Kryptolebias marmoratus (mangrove rivulus): 108234870
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Entry
108234870 CDS
T05608
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr02010
ABC transporters
kmr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108234870
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108234870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108234870
Transporters [BR:
kmr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108234870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
108234870
NCBI-ProteinID:
XP_017269942
LinkDB
All DBs
Position
LG7:9065901..9281716
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AA seq
2247 aa
AA seq
DB search
MGLLTQFSLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVSVRSTNKPIYKGQCHYPNKA
LPSAGVLPWLQGLMCNVDNPCLNHPTPGETPGQVNNFNSSIIAGLLIELQTSVVDESLLS
RARLLVDDVNRWSSVLSRSNPGTVTMRSILKDNETFTTYLTQDLSVPPRVVQSLMSTQIQ
LNPMMGIPSPGNVRSILCEGRNLDDYVQFSSRAEREAFQNVSCSLTQQQLINAQQVFLQN
LDGRRVLSGLPSALDLNATDTMALMTTTAANALPILEEVVRLQNSAVFKAAGALDFQDDV
LGSINVLLCGKKPGNSSASASFSLPSLGRTENNGSGSNGGNSSSDFCQALVDTLESTPGL
RYVWSTFRPLLRGKVLYAPDTPAARLLVKEANGTFTSLATLKELADSWDELRPRVWDFLQ
DGSQVNALRALLANPVFAEALDQRLSGTGWTAELLGNFLYNGPPEDRPAGMPPYDWRDAY
NATTEALKLLSKFLGCLDLNKFEAVESEVHLVNKALEHLNNDTFWAGVVFENLPLNSSRI
PPYVRYRIRMDIDEVELTNRVKSRSWSPGARDSAFNDLRYIWGGFAYLQDMMDHAVIRLQ
TSKARPLGVFVQQIPYPCFVDDVFIQSIGTMLPMFLVLAFMYSVCMTIKSLVLEKELRLK
EVLRAVGVRNGALWAARFTENVALLAVPGALITVMVKYGKVLQYSDPSVIFVFLLVFCLA
TISQCFFISVFFSKANLAAACGGLIYFLLYLPHVLCYAWRDVMGFGAKVAASLLSCVAFG
YGAEKLAKYEEQGIGIQWHNVGQSPEEGDRYSFVVSIIMMLLDALLYWVLTWYIENVFPG
QYGIPKPWYFPFTSSYWCGTASATERNPDPLLDSSVSDEYMEKPPPDVKAGVSIRNLVKI
YKTGRKLAVDGLSLDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTAVINGYDIRTD
MDIIRKCLGMCPQHNVLFNELTVEEHVYFYARLKGRSSSEVESEMDQMIADVGLPHKRKE
LAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILST
HHMDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRDGTGMMSNQRQNVIRR
HAKEEQKETDCPSRSSPDDGIGSQTWDNSDPTDLTAVTQLVRRHVPEAVFLESIGQEITF
ILPYGGARDGTFAALFQNLDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPAAKE
PMVRDWKRSSRESKRNSIASVHSKTEHLNGMTDLKERFSSKVEDCKKSASVNGRGSVVIT
GWKLIRRQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFADYPSLELQ
PWMYGLPQTTFYSNDMPDNLEVSKVVETLVDNPGFGTRCMDGDPIPKLPCCSGGSDWVTP
PVDQSVLDIFLDGNWSMSDPSPSCQCSTPRRTIMLPDCPPGAGGLPPPQRIQNTTDTLLN
LTGRNMTDFLVKTFEHSGKKRYGGISVGAVNSQVRLTEAQIEGVFRDLRDLFNSSQDNVT
DQTFQRAETLLKKLGTRDNVKVWFYNQAWHSMVSFLSVANNGILRGNLPAGQRPRQYGIS
VSNHPLNLTKEQLSFVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFV
