Kryptolebias marmoratus (mangrove rivulus): 108234800
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Entry
108234800 CDS
T05608
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108234800 (trpm5)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108234800 (trpm5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
DUF7695
Motif
Other DBs
NCBI-GeneID:
108234800
NCBI-ProteinID:
XP_017269766
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All DBs
Position
LG15:25740277..25766263
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AA seq
1229 aa
AA seq
DB search
MSEKQDTPLEPLQPQTRCLRCGDILEWSEEHSVLLGCSCCSTVDEAIENVARGMASRMKK
EKSHWAAGRVGDIDFIGSTKTRGKFMRVCSNTDPVLIYKMLTEEWGLAPPHLVVALVGGD
ELAQMKPWLRDTLRKGLVKAAQSTGAWILTNGLRFGITKHLGQAVRDHSLASTSSKVRVV
AIGIAPWNMIHNREALLTAKVDEPAAYKPQDLPHGSVYSLDSHHSHFVLVEEDPNRPGAT
SEMRVKLLKHISLQRTGYGGTGSFEIPVLCLLVHGEPRILKRMYKGIGNSTPWLILAGSG
GVADILVTLMDRGCWDTDSVQELLLDTFPNAHHSTDISNWVKLIQKILDHGHLLTVHDPE
QESSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSDIFNGDVEWKACDL
EEVMTDALINDKPDFVRLFVDNGVNLGEFLTYGRLQELYWSVSEKSLLHNLLLKKYEEKQ
LLLGAARTPGPPGHHPPEQGKPRFTLFEVAKVLKDFLHDSCKGFYQKIPTEKPAKGRLFH
SQKNLPELEERCEHPWRDLFLWAVLQNRQQMANYFWAMGPEAVAAALAGCKILKEMARLE
SEAESARSMKEAKYEQFALDVFGECYSNSEDRAYALLVRRTHCWSKSTVLNLATEADAKS
FFAHDGVQALLTKIWWGAMTTDTAISKLVVSFFCPPLIWTNLIKFSDEELDNRGGNKQFV
ELDSLDTEKALLLTDDDDPLDSSPGGPEAQSCATVWWRFLLRRWRRFWSAPVTVFLGNVI
MYFAFLCLFTYVLLLDFRPPPPFGPGAPEIMLYFWVFTLVLEEIRQSFFTDEEMNILKKF
KLYVEDNWNKCDMVAILLFVVGVSCRMVKDTYEAGRTVLAIDFMVFTLRLIHIFAIHKQL
GPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDPRIDWVFRRALYRPYLHIFG
QIPLEEIDAARMPEMNCTNDSEEIVMGLRPPCPNIYANWLVILLLVIFLLVTNVLLLNLL
IAMFSYTFQVVQGNTDIFWKFQRYNLIVEYYSRPALAPPFIIISHLSQLFFCLVKRPESK
QEHLERELPAGLDQRLITWETVQKENYLAKLERQHWESSEERLKSTSSKVQSLLKIVGGF
KDQEKRLTSMEAQVRYCGEVLSWMAECFANSTLKCGKEAPRAPTSLTGSKAGGTVDTPQS
HPEKEAKEEEAKPGHPGYGANKKFPYIDE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaacaagacacacctctggagccattgcagccgcagacgagatgcctgcga
tgtggggacatattggagtggtcagaggagcacagtgtcctccttggctgttcttgctgc
tcaacagtggatgaagctattgagaatgtagccagaggcatggccagcagaatgaaaaag
gagaagagccactgggcagctggcagagttggtgacattgacttcattgggtcaaccaag
acaagagggaagtttatgagagtgtgcagcaacacggatccagttctgatttacaagatg
ctgacagaggagtggggcctggctcctccacatttggtcgtggcattggtgggaggagat
gaactggctcagatgaaaccctggctcagggacactcttagaaaaggactggtgaaagca
gcacagagcacaggggcatggattttgactaatggccttcgctttggcatcaccaagcac
ttgggccaggcggtgagagatcactccttggccagcacctcctctaaagtccgagtagtg
gctattggcatcgcaccctggaacatgattcacaaccgagaggccctgctcactgccaag
gtggatgagcctgcagcttacaaaccgcaggacctgcctcacggttcagtgtattccctg
gacagccaccactctcactttgtgcttgtggaggaggatcccaacagaccaggagccacc
agtgaaatgagggtgaaactactcaaacacatttcccttcagcgcacaggttatggagga
acaggaagttttgagatccccgttctctgtctgttggttcatggggagcccagaatctta
aagagaatgtacaagggtattggaaattccacaccgtggctgattctggcaggctctgga
ggcgtggctgacatccttgtcacactgatggatagaggctgctgggacacagacagtgtt
