Kryptolebias marmoratus (mangrove rivulus): 108234668
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Entry
108234668 CDS
T05608
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108234668 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Other domain-containing proteins
Patched domain-containing proteins
108234668 (ptchd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
108234668
NCBI-ProteinID:
XP_017269530
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All DBs
Position
LG21:complement(10664348..10677793)
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AA seq
952 aa
AA seq
DB search
MLRQVLHAGLGTCFHALGRFVAGHPVFFASAPVLLSILLGASFSRYRVEEDVESLLAPKH
SLAKIEGNLVESLFPVNRSRHALYSDLQTAGRYGRVIITARKGSVLDPLHLETILQLHRR
IYQMQVTVPATGFNSFNYSFSYLCLPDDKNVCIIDDIIRAMEKIQSARASNQTIPVLRYP
ITQLADGRKAYIGHQLGGVQGWGGAVRIQGTGSKVEGVRSARAVQLTYYLQSRSGLMDRV
ASQWEKAFCAELKHFGALHPKLGLYSSTSSSLRTDFQFSTVLARRPLLASLGVCGVLAIL
CSSMRDCVRSKPWLGLLALLSVTLSGLTAAGILNLTGATYNSTYLGIPFVMLGHGLFGSF
EMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTMIHLMTLGLAASPLTNMEAVRLFCRT
AALTISISYVYMLSFYSSCLVFTGYLETRYRHGCFCRRVPKQDRLDSKPAWYRCLMYTRY
QDETQSTNLPHGVGHTQTLNSNLSHTETLTPNSSGVRGHLNNSTNTHPHSHTHSTASMDS
HPQDSHLLLGCVRRCYGDWITNTYVKPFVVLLYLVYISFALMGFLQVTQGSDPSALVAMD
TATVLYTRAQQRYFSSYSPVIGFYIYESAPYWNASVQRDLLEYAKGFQRISWLEAYLNYL
LDRNESTSQPRENFTHTLRHSFLREPQFAHFEDDIIFAERGQGEEPDVAASRIFLVAKTT
ENKREEMSVLLDTLRRLSLTSRVRFLIFNPSFVYLDRYATAVSSPLRHSLLAVLFLLGLS
SLAIVEPLVSVWLGLTLLSVQFGVLGFMTLWGVEMDCMSVLCLISALGHSADCSGPLLCG
FASGRGESRTRWVRLALERHGVPSLQTLVCYSAALVPVGFIRSNLTSTLFRCLTLTAGCS
ALHTLAFLPTLLTFLPPSKSRDHRPGREGQRQEVECVEMNDSTRVVDQITTV
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccaggtgttgcacgcgggactcgggacctgcttccacgcgctcggccgcttc
gtggccggccacccggtgttcttcgcctcggctcccgtgctcctgtccatcctgctgggc
gccagcttcagccggtaccgcgtggaggaggacgtggagagcctgctcgcgcccaagcac
agcctggccaagatcgagggcaacctggtggagagtctgttccccgtgaaccgctccagg
cacgcgctctactccgacctgcagacagcgggccgctacgggcgcgtgatcatcacagcc
cgcaaggggagcgtgctggacccgcttcacctggagactatcctacagctgcacagacgg
atctaccagatgcaggtgacagtcccggccacaggcttcaacagcttcaactactccttc
tcctacctctgtctccccgatgacaagaacgtctgcatcatcgatgacatcattcgtgcc
atggagaagattcagtcagctcgtgcctccaaccaaaccatcccggtcctgaggtacccg
atcacccaactggcagatgggcgaaaagcatacatcggccaccagctgggtggcgttcag
ggctggggtggagcagtgcgaattcaggggacggggtccaaagtagagggcgttcgttct
gccagggcagtgcagctcacctactacctccaatcccgaagcggcttaatggatcgagta
gcgagccagtgggaaaaagccttctgtgccgagttgaagcactttggagctttgcatcca
aaactggggctctactcatccacgtcatcctctctgaggacagatttccagttctccact
gtgctggcacgtcgacccctgttggccagcctgggggtatgcggggtgctggccatcctc
tgcagctccatgagggactgtgtgaggtccaaaccctggttgggactgttggcgctgctg
tcagtcacgttgtcgggcctcactgctgctggaatactgaacctgacaggagccacgtac
aactctacatatctgggaatcccttttgtcatgctcggccacgggctcttcggttccttt
gagatgctgtcgtcatggaggcgaacacgggaggaccagcacgtgaaagagcgtgtggca
agtgtgtttgaggatgtcatgctgcgtttctccggatccactatgatccacctgatgact
ctaggcctggccgcctcgccactcaccaacatggaagcggtccggcttttctgccgcacc
gctgccctcactatcagcatcagctatgtttacatgttgtcgttttacagctcttgtctg
gtgtttacgggctacttggagacccggtacagacacggctgcttctgccggagagtcccc
aaacaggaccgattggactctaaaccagcttggtaccgatgtttgatgtacactcgttac
caggatgaaacgcaatcaaccaacctgccacacggagttggccacactcagacgctaaac
tcgaacttatctcacacggagacgctcacgccgaacagctccggtgtgcgcggacatcta
aataactccacaaacacacatccgcactctcacactcattccacagcaagtatggactct
catcctcaggattcgcaccttttactgggatgtgtgcggcgttgctatggcgactggatc
accaacacttatgttaaaccctttgtagttctgctgtacctggtttacatctcctttgca
ttgatggggttcctacaggtgacccaagggtctgacccaagtgcattggtcgccatggat
acagcaacagtactgtacacacgtgcccagcagcgctacttcagctcatactctcctgtg
attggattctacatctatgaaagtgccccctactggaatgcctcagtacagcgggacctg
ctggagtacgccaaaggcttccagagaatcagctggctggaggcttacctgaactacctg
ttggaccgcaacgagtccaccagccagccacgggagaacttcacccacacactgcgccac
tccttcctccgcgagccacagttcgcccactttgaggatgacattatatttgccgagcgt
gggcagggcgaggagcctgatgtggcagcttcacgcatctttctggtcgccaagacgacg
gagaacaagcgtgaggagatgtcagtgctgctggatacgctgcgtcgcctgtcgctcact
tctcgtgttcgttttctaattttcaacccctcctttgtctacttggaccggtatgctaca
gcggtcagctcccccctcagacactcactgctggcggtgctcttcttgttggggctgtcc
tccctggccattgtagagccactggtgtccgtgtggctaggtcttaccctgctgtctgtc
cagtttggggtgctgggcttcatgactttatggggtgtggagatggactgcatgtctgtg
ttgtgtctaatctcagctctggggcactccgcggactgcagtggtccacttctttgtggc
tttgcctcaggtcggggtgagagcaggactcgctgggttcgattagctttggagagacac
ggcgtcccttctttacagacgctcgtgtgctacagcgccgccctggtgcctgttggtttt
atacgctcaaacctcacatccacactttttcgctgcctcactctcacggccggctgctcg
gccctgcacacgctggccttcctgcccaccctcctcaccttcctacccccctccaagagc
agagaccaccgtccaggaagggagggccagagacaggaggtggagtgtgttgaaatgaat
gacagcactagagtagtggaccaaattaccactgtttga
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