Kryptolebias marmoratus (mangrove rivulus): 108234795
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Entry
108234795 CDS
T05608
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108234795 (lrp4)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108234795 (lrp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
DUF5050
EGF_CA
Motif
Other DBs
NCBI-GeneID:
108234795
NCBI-ProteinID:
XP_017269749
LinkDB
All DBs
Position
LG15:26591397..26717564
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AA seq
1920 aa
AA seq
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MQPAAVLRGVLLATLLLSQSPGVHGSTDCSCGRNHFTCAVSAFGECTCIPAQWQCDGDND
CGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPAPRECEEDEF
QCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDKDCKD
ESDEENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVE
FMCSSGMCINSGWRCDGEHDCDDQSDEKNCTTSMCTADQFRCGTGRCVRLSWRCDGEDDC
SDRSDEEGCEKTESPPCAPDQFQCGNGRCIGQRKVCNEVNDCGDGTDEHPHHDCRPRSSE
GNCNQNNGGCSQKCQMARGQVQCTCHTGYRLTDDSKTCQDVDECAEEGYCSQGCTNIEGG
FQCWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDF
HHSRELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRI
EVANLDGTHRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVIADT
HLFWPNGLTIDYASHRIYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYW
TDWHTKSINSANKFTGKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHLCL
PSNKTYTCACPTGFKKVDHYSCANSLDKFLLFARRTDIRRISFDTEDMSDDVIPLADVRN
AVALDWHDKDGYIYWTDVTTDSINRALWNGTKQEVVVDTSLESPAGLAIDWVTNKLYWTD
AGTDRIEVSNADGTMRTVLIWENLDRPRDIVVDPTGGFMYWTDWGANPKIERAGMDASNR
IVIISSNLTWPNGLAIDYETRRLYWADAGMKTIEYGNFDGSDRQVLIGSQLPHPFGLTVH
EDKLYWTDWLSKSIHSADKLTGLECHTLAENLENLMDIHMFHRHREIVHNPCAVNNGGCS
HLCLLAPAPKASSCSCPTGINLQSDGKTCTPGMSSFLIFARRTDIRMVSLDIPYFADVVL
AVNSSMKNTIAIGVDPKEGKVYWSDSTLKKISRANINGSAHEDIISTGLMTTDGLAVDAV
GRKIYWTDTGTNRIEVANLDGSMRKVLIWQNLDSPRAIALYHEMGYMYWTDWGEHAKLER
SAMDGSDRVVLISNNLGWPNGLAIDTAGSQLLWADAHTERIEASDLNGQNRRTLVTPVPH
PYGLTLLGPHIYWTDWQTRSIQRADKNSGANTITVRANLPGLMDIQAVDRQRPMGFNKCS
KRNGGCSHLCLPRPNGTSCACPTGILLNGDGRSCEDSPETYLLFSNRVSVRRISLDTSDH
TDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGSGMETVISQGLKTTDGLA
VDWVSRNMYWTDTGRNTIEVARLDGTSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIA
KIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQVLVS
PVSHPFALTQSKPVSSPLTPFSRLSQQDRWIYWTDWQTKSIQRVDKHTGRNKETVLANVE
GLMDIIVVSPHRQTGTNLCGINNGGCTHLCFAKTNSFVCACPDEPDGRPCSTISGYIPTS
PAKGASSTPVPKKIPKTPTDTPHRGPLPINCTDRNLNAEGCLSTVVTAPHGEGLHISYVI
GGVLTILAILILIAAFIIYRHKKSKFAEPGVSNLTYSNPSYRTSTQEVKIEASQKPPIYN
QLRYKKEGGVDGGYTKEKIRIVEGVCLLSNEELYWDDLKQIKPSRGGLHTCIRTDTVSLQ
ASSASLDDGETEQLLQEEASECSSITTLTPSAITPQRHAQHSLPDTGWASIRKPSTESEV
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggccgcggtgctgcggggcgtcctcctggcaactttgctgctcagccagagt
ccaggtgttcacggcagcacggattgttcctgtgggagaaaccacttcacatgtgcggtc
agtgcttttggggagtgtacctgcattcctgctcagtggcaatgcgacggagacaacgac