caagagctgctgctggacacctttcccaatgcccaccacagcacagacatcagtaactgg
gtcaagctgatccagaagatacttgatcatggacatctccttactgtccatgacccagaa
caggaaagttctgaactggatactgtcattctcaaagctcttgtcaaagcttgtaaaagc
caaagtcaggaagctcaggatttcctggatgagctgaagctggctgtggcatggaacaga
gtggacattgccaaaagtgacatctttaatggagatgtggagtggaaggcttgtgacctt
gaagaagtgatgacggacgctctcatcaacgacaagccagactttgtgcgcctctttgtg
gacaacggtgtgaacctgggcgagttccttacttacggccgtctgcaggagctctactgg
tctgtctcagagaagagcctccttcacaacctgctactgaaaaagtacgaggagaagcag
ctcctccttggagcggccagaacgcctggtccacccggacaccatcctcctgagcaaggc
aaacctcgcttcaccctctttgaggtcgccaaagtgctgaaagactttctccatgactcc
tgcaaaggcttctaccaaaagattcccacagaaaagccagcgaagggccgattgttccac
agccagaagaacctgcctgagttggaggagcgctgtgaacatccttggcgagatctcttc
ctctgggccgtccttcagaaccggcagcagatggctaactacttttgggccatgggcccc
gaggcagttgcagcagcgctggcaggctgtaagattctaaaggagatggcgcgcctggaa
tctgaggctgagtctgcacgcagtatgaaggaggccaagtatgagcagtttgcccttgat
gtctttggagaatgttactccaacagcgaagacagggcttatgctttgttagtgagaaga
actcactgctggagcaaatctacagttctcaacttggcaactgaggcagatgctaaatcc
ttctttgcacacgacggagtccaggctctcctcacgaagatctggtggggggctatgacg
acagacacggccatctccaaactcgtggtgtctttcttctgcccaccactcatctggacc
aacctcattaaattcagtgatgaggaattggataatcgtggcggtaacaagcagtttgtg
gagctggatagtctggatacggaaaaggcattactgctaacagatgatgacgaccctttg
gactcttcacctgggggtccagaagctcagagctgtgccactgtctggtggcgcttcctc
ctccgccgctggcgtcgcttctggagcgctcctgtcaccgtgttcctcggcaacgtcatc
atgtacttcgccttcctctgcctcttcacctacgtgctcctgctagactttcgcccaccg
ccaccctttggccccggcgctccagagataatgctctacttctgggtcttcaccttggtg
ctggaagaaattcgacagagtttcttcactgatgaagagatgaacatcctgaagaagttt
aaactttatgtagaggacaactggaacaagtgtgacatggtggcaatcttgctttttgtc
gttggggtttcctgcagaatggtaaaagacacctatgaggcaggacggaccgttctggca
atagatttcatggtatttactctacgtctgatccacatttttgccattcataagcagctg
ggccctaagatcatcatcgtggaaagaatgatgaaggatgtcttcttcttcctctttttt
ctgagtgtgtggcttattgcatatggagttgccacccaggctcttctccatcccaatgac
ccaaggattgactgggtgttccgccgagccttataccgcccttatctgcacatttttggt
caaatccccttggaggaaatagacgctgctcggatgcctgaaatgaactgtaccaacgac
tcggaggaaattgtcatgggactacgacccccatgccccaacatctacgccaactggctg
gtcattctgctgctagtcatcttcctgcttgtcaccaatgttctgctgctcaacctcctc
attgccatgttcagctacaccttccaggtagttcagggcaatacagatattttctggaag
tttcagagatataacctgattgtggaatactacagtcgtccagctctggccccacccttc
atcatcatcagtcacctttctcagctctttttctgcctggtaaaaagacctgagtccaag
caggagcatcttgagagggagctgccagcaggactggaccagagactcataacatgggag
acggtgcagaaagagaattacctggcaaagctggaacgccagcactgggagagcagtgag
gagagactcaagagtacctcctcaaaggttcaaagcttgctgaagattgttggtggattt
aaggatcaagagaaacgactgacatccatggaagctcaggtcagatattgtggggaggtg
ctgtcctggatggcagaatgctttgctaacagcacactcaaatgcggaaaagaagcccca
agagctccaacatctctaacaggcagcaaggcaggcggcacagtggacacgcctcagagt
catccagagaaagaagccaaagaagaagaagccaaacctggtcacccaggatatggagcc
aacaagaaatttccttacattgatgaatag
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