Kryptolebias marmoratus (mangrove rivulus): 108234426
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Entry
108234426 CDS
T05608
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11 isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108234426 (tfip11)
Spliceosome [BR:
kmr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108234426 (tfip11)
Other components
Complex C specific factors
108234426 (tfip11)
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
108234426
NCBI-ProteinID:
XP_017269108
UniProt:
A0A3Q3B406
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Position
LG1:complement(17782537..17787792)
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AA seq
840 aa
AA seq
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MFIFEMSMSHLYGRREEEEEGVEVESFEVTDWDLANEFNPDRRRFRQTKEQATYGIWAER
DSDEDERPSFGGKKSKDYTVPVSFVSGGLRKTAAEEKQLEKEGGSDDSDDDDDDSAAPPP
PSRVTAPRKLQMGNFRGHQSQRFAGGVQSGQGIGSWEKHTKGIGQKLLQKMGYQPGKGLG
KNAQGIINPIEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSDEEEEKEFQKELGQWRKDP
AGSAVKKKPKYSFKTVDELKAKGKMANRSTPASAGELAQVKVIDMTGREQKVYYSYSQMS
NKHSVPDEAPPSLSSRDQKGASFALPELEHNLQLLIDLTEQDILQSARRLQHENDVVVSL
SHESQALQGRLEAEQKAIQRMEAVLALVERFPSEETAPGEGPTLQECAQIFETLQTDYYE
EYKTMGLADLAVSVVHPLLKEKLFSWDPLKDSTYCLEDIGLWRAILESRDMHSSGPHSDM
DPYHRLLWEVWIPVMRSCVSGWQPRMVGPMVDCVEMWAPLLPAWILDHLMEQIILPRLQR
EVDSWNPLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDASARLILQP
WKNVFTAGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVIDWEGMLSPSSLVSLL
DKNFFTKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDVLLSQPLIKEKFNEALDIMNRA
VSSGMGGYMQPGARENIAYLTQTERRKDFQYEALQERRDAESVAHRGISAGVPTNFKDLI
QTKAEENNIVFMPLVGKRHEGKQLYTFGRIVIFIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtttattttcgagatgtcaatgtcccatctttacgggcggagggaggaggaagaggaa
ggtgtggaggtagagagctttgaggtgacagactgggatctggccaatgagttcaacccg
gaccgtcgcagattcaggcagactaaggaacaggcaacttacgggatctgggccgagagg
gattcagatgaagacgagaggcccagctttggtggcaagaagtctaaagactacactgtt
ccagtgagctttgtgagtggtggtttgcgtaagactgcagctgaggagaaacagctggaa
aaagaaggaggctcagacgactctgatgatgatgatgatgattctgctgcacctcctcct
ccttcccgtgtgactgcgcctagaaaactccagatgggtaatttccgtgggcatcagtcc
cagaggtttgctggtggtgtacagtctggacagggtatcggcagctgggagaaacacaca
aaagggattggacaaaaacttctgcagaaaatgggctaccaacctggaaaaggcttgggc
aagaatgctcaaggtattataaacccaattgaggcaaaggttcgtaaaggtaaaggagca
gtcggtgcttatggcaatgagcgaactcagcagagtcttcaggactttcctgtggttgat
tcagatgaagaggaagaaaaggaatttcaaaaggaacttggccagtggcgtaaagatccg
gctggttctgcagtgaaaaagaaacctaagtactccttcaaaactgttgatgagctgaag
gcaaaaggtaaaatggcaaatcgaagcacaccggcatctgcaggggagctggcacaggtt
aaggtaatagatatgactggaagagagcagaaggtgtactacagttacagtcaaatgtcc
aacaaacacagtgttcctgatgaagctcctccaagcttgtcctctcgagatcagaaggga
gctagctttgctctccctgagcttgagcataacctgcagcttctgatagacctcacagaa
caggacattttacagtctgccagacgtttgcagcatgaaaacgatgtagtggtttctctg
agccacgagtcccaagctttgcagggcagactggaggcagagcaaaaggccatccaaaga
atggaagctgtgttggcattagtggagcgtttcccctctgaggagacagcacctggagaa
ggaccaaccctacaggagtgtgctcaaatctttgagacattacaaactgattattatgaa
gaatataaaacgatggggttggcagacctggctgtgtctgttgttcatccgctgcttaaa
gagaaacttttctcatgggaccctttgaaggacagcacttattgtctggaagatattggt
ctgtggagagccatccttgaatccagagacatgcactcgagtggtccacactcagatatg
gatccttaccacagactgttatgggaggtgtggatcccagtgatgcggtcttgtgtgtca
ggctggcagcctcgaatggtcgggccaatggtggactgtgtggaaatgtgggctcctctt
ctgcccgcgtggatcctggatcacttgatggagcagattattttacccagactacagcga
gaggttgatagctggaaccctctaaccgacacggtgcctattcattcctggatccacccc
tggctgcctctgctccagtcgcgtctcgagcctctttacccaccaattaggagcaaactg
tccaacgctttgcagcggtggcatcccagcgacgcgtcagcccgcctcattcttcagccg
tggaaaaatgttttcacagctggtgcatgggaggcattcatggtgaaaaacatcatcccc
aaactagcattatgcctggaagaactggttatcaaccctcaccagcagcagatggagcca
tttcactgggtgatagactgggagggcatgttgtccccctctagcctagtttccctgctg
gacaaaaacttcttcacaaaatggctgcaggttctgtgttcatggctgagcaatagtcca
aactatgaagaaatcactaaatggtacctcggctggaaaagcatgtttagtgacgttttg
ttgtcacagccactcatcaaggagaaattcaatgaagctttggacatcatgaaccgtgca
gtgtcttctggcatgggtggttatatgcagcctggtgcaagagagaatattgcgtatctc
acccagacagaaagacggaaggactttcagtatgaagcgctgcaggagcgcagggatgct
gagagtgtggctcacaggggcatcagtgctggtgtgccaactaactttaaggatctcatt
cagaccaaagcagaggagaacaatattgtcttcatgcccttagtgggcaaacggcacgag
gggaaacagttgtacacatttgggcgtatcgttatcttcatagacaggggcgtagtgttt
gtgcaaggagagaagacctgggttcccacttctttgcagagtctgatagatatggcaaag
tga
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