Kryptolebias marmoratus (mangrove rivulus): 108234866
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Entry
108234866 CDS
T05608
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108234866 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108234866 (dhx15)
03009 Ribosome biogenesis [BR:
kmr03009
]
108234866 (dhx15)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108234866 (dhx15)
Spliceosome [BR:
kmr03041
]
Complex A
U2 snRNP components
U2 related factors
108234866 (dhx15)
Complex B
108234866 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108234866 (dhx15)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
Helicases
108234866 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_30
AAA_29
T2SSE
AAA_25
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
108234866
NCBI-ProteinID:
XP_017269931
UniProt:
A0A3Q2ZV35
LinkDB
All DBs
Position
LG7:7155260..7196626
Genome browser
AA seq
724 aa
AA seq
DB search
MRRDRDRDRNRDRGRDRDKDKTPVVGPSATASFLKQPPVQRQQINPFTCLPHTPRYHEIL
TKRLQLPVWEYRESFTDILMQNQCFVLVGETGSGKTTQIPQWCVEMMRSLPGPKRAVACT
QPRRVAAMSVAQRVADEMDVTLGQEVGYSIRFEDCSSAKTVLKYMTDGMLLREAMNDPLL
ERYGVIILDEAHERTLATDILMGVLKEVVRQRPDLKVIVMSATLDAGKFQVYFDKCPLLT
IPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEAGEGDLLLFLTGQEEIDEACKRIRR
EVDDLGPQVGDMKIIPLYSTLPPQQQQRIFEPPPPNRPNGGVGRKVVVSTNIAETSLTID
GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTCPGKCFRLYTEKAYK
TEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALND
NGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKAAD
EAKMRFSHVDGDHLTLLNVYHAFKQNHESTQWCYDNFVNYRSLMSADNVRQQLSRIMDRF
DLPRSSVDFSSRDYYLNIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKP
EWVLYNEFVLTTKNYIRTCTDVKPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLSSKE
GTPY
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgacagggaccgcgaccggaatcgagaccggggtcgagaccgtgacaaggac
aagacccccgtcgttggcccgtcggcgacggccagcttcctcaagcagcccccggtccag
aggcagcagataaatcccttcacctgcctgccacacacgccgcgctaccacgagatcctg
acgaaacggctgcagctgccggtctgggagtacagagagagcttcactgacatcctgatg
cagaaccagtgtttcgtgctggtgggagagactggctcggggaaaaccacgcagatccct
cagtggtgcgtagagatgatgcgttcgctgccagggccgaagagggcggtggcctgcacc
cagcccaggagggtggcagcgatgagcgtggcccagagggtggcagacgagatggatgtc
acgctgggccaagaggtgggctactccatccggtttgaggactgcagctccgccaagacc
gtgcttaagtacatgaccgacggaatgctgctgcgggaggccatgaacgaccccctgctg
gagcgctacggcgtcatcatcctggacgaggcccacgagcgcaccttagcgacagacatc
ctcatgggggtcctcaaggaagtcgtccgccagagacctgaccttaaggtcatcgtcatg
agcgcgacgctcgacgccggcaagttccaagtgtatttcgacaagtgcccgctgctgacc
atccccgggcgcacgcaccccgtggagatcttctacacgccggagccagagcgggactac
ctggaggctgccatccgcaccgtcatccagatccacatgtgtgaggcgggcgaaggcgac
cttctgctcttcctcacgggacaagaggaaatcgacgaagcctgcaagcgcatcaggcgg
gaggtggacgacctggggccccaagtcggcgacatgaagatcataccgctgtactccacg
ctgcccccccagcagcagcagaggatcttcgagccgcccccacccaacagaccgaatggt
ggcgtcggaaggaaggtcgtcgtgtcaacaaacatcgccgagacgtccctgaccatcgac
ggagtggtgtttgtaattgatcccggatttgccaagcaaaaggtgtataatccacgcatc
agagtggaatcccttttggtcacggccatcagcaaggcctcggctcagcagagggccggc
cgagctggacgaacgtgcccggggaagtgtttccgcctttacacggagaaagcttacaag
acggagatgcaggacaacacatatccagagatcctgaggtctaatcttggctccgtcgtg
ctgcagctgaagaaactgggcattgatgacctggtgcactttgacttcatggacccacca
gccccggagaccctgatgcgagccctcgagctgctgaactacctggcagcgctgaacgac
aacggcgacctgaccgagctgggctccatgatggcggagttccccctggacccgcagctc
gccaagatggtcatcgccagctgcgatttcaactgctccaacgaggtcctctccatcact
gccatgttgtcagtcccgcagtgcttcgtccgtcccacggaggccaagaaggcggccgac
gaggccaagatgcgcttctcccacgtcgacggagaccacctcacgctgctcaacgtgtat
cacgcctttaagcagaaccacgagtccacgcagtggtgctacgacaactttgtcaactac
cgctcgctgatgtctgcggacaacgttcggcagcagctgtcgaggatcatggaccggttc
gacctgccgaggagcagcgtagacttcagcagccgggactattacctgaacatccggcga
gcgctggtcaccggcttcttcatgcaggtcgctcacctggagcgcaccggccactacctg
accgtgaaggacaaccaggtggtccagctgcacccctccaccgtgctggaccacaaaccc
gagtgggtgctctacaacgagtttgtgctcaccaccaagaactacatccgaacgtgcacg
gacgtcaagccggagtggctggtgaaaattgccccgcagtactacgagatgagtaacttc
ccccagtgcgaggcaaagagacagttggagcgtattattgcaaaactctcgtccaaggaa
ggcactccgtactga
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