Kryptolebias marmoratus (mangrove rivulus): 108234629
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Entry
108234629 CDS
T05608
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X2
KO
K10896
fanconi anemia group M protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108234629 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108234629 (fancm)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
108234629 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
MRC1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108234629
NCBI-ProteinID:
XP_017269477
LinkDB
All DBs
Position
LG10:10954819..10986592
Genome browser
AA seq
2023 aa
AA seq
DB search
MSGGSNQRTLFQTWGACISQNKSVQPARGGKKAAESRRTASSSNVTQVATTHPPRNSPWT
VIGQESTSASEKPARAEHDIPADEEDDDDLMIVAVYEAERNLQLENPSCFQDHSVSESTA
LSPTPTPSCGRIYPDFPGFDSSSAKVWIYPTNYPVREYQLKMSEAALFQNTLVCLPTGLG
KTFIASVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGIPQAHMAELTGSTAAKQ
RQEVWRSKRVFFLTPQVMVNDLSRDTCPAEQVKCVVIDEAHKALGNHAYCQVIRLLSSQT
LQFRILALSATPGGDTKSVQSVISNLLVSHIELRSEESPDIQAHSHQRTVEKVVVPPGET
LSAYQTRYLQVLGKFMSRLAQNRVIGHKDLRTLSKYQLILARDQFRKSPPPHIQGPQRGM
LEGDFALCISLYHGYELLMQTGLRSLFFYVQGIMDGSREMSRTKNELQRTPTFMDLYHEM
EAMFLKPPAGPDEPFIYSHPKLEKLEEVVLQHFKVWAERSANTNGSEGVSTRVMIFSSFR
ESVQEIAAMLDRHAPLIRVMTFMGQASAGKGVKGFTQKEQLEVVHRFRQGGFNTLVSTCV
GEEGLDIGEVDLIVCFDAQKNPIRLVQRMGRTGRKRQGRIVVILAEGREERTYNQSQSNK
RSVYKSITGNKSGFHMFPNSPRMLPEGVNPKLHKMFITCGQFDHSESSRRSVRGRRSHSE
GRGSLIHPQNLLQQGSRASDGFLSSTEYSLWASTMKLEEREAHPCLKPSRFLSIPGDPEH
QEDVSRGRPPSRELSLWEWRHWQHKALPVHAVDHSLRCSHFIKVMELIDSMREETEGECH
YEQELLPYLHKEDAEKNRPKKQKGTKLCNKSTNRKPKPPHAAWSELERIDEETERENATG
AGLVSSLAVTKQKLPVENDSEVPCDEATDHLGPEGESSNNEENDSAIMNVTEAGQALADL
VNLDGISQVNDKNDEDFELQTMFYLPKWNSGPVFHSKPREDTSLKAILANVAELLSRSPP
SLADVLEEDEAAPFLPPSPQPPQPPFRVSFSLDVDDDEENEVVADDVPLVPDLDKSSGGK
DELLVEAAASSPTWDEVFEDDEVTFEANREAEFKCRHDSKEEHEMKSKNDGTAKERDDWD
GMRDELTSHMMGSDVKDNATVRFQMDHSMDLFEDDEAFLQMTIPDILTPEDGVTPGTSLN
SRNNNNTDNNTAPVYSSPKPSRLPGGTHMTESEGRNQTLNSGLPTQSKPVTDEPQKVAPH
LNSSIQGNPESKDGSHHVFSVNFDLGSLLEDSEDDTEDGALPSSSSPAKQNHSAVSLPPV
SKSSTPINSFNRLFSQSKVSLARMPTGCGMLKREALLSPIPSSGARRTLAPGPARLASFS
FKQTGNSSRQECVPRINSPPPPPECCSDSEEEVVFHKRRRENKVNPLSSPEVSKITSDVD
SPVVVKKKRFSARNPLDETLGKAASDDDFRDDSTFARGPSAPAAKRKERQHVREQSAKRH
KARQFLDEEAELSEDEEGAGVSSDEEDGDDLDRSLAGFVVDNTHLSQELNDSEMHGVYLK
SVRSPAVQGKFKMSYRNHHNMDIFSQVPEMDETYSEDSFVVGSDEEEPDSYEEEAEDVEL
MPEASYVDGRRQYATRRRVFLHKARAGAGSESGAGPPSEPRAAAKAKRSRVIRIHDSSEE
ELDGGSERVDLGTGGHDASLQPNKRRQGTTVEKSTPSPATLASKVSLLNKAQRSSVSEEQ
RNQRCRQNVENQHLLSNELDFVESEFSSKKEPQELPTASSVPDLPAKEPPSLPGSACILV
DSRCLSSGVELLASLRQRHAAAVHVCSLDGSYFIVSSRMAVERQSQSDLASTQNRKRLIE
RISSLLGLFERVCLIVEKDRTKTGEISRLFQRTRYYDSTLAALVGAGIRLLWSAGAEESA
GLLADLAKLEHRKGQGISVPLEVKGQHRQQALQLYLSLPSVSYVHALSLSHNFSSIAQLM
NSSIEAIQKGGCMSRPRAEEIYRFLRYSCDSALVNASKAGKRN
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggttcaaaccagagaactttgttccagacttggggtgcctgcatttcccaa
aacaagtctgtccagccagcaagaggaggcaagaaggccgctgaatcccgcaggacagct
tcaagcagcaacgtaactcaggtagccacaacacatcctcctcgaaattctccatggaca
gtaatcggtcaggaatccacaagtgcatcagagaaaccagcgagggcggagcacgacata
