Kryptolebias marmoratus (mangrove rivulus): 108234783
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Entry
108234783 CDS
T05608
Symbol
neo1a
Name
(RefSeq) neogenin 1a
KO
K06766
neogenin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04350
TGF-beta signaling pathway
kmr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108234783 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108234783 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108234783 (neo1a)
Cell adhesion molecules [BR:
kmr04515
]
Immunoglobulin superfamily
DCC/UNC5 family
108234783 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
NDNF
fn3_2
C2-set_2
SusE
Sp38
GH101_dom-5
DUF4998
V-set_CD47
EphA2_TM
TM_ErbB1
PRIMA1
Motif
Other DBs
NCBI-GeneID:
108234783
NCBI-ProteinID:
XP_024861277
LinkDB
All DBs
Position
LG15:24154759..24344207
Genome browser
AA seq
1510 aa
AA seq
DB search
MAERGALALLSLLCLTSLCSETAAAANKNVDKGSAAQPFIPFRFTMEPQDTLAIRGSSAL
LNCSTNSDVATPPRIEWRKDGTFMSLVSDERRRILPDGSLFFAHVVHSKHNKPDEGTYQC
VATIDNLGSISSRTARLSVAGIPRFASQPSPASVYLGDSQVMACEVNYDLVPFTRWEKDR
QPLELSARLTQLPGGALVISNASEADTGLYRCLVENVGSSKFSDEAQLQTIPETGEERKL
EFLVQPASVTKLMGTSVLLPCVVAGFPAPHVRWMFGDKLLEESEGRVEVVGGGSLQLSNI
AEEDAGVYTCVAENPNSTIEAQAQLTVQVPPQFVKRPANTYAHESMDIVFECEVSGSPAP
TVKWVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDGGNVQSSAQLIILDH
DVALPSSPPPPLTPNTADHVTPGSGGVAGPAGPTPSGPRDVVASLVSTRFIKLTWRQPAE
PHGDDLTYSVFYSQEGTSRERVVNTSRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGESS
APLKVATQAEVQVPGPAPNLQAVSNSPTSVSLSWDKPLTGNGEVLTYKLYYTDRGVGTEQ
DVDTDGQSYTMTGLKKNTEYSFRVVANNKHGPGVSTEDVMVRTLSDVPSAPPQNLSLEVQ
NSKSIMLRWQPPPLSGQNGEIVSYKIRYRKGSRRSESAVTTAGTQLYKLVDGLEPGTEYS
FKVTAVTVNGTGPATEWTTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDI
VVRGYTISYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAN
TRPQSDPIDPNVDLYDLFHPPYTPVPDPTPMMPPVGVQASVLSHDTIKVTWADSSLSKNQ
KITDNRYYTVRWKTNIPANAKVKMANSTTLSHVVSGLKPNTQYEFSVMVTKGRRFSTWSM
TAVGTTLETIPSSAPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAVVH
DWVIEPVVGNRLTHQIQDLTLDTTYYFKIQARNSKGMGPMSEAVQFRTPKTESSDKMAND
QASNPPPKPGLPGSPHPHDPGTPLGKTGVGGGENHILVIVVIISVGAFTIIVVVVGAFLC
TRRTTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPDPNPVMTE
TPIPRSSQDITPADSGLESTPHLQQRRNSYRGHESEDSMSTLSGRRGMRPKMMMPFDAQP
PQPVISAHPIHSLDNHHHHYHMGSLVSPTRSYLYHQGSGWHACAAPISHLDRVDSTESVR
NTPCSEPLPPPVTVASSQVSCPSEILADPEGSYHGSTTTEDEPSYSSNLPPHRSAHPHAH
AHPLKSFAVPAIPASGHPSYESSALPSNPLLAQSGPPTHPHVVKTASIGTLGRTRSPMIV
TVPNAPDVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLM
KDLNAITTAP
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctcttgcgctcctctctctcctgtgtctcacctctctctgctcg
gagaccgccgccgccgccaacaagaatgtcgacaaaggttcagcagcgcagcccttcatc
cctttccggttcaccatggagccccaggacacgctggccattcgggggagctcggctctg
ctcaactgctcgacgaacagcgacgtggccacgccgccgcgcatcgagtggaggaaggac
ggcacgttcatgagcctggtgtcggacgagcggcggcgcatcctccccgacggctcgctc
ttcttcgcccacgtggtccactcgaagcacaacaagccggacgagggcacgtatcagtgt
gtcgccacgatcgacaacctggggtccatctccagccgcacggcgcgcctctctgtagca
ggtattcccaggtttgccagccagccctcgccggcctccgtttacctcggggacagtcag
gtcatggcgtgcgaggtcaactacgacctggtgccgttcacccgctgggagaaagaccgc
cagccgctggagctgagcgccaggctcacgcagctgcctggcggcgctctggtcatcagc
aatgcctcggaggccgacactggtctttaccgctgtctggtggaaaacgtcggctcctcc
aagttcagcgacgaggcccagctgcagacgatacctgaaactggagaggagaggaagctg
gagttcctggtgcagcccgcttccgtgaccaagctgatgggcaccagcgtgctgctgccc
tgtgtggtcgccggcttccccgcgcctcacgttcgctggatgtttggagacaaactgctg
gaggagagcgagggtcgtgtggaagtggtgggaggcggcagtctccagctctccaatatc
gcagaggaggatgctggtgtgtacacctgtgtagcggaaaaccccaactccaccattgaa
gcccaggcccagctcacagttcaagttcctcctcagttcgtcaagcggccagccaacacc
tacgcccacgagtccatggacatcgtcttcgagtgcgaagtgtcgggctccccggccccc
