Kryptolebias marmoratus (mangrove rivulus): 108234634
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Entry
108234634 CDS
T05608
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108234634 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108234634 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108234634 (usp30)
04121 Ubiquitin system [BR:
kmr04121
]
108234634 (usp30)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108234634 (usp30)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108234634 (usp30)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
108234634 (usp30)
Ubiquitin system [BR:
kmr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108234634 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
108234634
NCBI-ProteinID:
XP_017269479
UniProt:
A0A3Q3B0K5
LinkDB
All DBs
Position
LG1:complement(18350630..18356322)
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AA seq
505 aa
AA seq
DB search
MLWCRPESSDKLVGEFLGTGPAIRNKMIKNWGVIGGIAAAIAAGVYVMWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSGLPSIQSCKDNQLSTTLLQLLKAL
SSDEPGDEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERNRQPKVTHLF
DVQSLENLSNQENKTMACISRAPLHPIPDPWKFQHPFHGRLTSNMSCKHCEIQSPVRYDS
FESLSLSILLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQSTTLNGQVFESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSGEGTPIKRQEHVEFAEFLSMDRYKHNSSTQILRLKR
AAKAPQAESLNDSTEKPKANGTDRDNNNKTFSNGTCSSVFLRSPGFNPQFGLTYDYSVFP
SSSTEYLFQLTAVLVHHGDMHSGHFVTYRRSPSSPRGSSAFSSQWLWVSDDSVRKSSLHE
VLSSNAYMLFYERVRRPSLSPCSDE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagagagctccgataagcttgtaggggagtttcttggcacagga
cctgcaatcagaaacaagatgataaagaactggggtgtcatcggagggatagcggctgcg
attgcagctggagtttatgtcatgtggggcccgatcacagagagaaagaagaggaagaga
ggtatggttccaggtctgctaaatctgggcaacacctgcttcttgaactctttgctccag
ggcttggcagcatgtccgtccttcatcagatggttggagaagttctcaggtctgccctcg
atccagtcctgtaaggacaaccagctgtccaccacgctgctgcaactcctaaaagctctg
tccagtgacgagcctggggatgaagacgttctcgatgccggatgcctgctggacgttctc
agactgtaccgctggcacatcagctcgtttgaagagcaggatgcgcacgagctttttcac
gtcctcacgtcttctctggaggaggagcgaaaccgacaacccaaagtcactcatttgttt
gacgtgcagtccctggagaatctttccaatcaagaaaacaaaacaatggcctgcataagt
cgagctcctcttcatccgatcccggatccttggaagtttcagcatccttttcacggccgt
ttaacaagcaacatgtcatgtaagcactgtgaaatacagagtccagtgcgatacgactca
tttgagagcctctccctgtccatcctgcttcctcagtggggtcggcccatctctttagat
cagtgcctgcagcattttatttcatcagaaacaatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaaagtacaactctaaacggacaagtttttgaaagccagaggacgaca
tttgttaaacagctaaaacttggaaagctccctcagtgcctgtgcatccacctacagagg
ctgacgtggtccggtgaaggaacgcccatcaagcggcaggagcacgtggagttcgcagag
ttcctatccatggaccgctacaaacacaacagctccacgcagattttgcggctcaaacgg
gctgccaaagcgccacaggcagaaagtttaaatgattccacagaaaaaccaaaagcgaat
gggactgatcgagacaacaacaacaaaactttctctaacggaacctgttcttctgtgttt
cttcgctctcctggttttaacccacagtttggcctcacatacgactacagcgtctttcct
tccagctcgacggagtacttgttccagctcacggccgtgctggttcaccacggggacatg
cactcgggccacttcgtcacgtaccgccgcagtccttcctcgccccgcggctcctcggcc
ttcagctcgcagtggctttgggtgtcggacgactcggtgcggaagtccagcctgcacgag
gtgctgtcctcgaacgcctacatgctcttctacgagagggttcgaaggccgagcctcagc
ccgtgctcagatgagtga
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