SGVNPAVYWLANFAWDMCNYIVPCFIVIVIFLSFQQKAYVSPPNLPALILLLILYGWAIT
PMMYPASFLFSVPSTAYVVLTCVNLFIGINGSVATFIMELLDDDNVAHINDIVKQVLLIF
PHFCLGRGLIDMASNQAIATLFSSLGEDRFKDPLSWEMVGKNLCAMSVQGIVMFALTILI
QYKFFCKPRLISVKLPSAEEEDADVARERRRVYEGKAQKELLMIYDLTKVYPQKSTPAVD
RLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRYVHQNMGY
CPQFDAINDLLTGREHLEFYGRLRGVPEEEIAMVAEWGIQKLGLVKYANKSAGTYSGGNK
RKLSTAIALIGCPPLIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEAL
CTRMAIMVNGCFKCLGSIQHLKNRFGDGYTVIVRVAGSPPELKPVEDFIQRTFPGSVLKE
SHHNTLQYQLPHAPGALANIFGHFTGHQQRLGLEDYSVSQTTLDQVFVNFAKHQHDEDNS
RAYSNPVDISDELPLKAVQTSNEAKKV
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttctcgctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgtcgagctgctgtggcctctgtttctcttcttcatcctggtg
tcggtgaggtccaccaacaagcccatttacaaagggcaatgtcactacccaaacaaagcg
ctgccgtctgccggcgtgctgccctggctccaagggctgatgtgtaacgtggacaacccc
tgtctgaaccatccaacgccgggggagacaccaggccaagtcaacaacttcaacagctcc
ataatcgctgggctcttgatcgagctgcagaccagtgtggtcgacgagtcccttctcagt
cgggcccggctgctggtggacgacgtcaaccggtggtcctctgtcctgtccaggtctaac
cctgggaccgtcaccatgaggagcatcctgaaagacaatgaaactttcaccacgtatctg
actcaggatttatcggttccaccaagggtggtccagagcctcatgagcactcagattcag
ctcaatccaatgatgggcatcccgagcccaggcaatgtgaggagcatcctgtgcgagggg
aggaatctggatgactacgtccaatttagcagccgagccgagagggaggcttttcaaaat
gtcagctgctccctcactcaacagcagctgattaacgcccagcaagtcttcctgcagaac
ctggacgggaggagagtgctttccgggctaccttcagctttggacctgaatgcaacggac
acaatggcgctgatgacgacaaccgcagccaacgcgttaccaatacttgaggaggtggtc
cggctgcagaactcggcggtctttaaggcggccggcgctctggatttccaagacgacgtg
ctgggaagcatcaacgtgctcctgtgtgggaagaagcccggcaacagttccgccagcgcg
tccttcagcctgccctcgctcgggcggacggagaacaacgggtcggggtcgaacgggggc
aacagttccagtgatttttgtcaggctctcgtcgacaccctggagagcacacctggcctg
cgctacgtttggagcaccttcaggccgttgctgcgagggaaggtgctgtacgcacctgac
acacctgccgctcgcctgctggtgaaagaagcgaacggcacgttcacctccctggccacg
ctgaaggagctcgccgactcgtgggacgaactcaggccgcgtgtctgggacttcctgcag
gacggcagtcaagtcaacgcgctcagggctttgctggcgaaccccgtcttcgccgaggcc
ctcgaccagcgtctgagcggcaccgggtggacggccgagctgctggggaacttcctgtac
aacgggcctcccgaagaccgcccggccgggatgccgccgtacgactggagagacgcctac
aacgccaccacggaggccttgaagctcctctccaaattcctcggctgtttggatctgaat
aagttcgaggcagtcgagtctgaagtccatctcgtgaacaaagccttggagcatctgaac
aacgacacgttctgggccggcgtggtctttgaaaacctgccgctgaactccagccgcatc
cctccgtacgtcaggtacagaatccggatggacatcgacgaggtggagctcaccaaccgg
gtgaaatccaggtcatggtctcccggagccagagacagcgcctttaatgatctgcgctac
atatggggcggcttcgcttatctgcaggacatgatggaccacgccgttatacgcttgcag
acatcaaaggctcgccctcttggtgtttttgttcagcaaatcccatatccttgctttgtg
