Kryptolebias marmoratus (mangrove rivulus): 108234422
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Entry
108234422 CDS
T05608
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03022
Basal transcription factors
kmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108234422 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
108234422 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108234422 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108234422 (gtf2h3)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108234422 (gtf2h3)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108234422 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
PUB62-63_C
Motif
Other DBs
NCBI-GeneID:
108234422
NCBI-ProteinID:
XP_017269101
UniProt:
A0A3Q3BA81
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All DBs
Position
LG1:complement(19400902..19404495)
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AA seq
299 aa
AA seq
DB search
MASEEETNLLVIVVDVNPIWWGQQAQREPEFTLSKCMDAVMVMGNAHTAMNRTNKLAVIA
SHCQVSHFLYPTKSLKAGDGGGDVASSKDGKYELLSVANNIIAEEIKSIMSKTEVTGNST
DTLLAGSLAKALCYINRVSKELEVGQDIKSRILVIKAADDCALQYMNFMNVIFAAQKQNI
LIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSDQRSQLVLPPPAHV
DYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQIVKPKKKKLKLPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaggaggaaactaatctcctggtcattgtggtggatgtaaatcctatatgg
tggggtcaacaagctcagcgcgagccggagtttactttgtccaagtgtatggatgcagtc
atggtgatgggaaacgctcacacagccatgaacaggacaaacaagctggctgtcattgct
agccactgtcaagtcagccacttcctgtatcccacaaagagtttgaaagctggggatggc
ggtggtgacgtagcctccagcaaggatggaaaatacgaactcctgtccgtcgctaacaac
attattgctgaagagatcaagagcattatgtcaaaaactgaagtgacgggaaactcgacc
gacactctgctggcgggatcccttgctaaagctctctgctatattaacagggtctcaaaa
gagctcgaagttggacaggacatcaaatcgaggatattggtgataaaagcagccgacgac
tgcgccctgcagtacatgaacttcatgaatgtgatttttgctgcacaaaaacagaacatc
ctgatagacgcctgtgtgttggactcagattcaggactccttcagcaggcttgtgatata
actggaggcttgtacctgaaaataccgcagaaagtagctctggcacaatatctgctgtgg
gtgttcctgcccgactcggaccagcgctcccagctggtgctgccgccgccggcccacgtg
gactacagagctgcctgtttctgccaccggaacctcatcgaaatcggatacgtgtgctcg
gtttgtttgtcaattttctgcaacttcagccccatttgcacaacatgcgagaccgccttt
aaaatccaactaccacagatagtcaagcccaaaaagaagaaactcaagctgccagcgtga
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integrated database retrieval system
