Kryptolebias marmoratus (mangrove rivulus): 108234610
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Entry
108234610 CDS
T05608
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108234610 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108234610 (usp39)
Spliceosome [BR:
kmr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108234610 (usp39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108234610
NCBI-ProteinID:
XP_017269441
UniProt:
A0A3Q3B5X3
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Position
LG1:complement(19083965..19089473)
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AA seq
499 aa
AA seq
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MISLKREREEEVDDDDNEDGVAAKRGRGPVVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGQKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKTFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLTP
EEKEALLLTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTE
KEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLSEYLTEE
AQATEKNTSYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEA
YIQIWKRQGSSDTNSHTGE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttaaagcgagagagagaagaggaggtggacgacgatgataacgaagacgga
gttgcagccaaaagaggacgaggacctgtagtagaagaccggagaagccgccactgccct
taccttgacacaataaacaggagtgtgcttgattttgactttgaaaagctctgctccatc
tctctttcccacatcaatgtttatgcttgcctcatatgtgggaaatactttcaaggcaga
ggtcagaagtctcatgcatacacccacagtgtccagtttacccatcatgtgttcctcaac
ttgcacacactcaagttttactgtctgccagataactatgagatcattgattcatcatta
gaagacatcacgtatgttctgaagccaactttcactaagcagcacattgcagggctggac
aagcagggtaaactgtacagagcctacgatggtacaacctacctgccgggcattgtgggc
cttaacaacatcaaagccaacgactacgccaacgtggtgttacaggctttttctaatgtc
ccacctttgcgaaactacttcctggaggaggaaaactacaagggaatccgcagaccgccg
ggggacatcatgtttctcctggtccagaggtttggtgagctgatgcgcaaactttggaat
cccagaaacttcaaggcccacgtgtctccccatgagatgctgcaagctgttgtgctgtgc
agcaagaaaacgtttcagatcaccaagcaaggtgatgcggttgactttatgacgtggttc
ttgaacgctcttcacggcgcccttggaggcacgaagaaaaagccatcaataatcacaaaa
gcatttcaaggctccatgcggatcttctccaagaaacttccacacccagacttgacgcca
gaagaaaaggaagctttgctgctgacagaggagtaccaggagcagatgtctgagtccacc
ttcctgtttctgacccttgacctcccaacagctcctctgtacaaggacgagaaggagcag
cttataatcccacaggttcccctcttcaacatcctgggcaagttcaatgggaatacagaa
aaggaatacaaaacctacaaggagaattttctcaaaaggttccagctgaccaagctgcca
ccttacctcatcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaaaaat
ccaacaatcgtcaattttccaatcacaaacgtagacctttctgagtatctgacagaagaa
gctcaagctacagagaagaatacttcttacgaccttgttgcgaacgtcgtgcacgacggg
aaacccactgaaggatcgtacagaatacatgtcctgcatcacggcacagggaagtggtac
gagatgcaggatctgcaggtgatcgacatcctgccccagatgatcacgctgtcagaagct
tacatccagatctggaagagacaaggaagcagtgacacaaacagccacacgggggagtaa
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