gatgatgtcttcatacagagcatcggcaccatgctccccatgttcctggtcctggccttc
atgtactccgtgtgcatgaccatcaagagcctggtgctggagaaggagctgcggctcaag
gaggtgctgcgggccgtcggcgtccgcaacggcgccctgtgggccgccaggttcacggag
aacgtcgctctgctcgccgtccccggtgcgctcataactgtcatggttaagtacggcaaa
gtgctccagtacagcgacccctcggtaatcttcgtcttcctgctggtgttctgcctggcc
accatctctcagtgcttcttcattagcgtcttcttctccaaggccaacctcgcagcggcg
tgtggcggcctcatctactttctcctctacctgccgcacgtcctctgctacgcctggagg
gacgtcatgggtttcggggccaaggtcgccgcgagtttgctgtcgtgcgtggccttcggc
tacggcgccgagaagctcgccaagtacgaggagcaaggcatcgggattcagtggcacaac
gtcggccagagtcccgaagagggggatcgctacagcttcgtcgtctccatcatcatgatg
ctcctcgatgccctcctgtactgggtgctcacgtggtacattgaaaatgtcttcccaggt
caatatggaattcccaaaccgtggtacttccctttcacttcctcgtattggtgtgggacg
gcgtccgcgaccgaacgtaaccccgatccgctgctggactccagcgtcagcgacgaatac
atggagaagccgcctcccgatgtaaaagccggggtctcgattcgcaacctcgttaaaatc
tacaagaccgggaggaagctggcggtggacggactcagcctggacttctacgagaatcag
atcacatcgtttctcggccacaacggcgcagggaaaacgaccacgatgtccatcctgacg
ggactgttcccgcctacgtcgggaacagccgtcatcaacggctatgacattcgaaccgac
atggacatcatccggaagtgcttgggaatgtgtccccagcacaatgtcctgtttaacgaa
ttaactgtagaggaacacgtttacttctacgcccggctgaaaggacgcagcagcagcgag
gtcgagtccgagatggaccagatgatcgcagacgtcggtttgccccacaagcggaaggaa
ctcgccaagaacctgtcgggtggcatgcagcgaaagctgtccgtggcgatcgccttcgtg
ggcggctccaaaatcgtcatcctggacgagcccacggcgggagtcgatccctacgctcgc
aggggcatctgggagctgctgctgaagtacaaacaaggtcgcaccatcattttgtcaacg
caccacatggacgaggccgacattttaggagatcgcattgccatcatctcccacggcaag
atgcgttgctgcggctcctcgctcttcctgaagaagtgttttggcagcggctactacctg
accctggtcagagacgggaccggaatgatgtccaaccagcggcaaaacgtcatccggagg
cacgccaaggaagagcaaaaggagacggactgtccttccaggagcagtccagatgatggc
attggcagtcaaacctgggacaactccgatccgacagatttgacagctgtgactcagctc
gtgcggcgccacgtccccgaggccgtctttttggagagcatcggtcaggaaatcacattc
atactgccctacggcggagccagggatgggacgttcgccgcgctcttccaaaacctcgac
ctggcgatggctgaccttggtctgaccagctacggtatctctgacaccacgctggaggag
atatttcttaaagtggcagaggacactggagtggatgcagaaataccagcagcaaaggag
ccgatggtgagggactggaagagaagctcccgcgaatcgaagagaaacagcatcgccagt
gtccacagtaaaactgagcacctcaatgggatgactgatttaaaggaaaggttttccagt
aaagtagaagattgtaagaaaagcgccagcgtcaatggaagagggtccgtggtcatcacc
gggtggaagctgatcagaaggcagttcctggcgctctttatcaagcgcttccaccacgcc
cgaaggagccgcaagggactcattgcccaggtggtcctgccggctttctttgtgtgcctg
tctctgatcttctccctcatcgtcccgccgttcgccgactacccgagcctggagctgcag
ccgtggatgtacggcctgcctcaaaccaccttttacagcaacgacatgccagataacctg
gaggtgtccaaggtggtggaaacgctggtggacaaccccggttttgggacacgctgcatg
gatggagatccgataccgaagttgccgtgctgctccggcgggtctgactgggtcacgccg
cccgtggatcagtcggtcctggacatcttcctcgacgggaactggagcatgtccgacccg
