Kryptolebias marmoratus (mangrove rivulus): 108234410
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Entry
108234410 CDS
T05608
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03030
DNA replication
kmr03410
Base excision repair
kmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108234410 (pole)
03410 Base excision repair
108234410 (pole)
03420 Nucleotide excision repair
108234410 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108234410 (pole)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108234410 (pole)
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108234410 (pole)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
108234410 (pole)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
108234410 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
108234410
NCBI-ProteinID:
XP_017269080
LinkDB
All DBs
Position
LG1:complement(18035258..18049834)
Genome browser
AA seq
2286 aa
AA seq
DB search
MVLQNSGRFRADRGRSGADQENQDDGSSAVKRLERSQFTDDMDARFGFDRMKEPGEKTGW
LINMHPTEILDEDRRMISAVNYYFIQEDGSRFKVALPFKPYFYVATKKNCEREVVSYLSK
KFQGKVAKLETLPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKAKREIAPAVRKNREREQ
SNDAYTSMLSSALAGASVTPADEDGMSKSIADQLDNIVDMREYDVPYHVRLSIDLKIHVA
HWYSVRYRGGAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMID
GQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEDNEASLIQRWFDHVQETKPNIFVT
YNGDFFDWPFVETRAALHGLSMHKEIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEKLPLEQVTNFNEVCD
EIKTKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
SCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPARAFHALNREEQAKHEKK
RLADYCKKAYKKMHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSA
AQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKTSNEKKPKVTISYPGAMLNILV
KEGFTNEQYHELEDPASLTYNIRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFDLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIFKQKKISELFTSEGKRQVTHQPLE
AGEAADIEDFGMPARPLQPAVLISTKRKRASQGDDSQVESQDVELTQSWREILGPPPPKG
TTQEGRLVWLRYHKKKWELQLRQRKERKKRRKLLDGEAQPVGGGVIRGGPTTGLGSFLRR
TARSVLDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAVY
KKVNRMLPRSNMVYYLYEYSVPEDMYQKHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCVCMVNKHVVRDLAGRETDTFDLEHLERRSLAQFSYLEPGSVRHMYLYHHSQGQKALFG
LFIPSQRKASIFILDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHTFEVRAENDI
KAISRALQRILLNYKVERRGPTLIALQSNWDLLRLAAGMPVLEEFPVVPVHVVDEISYSV
LDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVMENDDRGSVEINAQGCYSTVCVELDLQSLAVNTILQ
SQHVNDMEGGASLGVSFDVIQQGSLEDMMSGNQGASALASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVVHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLGS
TVVYGNFNRIILSTKKRRIDDAIAYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDPAN
FGGVQGKLPSSVLYGEEGTKQKKSRQEGEDEDESEDEDVVEEDDADGETEEVEELIESSW
NIMHYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQASQQAVGD
LSALPGMISFSQEYVASELTQNIFTITQKIQKKVTGSRNVTQTSELFPVLPGSHLPLNKP
ALEFVKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPEVICHH
CNFCRDLDLCKDPSMAQDGSVLPQWFCSSCQVQYEKDSIEMALVEALQKKLMSYTLQDLV
CIKCKGVKEGNMPLYCRCAGDFDLTYSAKSFSEQITVFQNIASHYNMRFLEETIDWLLVM
SPQISR
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcagaacagcggacggttccgggcggaccggggtcgaagcggagcggaccag
gagaaccaggatgacggctcctcggctgtcaagcggctggagcgcagccagttcaccgac
gacatggacgcccgcttcggcttcgacaggatgaaggagcccggcgagaagacgggctgg
ctgatcaacatgcaccccacagagatcctggatgaagacaggaggatgatcagtgctgtg