tgcggagaccacagcgatgaggatggatgcatgctccccacctgctcgccactggacttt
cactgcgacaacggcaaatgcatccgtcgctcctgggtctgcgacggggacaacgactgc
gaagacgactctgacgagcaagactgcccagctcccagggagtgtgaagaggacgagttc
cagtgccaaaacggctactgcatccgcagcctctggcactgtgatggcgacaacgactgc
ggggacaacagcgacgaacagtgcgatatgcgcaagtgttcagacaaggagttccgctgc
acggacggaagttgcattgctgaacactggtattgtgacggagacaaagactgcaaggat
gaatccgatgaggaaaactgcccctcggatgtgatgacagccacctgcagtgtggaggag
ttccagtgtgcatatggccgctgtatcctggacatctaccactgtgacggagacgatgac
tgtggagactggtcggatgagtcagactgctcttcccatcaaccctgcaggtcagtggaa
ttcatgtgcagcagcggcatgtgcatcaactccggctggagatgtgacggcgaacacgac
tgtgacgaccagtccgatgagaaaaactgcaccacatccatgtgcacagctgaccagttc
cggtgtggaactggacgttgtgtccggttgtcatggagatgtgatggtgaagatgactgc
tcggatcgcagtgatgaagagggctgcgagaaaactgagagtcctccgtgtgctcctgac
cagtttcagtgtgggaacgggcgctgtattggtcaaaggaaggtgtgtaacgaggtcaac
gactgcggtgatgggactgatgagcacccacatcacgactgccgaccgcgctccagcgag
ggcaactgtaaccagaataacggcggctgctcccagaagtgtcagatggccagaggacag
gtccagtgcacctgtcacaccggataccgactgacggacgacagcaaaacctgccaagat
gtggatgagtgtgccgaggaaggatactgcagtcagggctgtaccaacatagaagggggg
ttccagtgctggtgtgttcagggctatgagctccgacccgacaagcgcagctgcaaagct
ctgggtccagagccggtgctgctttttgccaaccgcatcgacatccgtcaggttttgcca
caccgctctgaatacaccctgctgctcaacaacctggaaaacgcgatcgcgctagacttc
catcacagccgcgagctggtcttctggtcggatgtgacgctggaccgcatcatgaaggcc
aacctaaacggctctaatgtggaggaggttgtctccactggtctggagagcccaggtgga
ctggctatagactggatccacgacaagctttactggacagactctgggacgtcccgtatc
gaggtggccaatttagacgggacacaccgcaaggtgttactgtggcaaaatatggagaag
cccagggccattgcactccaccccatagaaggtaagatctactggacagactgggggaac
acacctcgcatcgagtacgccaacatggacggctcgaaccggcgggtcatcgcagacacg
cacctgttctggcccaacgggctcaccatcgattacgccagccaccgcatatattgggta
gacgccaagcatcacgtcattgaaagagctgacctggatggacgcaaccgcaaggctgtc
atcagccaaggcctccctcatccatttgccatcacagtgtttgaggacagcctctactgg
accgactggcacaccaagagcataaacagcgccaacaaattcaccggcaagaaccaggag
gttatccgcaacaagctgcacttccccatggacatccacacgctgcacccgcagcgacag
cctgcaggtggcagaaaccgctgtggcaccaacaacggaggttgcagccatctgtgtcta
cccagcaacaagacctacacctgcgcctgtcccaccggcttcaagaaagtggaccactac
agctgcgccaacagtcttgacaagttcctgctttttgcccgaaggacggacatccgacga
atcagcttcgataccgaggacatgtccgatgatgtcatccctctggctgacgtgcgcaac
gctgtggcgctggactggcacgacaaagacggctacatttactggacagacgtcacgacc
gactccatcaacagagcactgtggaacggcaccaagcaggaggtggtggtggataccagt
ttggagagcccagcaggactggcaattgactgggtgaccaacaaactctactggacagat
gcaggtacagatcggatcgaagtgtcaaatgctgacgggaccatgcggactgttctgatt
tgggagaacctggatcgacccagggacattgtagttgacccaactggaggcttcatgtac
tggactgactggggtgccaatccaaagatcgagcgtgcgggaatggacgcctccaatcgc
atcgtcatcatttcatccaatctgacgtggcccaacgggctcgccatcgactatgagacc
aggcgtctgtactgggctgatgcaggcatgaagaccattgaatatgggaactttgatggt
tcggacagacaggttttgattggcagccagctgcctcacccttttggactcactgtacac
gaggacaagctgtactggaccgactggctgtccaagagcatccatagtgccgacaagctc
acgggtttggaatgccacacgctggctgaaaacctggagaatctgatggacattcatatg
