Kryptolebias marmoratus (mangrove rivulus): 108234412
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Entry
108234412 CDS
T05608
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108234412 (smarcad1a)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108234412 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CUE
HTH_70
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
108234412
NCBI-ProteinID:
XP_017269083
LinkDB
All DBs
Position
LG1:21482139..21492503
Genome browser
AA seq
1061 aa
AA seq
DB search
MSLFNLDRFRFMKKGANKEEQVCGTKSPDSEKENRPARMKPVKTPSKSHARGVVFEEVVT
IDLEEDEVISEPKKKTTPTQKFKSPVWKAASDYTDDEDNDMDEKMNKLLEMFPQLTRTDV
LEIIRDTSTLEGAVAACLLKFGDKEAQSQGRKRKQDESSSSQDSGEIQPSKKRRPSVASD
EEENDEKEPNWEKQEAMVRRLQRRFPDQDKEELRMVLQEHYWNVKDALQVLQLFSDTENS
SSSSADSQEQKSKSKDKSSRDHADSRNHKYEDGEKTVDCKDDEDHRNHSESDGSDANDTD
VTKDSEDDSESEDSKSSKIKSDFSVRSSWIAKKADSVPSSSSVRPTSTSSFVTPSSSSST
SQTVSRYASETSIAMKQAAERKKAARASRKTDSSDGESDYDEDSVTSEFEESDDELDAEG
GKPNVRKEIVAFFQNATIDELSLIAGCSVKKAQRIVELRPFDTWESLWDVFHKGNGLSED
LLQGCKVVLKERKVVLGLMSKCETISSKMVKRVTKVMDNGMGSSKQPSILNSQFELKPYQ
LIGLKWLLLLHEHNLSGILADEMGLGKTIQAIAFLAQLYENEIQGPHLIIVPSSTLDNWV
RELKLWCPSLKVLIYYGSVEERRYLKHDILNQEVEFNVIVTTYNSAIGNENDRSLFRKLH
LKYAVFDEGHMLKNMNSLRYRHLMSINADHRLLLTGTPLQNNLLELMSLLNFIMPSMFSS
STMQLSKMFSMKSYEEQSRFERDRISQAKLIMKPFILRRVKSEVLKQLPAKEEKIEFCSM
SEKQKALYKALIKKLKTSTNGEKRELCNVMMQLRKMANHPLLHRQYYTTEKLKAMSKLML
KEPTHFDASAALIQEDMEVMSDFELHRLCRQYSSISSYQLDNSLLLDSGKFHHLKELLAS
LKSQGDRVVLFSQFTMMLDIVEVLLKHLHHRYVRLDGSTPIADRIVLIDEYNTDPEIFVF
LLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVQVIKLISKDSIED
CILQLGHKKLKLEQDMTAAEQGVEGTIPEDMASLLKASLGL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttcaacttggaccggtttcgtttcatgaagaaaggagcaaacaaagaagag
caggtttgcggcaccaaaagtcctgattctgaaaaggagaataggccagctcggatgaaa
cctgtcaaaaccccatcaaagtcccacgcacgaggagtggtttttgaagaagtcgttacc
atcgacttggaggaggacgaagtaatctccgaaccaaagaaaaaaaccaccccgacccag
aagtttaagagccctgtttggaaggcagcatccgattatacagatgatgaggacaacgac
atggatgagaaaatgaacaaattgctggagatgtttcctcagttgacaagaactgatgtt
cttgagatcataagggatacaagcacgctggaaggagctgtcgctgcctgccttttaaaa
tttggtgataaagaagctcagagtcaaggcaggaagagaaagcaggatgaatccagcagt
tctcaggacagtggtgagattcaacccagcaagaaaaggagaccatcagtggcctctgat
gaagaagaaaatgacgagaaagaaccaaactgggagaagcaggaggccatggtgagaaga
cttcaaagaaggtttcctgaccaggataaggaggagctgcgaatggtgcttcaagaacac
tactggaatgttaaagatgctctgcaggttctgcagttgttctcagacacagaaaatagc
agttcctcctcagctgattcacaagagcagaaatcaaagagcaaagataagtcaagtaga
gaccacgcagattctaggaaccacaaatatgaggatggtgaaaagactgtggattgtaag