aattattatttcatccaggaggatggaagcagattcaaggtggctcttcccttcaagcct
tatttctacgtggctactaagaagaactgcgagagagaggtcgtctcgtatttatccaag
aagtttcaagggaaagtggcgaaactcgaaacccttccaaaagaagatctggatctgccg
aaccacctggttggtctgaagaggaactacatcaagctgtcgttcaacaccgtggatgac
ctcgtcaaggccaagcgagagatcgccccggccgtgcgcaagaaccgagagcgggagcag
tccaacgacgcctacacgtccatgttgtccagtgctctggcaggagccagcgtgacgccg
gctgacgaagacgggatgtccaagagtatcgccgaccagctggacaacatcgtggacatg
agggagtatgacgtgccgtaccacgtccgactgtccatcgacctcaagatccacgtggct
cactggtacagcgttcgataccgcggcggcgcctacccgccggagatcgtgcgcagggat
gaccttgtggagcgaccggaccccgttgttttggcttttgacatcgagacgaccaaactt
cctctgaagttccccgacgcagagacggatcagattatgatgatctcctacatgatcgat
ggccagggctttctgatcaccaaccgcgagatcgtctctgaggacatcgaggactttgag
ttcacccccaaacctgaatacgaggggccttttacggtttttaacgaggacaatgaggct
tccctcattcagaggtggttcgatcacgtccaagaaaccaagccaaacatctttgtaacc
tacaacggagacttctttgactggccttttgtggaaacccgggcagccctccacggactg
agcatgcacaaggaaatcggtttccagaaggacagccagggggagtacaagtccagccag
gccatccatatggactgcctgaggtgggtgaagagagacagctacctccctgtggggagt
cacaacctgaaggcggcagcgaaggctaaactgggctacgaccccgtggagctggaccct
gaggagatgtgccgcatggcaactgaagaaccgcagaccttagcgacctactcggtgtca
gacgccgtggccacgtattacctgtacatgaagtatgttcaccccttcatcttcgcgctg
tgcaccatcatccccatggagccggacgaggtgctgcggaaaggctcggggaccctgtgc
gaagccctgctcatggtgcaggccttccacgccaacatcgtgttccccaacaagcaggag
caggttttcaacaagctgacggacgacggccacgtcatggactccgagacgtacgtgggc
ggccacgtggaggcgctggagtccggcgtgttccgcagtgacatcccctgccgctttaaa
atgaacccagctgcgttcgactttctgctccagagagtggagaggacgatgcgacacgcc
gtggaggaggaggagaagctccccctggagcaagtcaccaactttaatgaggtgtgtgat
gaaatcaaaacgaagctgacgtccttgaaggaggttccaaacaggatcgaatgtcctctc
atctaccatctggacgtcggggcgatgtaccccaatattatcctcaccaaccgcctgcag
ccgtcggctatggttgacgaggccacgtgtgcagcgtgcgacttcaacaagcccggcgcc
tcctgtcagaggaggatggcttggcagtggagaggagaaatcatgcctgcgagtcgcagt
gagttccaccgcatccagcagcagctggagtccgagaagttcccgccgctgttccccaac
gggccggcccgggccttccacgccctgaacagggaggagcaggccaaacacgagaagaaa
cggctggcagattattgcaaaaaggcctacaagaagatgcacgtcaccaggctggaggag
cgagttaccaccatctgtcagagagaaaactccttctacgtcgacacggtccgggcgttc
agggatcggcgttatgagttcaaaggacttcacaaagtgtggaagaagaagctgtcagca
gcgcaggacagcggagatgctgctgaggtgaagcgctgtaagaacatggagatcctgtac
gagtccctccagctggctcataagtgcatccttaactccttctacggctacgtcatgagg
aaaggtgctcgctggtactccatggagatggccggcatcgtgtgctacaccggagccaac
atcatcactcaggccagggagctcattgagcaaatagggaggccccttgagttggacact
gacggaatctggtgtgtccttcccaacactttccctgagaactttgtgataaagaccagc
aatgagaagaagcccaaagtgaccatctcctacccgggggccatgctgaacatcttggta
aaggagggcttcaccaacgagcagtaccacgagctggaggaccccgcgtcgctcacctac
aacatccgctcggagaacagcatcttcttcgaggtggacgggccgtacctggcgatgatc
ctgcccgcctccaaggaggaagggaagaagctcaagaagagatatgctgtgttcaatgaa
gacggctctctggctgagctcaaaggctttgaagtgaagaggagaggtgagctccagctc
atcaagatttttcagtcctccgtgttcgaggctttcctcaaaggtaccactctggaggag
gtctacgcgtctgtggccaaagtggccgactactggctggatgtgctgtacagcaaggct
gccaacatgcccgacgcggagctgtttgacctgatttcagagaatcgttccatgtccaga
aagcttgaggactacggagagcaaaagtccacgtccatcagcacagccaagaggctggca
gagtttctgggggaccagatggtgaaagacgcgggtctgagctgccgctatgtcatctcc
cggaaaccagagggttcccccgtcacagaaagagccattcctctggccatcttccaggca
gagcccagcgtcaagaagcattttctccgaaagtggctaaagatgcccagcctgcacgac
ctggacatacgatctatccttgattggagctattacattgagaggttgggtagtgcaatc
caaaaaatcatcactatccctgcagctctgcaacaggtgaagaatccagttccaagagtg
aggcatcccgactggctgcacaagaaactcctggagaaaaatgacatctttaagcaaaag
aaaataagtgagctgttcaccagtgagggcaagagacaggtgacccatcagcctcttgaa