ttccatcgacatcgggagatagtgcacaacccgtgtgcagtcaataatggaggctgtagc
cacctgtgtctcctggcacctgctcccaaggcttctagctgttcctgtcccactggtatc
aacctgcagagcgatggaaagacctgcacacctgggatgagcagcttccttatctttgct
cggaggacagacatcaggatggtttctctggatattccctactttgctgatgtggttcta
gctgtcaatagctcaatgaaaaacaccattgccatcggcgttgaccccaaagaaggaaaa
gtctactggtctgacagtacactgaagaaaatcagcagagccaacatcaatggatcggcg
cacgaagacatcatatctacaggattgatgaccaccgatgggctagcggtggacgccgtt
ggcaggaagatctactggaccgacacgggaaccaaccgcatcgaagtggccaacctggat
ggttccatgaggaaagttctcatctggcagaacctcgacagcccacgagcgattgccctc
taccatgagatgggttatatgtactggacagactggggagagcatgctaagctggagcgc
tcagcgatggatggatcagaccgcgtggtcctcatcagtaacaatctgggctggcctaat
ggcctggctattgacacggcaggatcgcagctgctgtgggctgatgctcacaccgagcgg
attgaggcatctgacctaaatgggcagaatcgtcgcaccctggtcactcctgtcccgcac
ccctacggtttaactcttttaggccctcacatctattggactgactggcagacccgcagt
atccagagagcggacaagaactccggagccaacaccatcacggtgcgagccaacctgcca
ggcctgatggacattcaagctgttgacaggcaaaggccgatgggttttaataagtgtagc
aagaggaacggaggttgcagccacctctgcctgcctcgtcccaacggcacttcctgtgca
tgtcccactggcattctgctcaacggagatggccggtcatgtgaggactccccagagact
tacctgctcttttcaaaccgcgtcagcgtgcgcaggatctccctggacaccagcgaccac
acggacgtgcacgtgcccgtgccggagctgcacaatgtcatctcgctcgactacgacagc
gtagacggtaaactgtactacacggatgtcaccctggatgtgatcaggcgggcaaatctg
gatggcagtgggatggaaacggtgatcagtcagggcctgaagaccacagatggcttggct
gttgactgggtgtccagaaacatgtactggactgatactgggcgcaacaccatcgaggtg
gcgcgcctggatggaacgagtcgcaaagtcctggtgaacaacagtttggatgaacctcga
gccattgcagtgttccccagcaaagggtttctgttttggactgactggggccacatcgca
aagatcgaacgctcccatctggatggatcggaccgcaaagtcctgatcaacacggacctg
ggatggcccaacggcctcactttagactatgacacacgaaggatcttctgggtggacgcc
cacttagacaggattgagagttcagacctgaacgggaaactgcgtcaggtcctcgtcagt
ccggtgtcccacccgttcgccctcacgcagtcgaagccggtgtcctcccctctaactcct
ttctcccgactctcgcagcaagaccgttggatctactggacggactggcagacaaagtcc
atccagcgagtggataaacacactggccgaaataaggaaactgtgctggccaatgtggag
gggctcatggacattatagtggtctctcctcacaggcagacaggtaccaacctctgcggg
ataaataatggcgggtgcacccacctctgctttgccaagaccaacagttttgtttgcgcc
tgcccagatgaaccagatgggcgaccgtgctccacaatttcaggttacatcccaacctct
cccgccaaaggtgccagcagcaccccggttcccaagaagatccccaaaactccaacagac
actcctcacagaggacccctgcccatcaactgcactgacaggaacctaaacgcagaaggc
tgcttgagcaccgtggtgacagcccctcatggagaaggcctccatatcagctatgtgatt
ggtggagttctcaccattctggcgatcctcatcctcatagccgctttcattatttacaga
cacaaaaagtcaaagtttgccgagccgggagtgagcaacctgacctacagcaacccctcg
tatcgaacgtccacgcaggaggtcaagatcgaagcgtcacagaagcctccgatatacaac
cagctccgatacaagaaagaggggggagtggacggaggctacacaaaggagaagatccgc
atagtggagggcgtgtgcctgctgtccaacgaggagctttactgggatgacctgaaacaa
atcaagccgtcccgtggcggcctgcacacctgcatccgcaccgacaccgtgtccctgcag
gccagcagcgcttcacttgacgacggcgagactgagcagctcctccaggaggaggcgtcc
gaatgctcctccataaccacgctgaccccctcggccatcaccccgcaacgtcacgcccag
catagcctgcccgacaccggctgggcttccatacgcaaaccctccaccgagagcgaagtg
tga
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