Entry |
|
Symbol |
gtf2h3
|
Name |
(RefSeq) general transcription factor IIH subunit 3
|
KO |
K03143 | transcription initiation factor TFIIH subunit 3 |
|
Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:kmr00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108234422 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
108234422 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:kmr03021]
108234422 (gtf2h3)
03400 DNA repair and recombination proteins [BR:kmr03400]
108234422 (gtf2h3)
Transcription machinery [BR:kmr03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108234422 (gtf2h3)
DNA repair and recombination proteins [BR:kmr03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108234422 (gtf2h3)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG1:complement(19400902..19404495)
|
AA seq |
299 aa
MASEEETNLLVIVVDVNPIWWGQQAQREPEFTLSKCMDAVMVMGNAHTAMNRTNKLAVIA
SHCQVSHFLYPTKSLKAGDGGGDVASSKDGKYELLSVANNIIAEEIKSIMSKTEVTGNST
DTLLAGSLAKALCYINRVSKELEVGQDIKSRILVIKAADDCALQYMNFMNVIFAAQKQNI
LIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSDQRSQLVLPPPAHV
DYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQIVKPKKKKLKLPA |
NT seq |
900 nt +upstreamnt +downstreamnt
atggcatcagaggaggaaactaatctcctggtcattgtggtggatgtaaatcctatatgg
tggggtcaacaagctcagcgcgagccggagtttactttgtccaagtgtatggatgcagtc
atggtgatgggaaacgctcacacagccatgaacaggacaaacaagctggctgtcattgct
agccactgtcaagtcagccacttcctgtatcccacaaagagtttgaaagctggggatggc
ggtggtgacgtagcctccagcaaggatggaaaatacgaactcctgtccgtcgctaacaac
attattgctgaagagatcaagagcattatgtcaaaaactgaagtgacgggaaactcgacc
gacactctgctggcgggatcccttgctaaagctctctgctatattaacagggtctcaaaa
gagctcgaagttggacaggacatcaaatcgaggatattggtgataaaagcagccgacgac
tgcgccctgcagtacatgaacttcatgaatgtgatttttgctgcacaaaaacagaacatc
ctgatagacgcctgtgtgttggactcagattcaggactccttcagcaggcttgtgatata
actggaggcttgtacctgaaaataccgcagaaagtagctctggcacaatatctgctgtgg
gtgttcctgcccgactcggaccagcgctcccagctggtgctgccgccgccggcccacgtg
gactacagagctgcctgtttctgccaccggaacctcatcgaaatcggatacgtgtgctcg
gtttgtttgtcaattttctgcaacttcagccccatttgcacaacatgcgagaccgccttt
aaaatccaactaccacagatagtcaagcccaaaaagaagaaactcaagctgccagcgtga |