gcaggagaagctgcagacatcgaggactttgggatgccagccagacccctgcagccagcc
gtcctcatcagcaccaagaggaagcgggcttctcagggagacgacagccaggtggagtct
caggacgtcgagctcacgcagtcgtggagagaaatcctgggaccccccccaccgaaggga
accacacaggaggggcgtctcgtttggctgcgctatcacaagaaaaagtgggagctgcag
ctgaggcaacggaaggagaggaagaagaggaggaagctgctggatggggaagcccaacct
gtgggcgggggggtgatcagaggtggccccaccaccggcctgggaagcttcctccgcagg
acggcccgcagcgtcctggacatgccgtggcagattgtgcagattgcagagacgagccac
cccggcctgtacaagctgtgggctgtgatcggaaacgacctccactgcatgaaactcaac
atcccgcgagttttctacgtcaaccagaaagtcccaaagcaggaggagggagccgtgtac
aaaaaggtgaaccggatgctgcctcgctccaacatggtgtactacctgtacgagtactct
gtaccagaggacatgtaccaaaagcacatcaatgagatcaacgctgacctctccgctcca
gacatcgaaggcgtctatgaaacacaggtccccttgttgttccgtgcgctggtgcagctt
ggatgtgtgtgcatggtgaacaaacacgtcgtgagggatctggccggcagggagaccgac
acctttgacctggaacatctggagaggaggtctctggcccagttcagctacctggaacct
ggaagtgttcgccacatgtacttgtatcaccacagccaagggcagaaggctctgtttggc
ctgttcatcccctctcagcgcaaagctagcatcttcatcctggacaccgttcgaagcaac
cagatgcccaacctgagtaatctgtacacggctgagcgcaccgccctgctggagaagaca
acagaggagcttctgcctccagagaaacacaccttcgaggttcgagctgagaatgacatc
aaggcgatttcccgcgcgctccagcgcatcctgctgaactacaaggtggagcggcgtggg
cccaccctcatcgccctgcagtccaactgggacttgctgcgactggcagcagggatgccg
gtgctcgaggagttcccagtcgttcccgtacacgtggtagacgagatcagctatagcgtt
ctggactggcaacgccacggggcccggcgaatgatccgccattacctgaacctggacagc
tgcctgtctcaagcgtttgacatggcccggtattaccacctacccgtgggcaatttaccc
caggatgtgtccatttttggctcagacttgttcctcgcgagacacctacgcaaacacaac
cacctgctgtggctttcgccgacagccaggcccgacctcggaggaaaagaggccgacgac
agccgtctggtcatggaaaacgatgaccggggctccgtggagatcaacgctcagggatgt
tactccacagtgtgtgtggagctggacctgcagagcctggcggtgaacaccatcctccag
tcgcagcatgtcaacgacatggagggcggagccagtctgggcgtcagctttgacgtgatc
cagcaggggtcgttggaggacatgatgtcaggaaaccagggtgccagcgccctcgccagc
tacgatgaaactgccctctgctccaacacgttcaggatcttgaagagcatggtggtcgga
tgggtcagggagatcacgcagtaccacaacgtgtacgcggacaaccaggtggtgcatttc
taccgctggctgcgctcgccgagctcgctgctgtacgacccggcactgcaccgcaccctg
cacaacatgatgaagaaggtgtttctgcagctggttgctgagtttaaacgtctgggctcc
actgtggtttacggaaactttaacaggatcatcttgagtactaaaaaacggaggatagat
gatgccatcgcctacgtagaatacatcaccaacagcatacactccagggaaatcttccac
tccctgtccatctccttctcccgctgctgggagttcctgctgtggatggacccggctaat
tttggtggcgtgcagggcaagctgccgtccagtgtcctgtatggagaggaaggaaccaaa
cagaagaaaagcagacaagagggggaagatgaagacgagagtgaagacgaggatgtggtg
gaggaagatgatgcagacggagagaccgaagaagtcgaagagctgattgaaagcagctgg
aacatcatgcattatcttccccaaacagcttcctgccagaaatacttcctcatgattgtc
tcagcctacattgctgcagtttaccacagcatgaaagaggagctgaggcgtaacgctcct
ggagccactccggtgaagagacgtggcggcagccaggcttcccagcaggcggttggggac
ttgagtgcacttcctggaatgatctccttctcccaggaatatgtggccagcgagctgacg
cagaacatcttcaccatcactcaaaagatccagaagaaggtgacagggtccaggaatgta
actcagacgtcggagctgttccccgtcctgcccggctcccacctcccgctcaacaagcca
gcgctggagttcgtcaaatatgtctgccaggtcctttcactcgatgccaacatcgtgaat
caagtgaacaaattaaagcgagacctcctgcgcctcgtggatgtgggagagttctcagag
gaggcccagttccgggacccctgtaactcctacatcctgccagaagtcatctgccaccac
tgtaacttctgtcgggacctggacctctgcaaggacccctccatggcacaggacgggtct
gtcttgcctcagtggttctgttcaagctgtcaggtccagtatgagaaggactcgattgag
atggctctggttgaagctctgcagaagaaactcatgagctacacgctgcaggacctggtg
tgcatcaaatgtaagggagtgaaggaaggaaacatgcccctctactgcagatgtgccgga
gacttcgacctcacttactcagccaagagcttctctgagcagatcacggtgtttcagaac
atagcgtcccactacaacatgaggttcctggaggagaccattgactggctgcttgtgatg
agtcctcagatcagccgctga
DBGET
integrated database retrieval system
