Kryptolebias marmoratus (mangrove rivulus): 108235005
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Entry
108235005 CDS
T05608
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108235005
03041 Spliceosome [BR:
kmr03041
]
108235005
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108235005
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108235005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
108235005
NCBI-ProteinID:
XP_017270190
UniProt:
A0A3Q3FC96
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Position
LG1:7956085..7965969
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AA seq
386 aa
AA seq
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MDDEQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMINDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKT
TYESNSKHLSFDEVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWGKETPDMMNSMQQMSVPQQNKIGFAAAQ
PYGQWGQWYGNGPQISQYVPNGWQVPTYGVYSQAWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGATGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacagcccagaaccttatacgtgggaaatctgtccagggatgtcaccgag
cctctcattctccaggtcttcacgcagataggaccctgtaaaagctgtaaaatgataaat
gacacggctgggaatgatccatattgctttgtggagttctatgaccacagacatgctgct
gcctccctggctgccatgaatggaaggaaaatattgggtaaggaggtcaaagtcaactgg
gcaacaacaccatccagccagaaaaaagacacaagtaatcactttcatgtctttgttggc
gatctcagtccagaaataaccacagaagatgtcaaagctgcctttgctccatttggcagg
atatcagatgctcgagttgtgaaagatatggctacagggaaatctaaaggctatggcttt
gtgtctttcttcaacaaatgggacgcagagaatgccattcagcacatgggggggcagtgg
ttaggcggcagacagattcgaactaactgggccacaagaaagcctcctgccccgaagacc
acctatgaaagtaactccaagcatctatcgtttgatgaagtaatgagccagtccagcccc
agtaactgcactgtgtattgtggtggagtcagcacaggactcacagagcaactgatgaga
cagaccttctctccctttggacaaatcatggaagtcagagttttcccagacaaaggctat
tcatttgtcaggtttaactcccatgagtcagcagcccatgccattgtgtcagtgaacggc
tcttcaatagagggccacgtagtgaagtgctactggggtaaagaaacaccagacatgatg
aactcgatgcagcagatgtctgttccccagcagaacaagatcggctttgctgcagcccag
ccctatggccagtggggccagtggtatggcaacgggccccagatcagccagtatgtccca
aatgggtggcaggtccccacctatggggtctacagccaggcctggaaccagcagggcttt
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggtt
atggagcctacacagggattgaatgggagtatgctagccaaccagcccggtatgggagct
acaggataccccacacactga
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