Kryptolebias marmoratus (mangrove rivulus): 108234785
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Entry
108234785 CDS
T05608
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108234785 (lingo1b)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
108234785 (lingo1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_9
LRR_Zer-1
LRR_LRWD1
LRR_R13L1-DRL21
V-set
Ig_C17orf99
LRRNT
C2-set_2
Ig_5
Zn_ribbon_TFIIS
Motif
Other DBs
NCBI-GeneID:
108234785
NCBI-ProteinID:
XP_017269736
UniProt:
A0A3Q2ZZN2
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Position
LG15:25568029..25592539
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AA seq
623 aa
AA seq
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MTVLVSSRMVSGEAGGHRYLVVCWQPILILMLGTVLSGSTTGCPSKCDCNAQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFGNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGYKLASVPTDALSHLHNLLSLRLRYLNVTVIRDYSFKRLY
RLRALEISHMSALETMTPKCLFGLNLTLLSITNCNLTVIPYEAISHLRYLRFLNLSFNPI
LTVEGNQLFNLQKLQAFHLAGGRLVAIEHYSFRGLTHLRILNVSSNSLSTLEESVFHSVG
NLETLALYGNPLACDCRLLWVFRRRWRLNFNKQQPICASPEVVRGKEFKDFSDILPPDYF
TCQKSKIVDYKVQESHVDEGTTVYFSCQAEGNPAPVIMWFSPKKEYITTKTMGSRLSVCS
DGTLEVRYSQIQDNGTYVCIASNAAGNDTKSAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIVATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEETEEASPTEAPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgtccggggaggcaggagggcacagatacttg
gtggtatgctggcagcccattctgatcctgatgctgggcaccgtcctttcaggctccacc
actggctgcccttcaaaatgtgactgcaatgcccaagagcgttcagttgtgtgccatcga
cgacgactggcagcccttcctgagggcatccccactgagacaagactgttagacctcagc
aaaaaccgtttgaagactctggggcctgaagagttcattaattaccctcagctggaggag
ctgcagctcaacgaaaacactatttcatccatcgagcctggggcttttggcaacctgatg
aaccttcgaactctaggcttgcgcaacaaccagctcaagcttattcagctaggggtgttt
acaggcttgaccaacctcacacagctggatataagtgagaacaaaattgtcattttgctt
gattatatgttccaagagctgtacaacctgagggctttagaagttggtgacaatgaccta
gtcttcatctcacctcgatcatttcacggtctcagcaaccttgaaagcctcaatatagag
ggatacaaactggcctcggttcccactgatgcccttagccatcttcataacctgttgtca
cttcgattgcgctatctgaacgtcactgtcataagggattactcctttaaaaggttgtat
cgactaagagcactggaaatttctcatatgtctgccctagaaaccatgacaccaaaatgc
ttgtttggactcaacctcacattgttgtccatcacaaactgtaatctcactgtcatcccc
tacgaagccatcagtcacctcagatatcttcgatttttaaatctctccttcaatcccatt
cttactgtggaagggaaccagttattcaatctacagaagcttcaggctttccatttagct
ggtgggagactggttgccattgaacattactctttcagaggactcacccatcttcgtatt
cttaatgtttcaagcaatagcttgagcacccttgaggaatctgtctttcactcagtggga
aatctggagaccctggctttgtatggcaacccattggcgtgcgactgtcgcttactgtgg
gtcttccgtcggcgatggaggctcaactttaacaaacagcaacccatttgtgcttcacct
gaggttgtacgaggaaaagagttcaaagatttttcagacatactccctcctgactacttc
acctgccagaaatcaaagattgtggattacaaggtacaagaaagccatgtagatgaagga
actacagtttatttttcctgccaagcagaaggtaatccagctccagtgataatgtggttt
tcccctaagaaggaatacataactacaaagactatggggtcaagactttctgtgtgtagt
gatggtactctggaggtgcgctattctcagatccaggacaatggcacctacgtgtgcatt
gccagtaatgcagcaggcaatgacactaaatctgctcacctttttgtgcatagctactct
cccaattggccccaccagccaaacaagacctttgctttcatttccaaccagccaagtgat
gaaggtgctaatgtgactcgggcaacagttccatttccatttgatgtaaaaacccttatt
gttgcaactaccatgggatttatctcttttcttggagtggtcctcttttgtcttgtcata
ttattcctctggagtagagggaaagacaataccaagtcaagtattgaggttgaatatgtg
ccacgtaaagaggaaacagaggaggccagtccaactgaagcacctgtacaattcaacatg
aaaatcatgtga
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