accgtcaaatgggtgaagaacggcgacgcggtcatccccagcgactacttcaaaatcatc
aaggagcacaacctgcaggtcctgggcctggtgaagtcagacgagggcttctatcagtgt
ctggcggaaaacgatggcgggaacgtccagtcgagcgcccagctcatcatcttggatcac
gacgtagccctgccctcctcccctccccccccactgactcctaacactgctgaccatgta
acgccaggctccggaggcgtcgccggcccggcgggccccaccccgtccggcccccgagac
gtcgtggcctcgctggtctccacccgcttcatcaagctgacctggcgccagccggccgag
ccgcacggggacgacctgacgtactcggtgttctacagccaggagggcaccagcagggag
cgggttgtgaataccagccgtcccggagagatgcaagtcaccatccagaatctgatgccg
gacaccaaatatcgcttcagagttgtggctcacaacagcaacgggcagggcgagagctct
gcgccgctcaaagtggccacccaagctgaagtccaagtcccgggccccgcccccaacctg
caggcggtgtcgaactcgcccacctccgtgtctctcagctgggacaaacccctgacgggc
aacggagaggtcctcacctacaagctgtactatacggacagaggcgtcggcactgaacag
gatgtggacacggacggtcagtcctacacaatgacgggactgaagaagaacacggagtac
agcttccgcgtcgtggccaacaacaagcacggcccaggagtctccaccgaggacgtcatg
gtccgcacgctctcagacgttccgagcgcccctcctcaaaacctctctctggaggtccag
aactcaaagagcatcatgctgcgctggcagccgccaccccttagcgggcagaacggggag
atcgtcagctacaagattcgctaccggaaaggatcccggaggagcgaatcagccgtcacc
accgcgggcactcagctttacaagctcgttgatggtctcgagcccgggacggagtactcc
ttcaaggtgacggcggtgacggtgaacggcacgggaccggccaccgagtggaccacagca
gagacgttcgagagcgacctggacgaatcccgcgtgcccgaccagccgagctccctgcac
gtccgaccgctggtcaacagcatcgtggtgagctggacgccgcccgagaaccaggacatc
gtggtgcgcggctacaccatcagctacggcatcggaagcccccacgctcagaccatcaaa
gtggactacaaacagcgctactacacgatcgagaacctcgaccccagctcccactacgtg
atcacgctgaaggccttcaacaacgtgggggaggggatccccgtgtacgagagcgccaac
acccgaccgcagtcagaccccatagaccccaatgttgacctgtatgacctcttccatcct
ccatacaccccagtacccgaccccacccccatgatgcctcccgtgggcgttcaggcctcc
gtgctgagccacgacaccatcaaggtgacgtgggccgacagctcgctgtccaagaaccaa
aagatcacggacaaccgctactacaccgttcgatggaagaccaacatccccgccaacgcc
aaagtgaagatggccaactccaccaccctgagccacgtggtgtcgggcctgaagcccaac
acgcagtacgagttctccgtcatggtgaccaaaggccgccgcttcagcacgtggagcatg
acggccgtgggcacgaccctggagaccattcccagctcagcccctaaagatgtgactgtg
gtgagcaaagaaaacaaaccgcgcaccataattgtcaactggcagcctccctcggaagcc
aacggaaaaatcaccggttacatcatttactacagcacggacgttaacgcagtggtgcac
gactgggttatcgagccggtggtggggaaccgcctcacacaccagatccaggacctgact
ctggacaccacctactacttcaagatccaggcccgcaactcgaagggcatgggccccatg
tcggaggccgtccagttccgcacgccgaagactgagtcctctgacaaaatggctaatgac
caagcctcaaatcctccaccaaaaccaggacttccaggcagcccacatccacatgaccct
gggactcctcttggtaaaacaggtgtcggaggtggtgaaaatcacatcctggtcatcgtg
gtcattatctcggtgggagccttcaccatcatagttgtggtcgtgggtgccttcctgtgc
acacggcgcaccacctcccaccagaaaaaaaaacgggccgcctcaaagtcctcaaatggc
tcccacaaatacaaggggaactccaaggacctgaagccgccggatctttggattcatcac
gagaggctggagctgaaacccatggacaagtcgccggatcccaaccccgtcatgacggag
acacccatcccgcgcagctcccaggacatcacgccggctgacagcggcctggagagcacc
ccccacctgcagcagaggcgcaactcctaccgtggccacgaatcagaagacagcatgtcc
acactatcaggccggcgagggatgaggcctaaaatgatgatgccgtttgacgcgcagccg
cctcagcccgtgattagcgctcaccccatccattccctcgataaccatcaccaccattat
cacatgggcagcctggtgtcaccgacgcgcagctacctctaccaccagggcagcgggtgg
cacgcctgcgccgcccccatctcccatctagacagggtggactccacagagtcagtgagg
aacaccccctgctcggagcccctgcctccgcccgtcaccgtcgcctcctcgcaggtctcc
tgcccgtccgagatcctggccgaccccgagggcagctaccacggctccaccaccaccgag
gacgagcccagctactccagcaacctgcccccccaccgctcagcccacccgcacgcccac
gcccacccgctcaagagcttcgccgtgcctgccatcccggcctcgggccatccgtcgtac
gagtcgtccgccctgcccagcaaccccctgctcgcgcagagcgggcctcccacccaccct
cacgtggtgaaaacggcctccatcgggacgctgggcaggacgcgctcgccgatgatcgtc
accgtgccgaacgcccccgacgtaccggagaccagcaagatgctggaggacgtagacagc
gtgcttgcctccctgcccccctgcccctcccctgccccccgcagtaaccctgttcctctc
cctcagagctacgagcccgacgagctgaccgaggagatggcccacctcgagggcctgatg
aaggacctgaacgccatcacgacggcaccgtga
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