Kryptolebias marmoratus (mangrove rivulus): 108234949
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Entry
108234949 CDS
T05608
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108234949 (trmt2a)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108234949 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
Methyltransf_11
Methyltransf_4
Methyltransf_15
RRM_1
Ubie_methyltran
Cons_hypoth95
PrmA
Methyltransf_32
Methyltransf_23
TRM5-TYW2_MTfase
RRM_PARP14_3
N6_N4_Mtase
Methyltransf_12
UPF0020
RrnaAD
CMAS
AviRa
Methyltransf_18
TPMT
Slo-like_RCK
Motif
Other DBs
NCBI-GeneID:
108234949
NCBI-ProteinID:
XP_017270062
UniProt:
A0A3Q3A791
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All DBs
Position
LG1:complement(9655439..9664889)
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AA seq
613 aa
AA seq
DB search
MADVSSNPASDAAPSKEEEEVDLPRDSKADTPEAAVQAAGNSEAAPDPCKYRYIKNDLFT
SEIFKVEIRNLPKFVGFNDLKKFLAKHGLNPHKIKLLGKQPFAFVTFKNEEERDKAMKMV
HGMPWKGQVLSVRLAKPKADPILRKRQREEGAGAAGQPASKRTEGGEEEEEEEEEPLSVQ
LANVVTPLWNVPYEEQLRRKEQEVVAILQRLAKEIGGTNKAMLPWLFAQKGKFNKMCCPL
EAIRPSPTQTEYRNKCEFLISVGADGEDKTVGFRLGKYKGGSCAVVGPAETCHVSAEAKT
VVREFQNFIRTTPYSVYSPETYEGHWKQLTVRTTRTKQAMAIVFFNPQKLEEEELTALKS
SMRTYFVEGEGKESGVTALYFVRDGQRKSPNLEDLPCELVAGESCIHEELLGLKFRISPH
SFFQVNTGAAEVLYSAVGEWAQLDQDSTVLDVCCGTGTIGISLANRVKKVIGIEMCQEAV
EDARVNAKLNGLSNVEFHCGKAEDVFPNILNAVVSPSVTAIVDPPRAGLHSKVILAIRRA
EHLKRLVYVACNAKAAMNNFIDLCRAPSNRVHGAPFRPVRAMAVDLFPQTMHVEMLLLLE
RVDYNSQKQQQTQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttagtagcaatccagcatctgatgcagcgccctcaaaggaggaagaggag
gttgatctcccgcgagactccaaagccgacactcctgaggctgctgtgcaagctgcgggc
aacagtgaggcagctcccgacccctgcaagtaccgctacatcaagaatgacctcttcacc
tcggaaatcttcaaggtcgagatcaggaacctccccaagttcgtcggcttcaacgaccta
aagaagttcctggccaagcacgggctcaacccgcacaagatcaagctgttgggcaagcag
ccgtttgcctttgtcacttttaagaacgaggaggagcgcgacaaggccatgaagatggtt
cacggcatgccgtggaagggccaggtgctcagcgtcaggctggccaaaccgaaagcggac
cccatcctgaggaagaggcagcgggaggagggcgcgggagcggccgggcagccggcttcc
aagagaaccgaaggcggcgaggaggaggaggaggaagaggaggagccgctcagtgttcag
ctcgccaacgtggtgactcctctgtggaatgtgccttacgaggagcagctgaggaggaag
gagcaggaggtggtggcgattctgcagaggttggccaaagagattggcggcaccaacaaa
gccatgttaccgtggttatttgcacagaaaggaaaattcaacaaaatgtgttgtcctctt
gaagctatccgaccgtctcccacgcagacagagtacaggaacaagtgcgagttcctcatc
tctgtgggggcagacggcgaggacaagaccgttggctttcgcttggggaaatataaagga
ggctcctgtgctgtggtggggccagcggagacctgccatgtctcagcagaggccaaaaca
gtggtccgcgaatttcagaacttcatcaggacaacaccgtactctgtgtacagtcctgag
acatatgaaggccactggaagcagctgactgtacgcaccacgaggaccaaacaagctatg
gctattgttttcttcaacccacagaaacttgaagaggaggagctcactgctctgaagagc
tccatgaggacttacttcgtcgagggagagggcaaggagagcggcgtgaccgctttatac
tttgttcgagacggtcagaggaaatctcccaacctggaggatctgccctgtgagctggta
gccggggagagctgcattcacgaggagctgctcggcctgaagttcaggatttctcctcac
tccttcttccaggtgaacacaggagctgcagaggtgctgtactcggctgtgggggagtgg
gcccagctcgatcaggacagcacggtgctggatgtgtgctgcgggacaggaaccatcggc
atctccctggctaacagagtaaaaaaggtgattgggattgagatgtgccaggaggcagtg
gaagacgccagagttaatgcaaagctcaacggtctgagtaatgttgagttccactgtggg
aaagcagaggacgtcttccccaacatcctcaacgctgtcgtctcacccagcgtcaccgcc
atcgtggacccgccaagagcaggcctgcattccaaagtgatcctcgccatcaggagagcc
gaacacctgaagaggctcgtttacgtcgcgtgcaacgccaaggcagccatgaacaacttc
atcgacctgtgcagagctccttccaacagagtccacggagccccgttccgtccagtgcga
gcgatggccgtggatttgttccctcagacgatgcacgttgaaatgctgctgttgcttgag
agggtggactacaactcccagaagcagcagcagactcagtga
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