tccccttcctgccagtgcagcactccgagacggaccatcatgctgcccgactgtccgccc
ggggcaggaggccttcctccaccacagaggattcagaacacgacggacaccctgctgaat
ttgactggacgaaacatgacagacttcctggtcaagacttttgagcactccggtaaaaaa
aggtacggagggatctctgtcggagcagtcaactcacaagtccgactgaccgaggcgcag
atcgaaggagtgttcagggatttaagagacctcttcaattcctctcaggataacgttact
gatcagacgttccagagggctgagacgctgctgaagaagctgggaaccagggacaatgtc
aaggtgtggttctacaaccaggcgtggcacagcatggtgtctttcctaagtgtggccaac
aacggcatcctgaggggtaatttgcccgcgggacagagaccccggcagtacggcatctcg
gtttccaatcaccccttaaacctcaccaaggaacagctctcctttgtggccatggccacg
acctcgactgacgtggtggtgtccatctgcgttatttttgccatgtccttcatccccgcc
agctttgtcctctttctcatccaagagagggtgagcaaagccaagcatctgcaatttgtc
agcggagtcaacccggccgtctactggttggccaactttgcctgggacatgtgcaactac
atcgtcccctgcttcattgtgatcgtgatcttcctctccttccaacaaaaagcctacgtc
tcgcctcctaacctgcccgccttgattctgctgcttattttgtacgggtgggccatcacg
cccatgatgtatcccgcctccttcctcttcagtgtgcccagcacggcctacgtggtgctg
acctgcgtcaacctcttcatcggcatcaacggcagcgtggccactttcatcatggagctc
cttgatgacgacaatgtcgctcacatcaacgacatcgtgaagcaggtgctgctgatattc
ccacatttctgtctgggcagagggttgattgacatggcctcaaaccaggcgattgcaacg
ctcttcagcagtcttggggaagaccgttttaaggacccactgagctgggaaatggtggga
aaaaacctctgcgccatgtccgtccagggaattgtgatgttcgcccttacaattctcatc
cagtacaagttcttctgcaaaccaagacttatttccgtaaagctgccatctgcggaggaa
gaggacgccgatgtcgcacgggaacgcaggcgcgtgtacgaaggcaaagctcagaaggaa
ctgctaatgatctatgacctgactaaggtataccctcagaagagcacccctgctgtggac
aggctatgtgtgggcgtacctgctgcagagtgttttggtttgctgggcatcaacggagct
gggaaaaccactacgttcaagatgctgacgggagacatcccagtctccagcggagaggcc
ttcctaaacggctacagcatacggacagaaatgaggtatgttcaccagaacatgggctac
tgtccacagtttgatgccatcaacgacctcctgacgggacgagagcacctggagttttat
ggcaggctaagaggggtaccagaagaagagattgccatggtggctgagtgggggattcag
aagttggggctggtcaagtatgccaataagtcggcaggaacgtacagcggcgggaacaaa
cgcaaactctccacagcgatagctctgattgggtgtccccccttgattttcctggacgag
cccaccaccgggatggaccccaaagcgcggcgcttcctgtgggactgcatcctgagcgtc
atcaaagagggacgctcggtcattctcacgtcccacagtatggaggagtgtgaggcactg
tgcacgcgcatggccatcatggttaacggctgcttcaagtgcctcgggagcatccagcac
ctgaaaaacagatttggtgacggatacacggtgatcgtgcgggtcgccggttctcctccc
gaactcaagcctgtcgaggacttcatccagcggacgtttccgggcagcgtcctcaaggag
agtcaccacaacacactccagtaccagcttccgcacgcgccaggagctctggccaacatc
ttcggccacttcaccggccaccagcagaggctgggcttggaggactactctgtgtcccag
actactctggatcaggttttcgtgaattttgcgaagcaccagcacgatgaggacaactct
cgggcctacagcaacccggtggacatttcagacgagctgccactcaaggcagtgcagacc
tccaacgaagcaaagaaggtttaa
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integrated database retrieval system
