctccgtc
aacctcttcatcgggatcaacggaagcatcgccaccttcgtcctggagatgtttgtagat
gagactctgaacgagatcaacaatgtcttaaagaaggtgtttttgattttcccacatttc
tgcttgggacgaggactcatcgacatggcgaaaaaccaggcgatggcaaacgccttccag
agactgggaaccaaagcaaatattgaccctcttcagtgggactttgtggggaagaatctg
tttgcaatggctgctgaaggtttcatcttcttcatcttcaccgtactcctgcagtacaag
ttcttcatttatttcaggccatggtggagagttcctcagctgcctcctctcggtccagag
gatgaagatgtaggcagggaacgagagagggtgaaaagcggcaaagctcagtcggacatc
ctcaccatgatagacctgagcaaggtttataggttaggcaaaaagccagcagtcgatcgt
ctgtgccttgggattccccgcagtgagtgttttggtctacttggtgtgaacggagcaggg
aagacgtccacatttcgcatgctgactggagacacgcccgtcacgtatggggaggctttc
ctcaaccatcacagcgtgctgagagagatggagcgagtccaccagctgatgggttactgt
ccacagttcgacgccatcagtgacctgctgacgggccgggagcacctggagctgtacgcc
cgcctgcggggggtgccagaggaggctgttcccaaggtggcgcagtggggcgtgaagaag
ctggggctgactcagtatgcaaatgaaaaggctggaggctacagtggcggcaacaagagg
aaactctccacagccatctccctcatcgggtctccacctgttatattcctggatgagccc
accaccgggatggacccaaaagccaaaagatttctgtggaactgcatcctcagcgtcaca
aaagagggccgagcagttgtactcacctcccacagtatggaggagtgtgaggccctctgc
accaggatggccatcatggtcaacggcaggtttcagtgtcttggatctgtgcaacacctg
aagaacaggtttggcgatggatacacaatcatcctccgtttaacggacaataaatctgtc
ctggacgtctgtcccgtcgacgcctacatgagaacgtcttttcccagcatcgagctgaag
gagcggcatcagagcgtcctgcagtaccagctggcctcacactcctgctccttggctcgc
gtctttgatgcgctggccaacaaccacgaggagctcggcatcacagacttctctgtctca
cagaccactctggaccaggtatttatcagctttgcgaaggagcagaccgatgacaactgc
ctcacagatgtggtcatcaccaacggtgcagcccaactaaacttcatcccccgaatcaac
ccgcccaccatccagccacacgcaccggtcacacctcctcagcagaggaagtctccacag
cttcctgctaaatctcccgacagcaatccaaaagcagctaaacagaaaaagaccaaggtc
tacaaggtcgatgctgagggagacacgagcagcagtgtgcctttgagccggttacctcag
accgaggagaagacccaggagtcgagcagcagcaacagtggacttcagaggaaatccagt
aaacgccgtggctccaaacacaaaaaggagagcgccaacaaagatccctctgcgctcttt
atagtcggcaccacctctcaggacagctcgctgtga
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integrated database retrieval system