cctgctgatgaagaagacgatgatgacttgatgatagttgctgtctatgaagctgaaagg
aaccttcagcttgaaaaccccagctgctttcaagaccattcagtatctgaaagcacggct
ctttctcctacccctaccccatcatgtggacggatatatccagactttccaggctttgac
agctcctcagctaaagtatggatctaccccaccaactaccccgtcagggagtaccagctg
aagatgtcagaggctgccctgtttcagaacacacttgtgtgccttcctactggtctgggg
aaaaccttcatagcctctgtggttatgtacaacttttaccgctggtatccatcaggaaag
attgtgttcatggctcccaccaagcctctggtggcccagcagattgaggcctgttacaaa
gtgatgggaatccctcaggcacacatggctgagctgacaggcagcacggcagcgaagcag
agacaagaggtttggaggtccaagcgggtcttcttcctcacccctcaggtcatggtgaac
gacctgtccagagacacctgcccagccgagcaggtcaagtgtgtggtaatcgatgaagcg
cataaggcactgggcaaccatgcctactgccaggtgatcagacttctcagcagccagact
ctgcagttccgcatcctggctcttagtgccactcccggaggagatacaaaatcggtgcag
tcggtgatctccaatttgctcgtctcccacattgagctgcgttcagaggagagcccggac
attcaggctcattcccaccagcgcaccgtggagaaggtggtggttcctccgggtgagacc
ctgtcagcgtaccagacacgctacctgcaggtgctggggaagtttatgtctcgcctcgct
cagaaccgggtgatcggccacaaggaccttcggactctcagcaaataccagctcattctg
gccagggatcaattccgcaagagcccgccgccacacatccagggtcctcagcggggaatg
ctggagggcgactttgccctttgcatcagcctgtaccacggctacgagctgctgatgcag
acgggcctcagatcgcttttcttttatgtccagggaatcatggacggatccagagagatg
tccaggaccaagaacgagctccagaggacgcccacatttatggacctgtaccatgagatg
gaagccatgtttctgaagccacctgctggtccggacgagccgtttatttacagccacccc
aaactggagaaactggaggaggtggtgctgcagcactttaaagtgtgggccgagcgctcc
gcgaacacaaatggttccgagggagtaagcacacgcgtgatgatcttctcgtctttccgc
gagagcgtccaggagatcgcagccatgctggaccgccacgctccgctgatcagggtcatg
acgtttatgggccaagcctcggctggaaaaggggtcaaaggcttcacccaaaaggaacaa
ctggaggtggtgcacaggttccgacagggaggcttcaacacgctggtgtcgacctgtgtc
ggggaagaggggctggatatcggagaggtggacctcattgtctgttttgatgcgcagaag
aatcccatccgccttgtgcagaggatgggacggactggacgcaagcggcaggggcgcatc
gtggtcatcctcgctgagggacgggaggagaggacctataatcagagccagagcaacaag
cgcagcgtgtacaagtccattactggcaataaaagcgggttccacatgttcccaaatagt
ccccgcatgctgcctgagggcgtgaaccccaaacttcacaagatgttcatcacctgtggc
cagttcgaccacagcgagagcagcaggaggtccgtcaggggccggcgctcccactccgag
ggacgggggtccctcatccaccctcaaaacctgcttcaacaaggcagccgagcgtctgac
ggctttctgagcagcacggaatattctttgtgggcgtccaccatgaagctggaggaacgg
gaagctcatccgtgcctgaagccgtcccgcttcctgtcaatacccggcgacccagaacat
caggaggatgtttccagaggcaggccaccgtccagagagctgtctttgtgggaatggaga
cactggcagcacaaagcgcttcctgtccatgccgttgatcattccctccgctgcagccac
ttcatcaaggtgatggagctcatagacagcatgagagaggaaacagagggggaatgtcat
tacgaacaggagcttcttccttaccttcataaagaagacgctgagaaaaacagaccgaag
aaacagaagggcacaaagctctgcaataaaagcaccaacagaaagcccaaaccccctcac
gctgcctggtctgagctggaacgtatcgatgaggaaacggagagggaaaatgcgactggt
gcagggttagtttcctcactggctgtaacaaaacaaaaacttcctgttgaaaatgactct
gaggttccttgtgatgaggccacagatcacttaggacccgagggagagtcttccaataat
gaggaaaatgactctgccatcatgaacgtcaccgaggcaggtcaagcgctcgcagatctt
gtgaatctggacggtatttcacaagtgaatgataaaaatgatgaagattttgagcttcag
accatgttctacctcccgaaatggaattcaggaccagtcttccactccaaaccaagagaa
gatacgagtctgaaggccatcctcgccaatgtggctgagcttctgtctcgatctccgcca
tcgctggccgacgttttagaagaggacgaagccgcgccgttccttccaccttctcctcag
ccgcctcagccaccgttccgcgtcagtttcagtctggacgtggacgacgacgaggaaaac