gatgacgaggaccacagaaatcacagtgaatctgacgggagcgatgcaaacgacacggat
gttacaaaggacagtgaagacgattcagagtcagaggacagcaaaagttccaaaatcaaa
agtgacttctctgtccgttcttcgtggattgcaaaaaaagcagattccgtcccttcatcc
tcttctgtcaggccaacatctacctcttcctttgtgacgccttcctcttcctcctcaacc
tctcagactgtgtccagatatgccagtgagaccagcattgctatgaagcaggcagcggag
aggaagaaggcggcacgtgcctcacgcaaaactgacagctctgatggggaaagtgattac
gatgaggactcggtaaccagcgagttcgaggagtcggacgatgagctagacgctgaaggt
ggaaagccaaatgtaaggaaggagattgtggcgtttttccagaacgctactatagatgag
ctgtctttgatagctggctgttctgtaaaaaaggcccagaggattgtggagctgaggcct
tttgatacctgggaaagcctgtgggatgtgtttcacaagggaaatggactttcagaagat
ttgctgcagggctgcaaagttgtcctcaaggagcggaaggtcgtcttgggactcatgtcc
aagtgtgaaaccatttcttcaaaaatggttaaacgggtcaccaaggtgatggacaatgga
atggggtcttcaaaacagcccagcatactcaacagccagtttgagcttaaaccgtatcag
ctgattggtctgaagtggctgttgctcctgcatgaacacaatctgagtgggatcctcgca
gatgaaatgggtttggggaaaactatccaggcgatagcatttctggctcagctgtatgaa
aatgaaattcaaggtcctcatcttatcattgtgccttcctctacactggataactgggtt
cgagagctgaagttgtggtgtccaagccttaaagtccttatttattacggatctgtcgaa
gagcggcgctacctcaaacacgacatcctcaaccaggaagtggagttcaatgtcattgtg
accacgtataactcggctataggaaacgaaaacgaccgcagccttttccgcaaactgcat
ctaaagtacgctgtgtttgatgaaggccacatgttgaagaacatgaactccctgcgctac
cgtcaccttatgtctattaacgctgatcatcgcctgctgctgacaggaactcctttacaa
aacaacctcctggagctgatgtctctcctgaacttcatcatgccctccatgttctccagc
tccacaatgcagctctccaaaatgttttccatgaaatcttatgaggaacaaagccgtttc
gagagggatcgtatttctcaggccaaactcatcatgaaaccgtttatcctccgacgagtc
aagagtgaggtccttaagcagctgccggctaaagaagaaaaaatcgagttctgctcaatg
agtgagaaacagaaggctctctacaaagccctcattaaaaaactgaaaacttccactaat
ggagagaagcgcgagctgtgtaatgtgatgatgcagttgaggaaaatggccaaccatcct
ctccttcatagacagtattacaccacagaaaagcttaaagccatgagcaaacttatgctt
aaggagccaacccactttgatgccagtgctgctctgattcaggaagacatggaagtgatg
tcagacttcgagctgcatcgcctgtgtcggcagtactcctccatcagctcctaccagctt
gataacagccttctgctggactctgggaaattccaccaccttaaagagctgctggcctcc
ctaaaaagccagggagacagagtggtcctattcagtcagtttaccatgatgttagacatt
gtggaagtgctgctcaaacatcttcatcatcgttacgtccgactggatggatccacacct
atagctgacaggattgtgttgatcgatgagtacaacacagaccctgagatattcgtgttt
ctgctatcaacccgtgccggagggctcggcatcaacctcacctcagcaaatgttgtcatc
ctgcacgacatcgactgcaatccttacaacgacaaacaggccgaggatagatgtcaccgt
gtgggccaaaccaggactgtccaggtgatcaagctgatcagtaaggacagcatagaggac
tgcatcctgcagctcggccacaagaagctaaagttagaacaggacatgaccgctgctgaa
caaggtgttgaggggaccatacctgaagatatggcgtctttactcaaagcctccctggga
ctgtga
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integrated database retrieval system