gaggttgttgctgacgatgtgcccctcgtaccggatttagataaatcctccgggggtaaa
gatgagctccttgtcgaagcagcagccagcagtcccacctgggatgaggtgttcgaggac
gatgaagtcacttttgaagccaacagggaggcagaattcaaatgccgacatgattccaag
gaggaacatgaaatgaagagtaaaaatgatggcacggcgaaagagcgtgacgactgggac
ggcatgagggacgagttaacgtcacacatgatgggtagcgacgtgaaggataacgccact
gtacgcttccagatggatcacagcatggatctgtttgaggacgatgaagccttcctgcag
atgacaattccagacattctcactccggaagatggcgtcacacccgggacatccctcaac
tccaggaacaacaacaacactgacaacaacactgcacctgtgtattcgtcaccaaaacca
tcccggttacctggcggcacacacatgactgagtcggaaggcagaaaccagactttaaac
tcaggacttcccactcaaagtaaacctgtcacagatgagccacagaaagttgctcctcat
ttaaattcttcaattcaaggaaacccagagtcaaaagacggctcccaccacgtcttctct
gttaatttcgacctcggttctttactcgaagactccgaagacgacacagaggatggcgct
ctcccttcctcttcatcgcctgcaaagcagaatcactctgctgtgtctctgccacctgtt
tctaaatcatccacacctattaacagcttcaacagactcttcagtcagtccaaggtttcc
ttggcacgtatgccgacagggtgtgggatgttgaaacgggaggccctcctgtctccaatc
ccatcctcgggagccaggaggacactcgcgcccggtcctgccaggctggcgtccttcagc
ttcaaacaaacaggaaacagctctcgacaggaatgtgttcccaggatcaactctcctcct
cctcctccagagtgctgcagcgatagcgaggaggaagtcgtgtttcacaaacggagacgt
gagaacaaggtcaacccgttgtcgtccccagaagtgtctaagatcacgagtgacgtggac
tccccagtggtggtgaagaagaaacgtttttctgcacgcaaccctctggatgaaacgctg
ggcaaagctgcttccgacgatgatttccgggatgactccacgttcgcacgcggaccctca
gctccagcagctaaaaggaaagaacgccaacatgtcagagaacagagcgccaaacgccac
aaagcgcgtcagtttctggacgaggaggccgaactgtcggaagatgaggagggggctggc
gtttcgtctgacgaggaagacggcgacgacctggatcggtctcttgccggcttcgtggtc
gacaacacccacctctcccaggagctgaacgactcagagatgcatggggtttacttgaag
tcggtgagaagccctgcggttcagggcaaattcaaaatgtcctacagaaaccatcacaac
atggacattttctctcaggtgcctgagatggacgagacgtattcagaggacagctttgtg
gttggcagcgatgaagaggagccggacagctacgaggaagaggccgaggacgtagagctc
atgcccgaggcctcgtacgtggacgggaggaggcagtacgcaaccaggcggagggttttt
ctgcacaaagccagagctggagccggatccgagagcggcgccggccctccgtctgagcca
agagccgcggcgaaagccaaacgctcccgggtcatacgcattcacgattccagcgaggag
gagctggacggagggagcgaaagggtggatctcggcacaggaggacacgatgcttctttg
cagccaaacaagaggcgacaaggaaccactgtggagaaatctactccttcacctgccact
ttagcttccaaagtctcattgttgaataaagcacaaagaagctcagtgagtgaagagcag
agaaaccagaggtgtcggcagaacgtagaaaaccagcatcttctctctaatgagcttgac
tttgtcgagtccgagttttcctcgaagaaagaaccccaggaactccccactgcttcttca
gtgcctgacctgccagcgaaagagccgccctctctgcccggctctgcctgcatcctggtg
gacagccgctgcctcagtagcggcgtggagctgctggccagcctgcgtcagcggcacgcc
gcggcggtccacgtgtgctccctggacggcagctacttcatcgtcagcagccgcatggct
gtggagcggcagagccagtcggacttggcctcgacgcagaacaggaagcggctgatcgaa
agaataagcagcctgctcgggttgtttgaacgggtttgtctgatcgtggagaaggatcga
accaaaacaggcgagatctcacgtctgtttcagcgcactcgttactacgacagcacttta
gcggcgctggtgggcgcaggcatccgcttgctgtggagcgccggcgccgaggagagcgcc
ggcctgctggctgacctggcgaagctggagcaccgtaaaggtcagggcatctctgtgccc
ctcgaggtcaaagggcagcacaggcagcaggccctgcagctgtacctgagcctgccttca
gtcagctacgtgcacgctctcagcctgagccacaacttctcttcgatcgcccagctaatg
aacagctcgattgaggccatacagaaaggaggctgcatgagtcgacccagagccgaggag
atctatcgcttcctgcgctactcctgtgactcggccctcgtaaatgcatcaaaagcagga
aaacgcaactag
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integrated database retrieval system
