Kryptolebias marmoratus (mangrove rivulus): 108235024
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Entry
108235024 CDS
T05608
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108235024 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108235024 (cnga1a)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108235024 (cnga1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
108235024
NCBI-ProteinID:
XP_024861426
LinkDB
All DBs
Position
LG3:complement(11000568..11008263)
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AA seq
706 aa
AA seq
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MTMSTSLPRLTVTAHTAAELTTHSEEQSEDDLAPQSNLLANMNNSNNNEEEKKRKKKKEK
KEKKEKNVKKKKEENEAKDKEKEKEKEKKKEKEKEKEKEKEKEKDKDKEKPKELFVINPA
GNLYYNWLFIITLPVMYNWTMIIARACFEELQHDYIIYWVFLDYSSDLIYLADMFFRTRT
GYLEQGLLVKDEKLLRDNYVNSRQFHLDVVSMLPTDVFYFILGLDYPEIRINKLLRIGRM
MEFFTRTETKTNYPNIFRIANLIMYILIIIHWNACLYFSFSKYIGFGADEWVYPALDDPE
EPEFGKPMRKYAFSLYWSTLTLTTIGETPPPALDSEFLFHVVDFLVGVLIFATIVGNIAT
MISNMNAAQAQFQARIDNIKQYMQVRKVSKELELRVIKWFDYLWNNGKAQDEREVLRYLP
DKLKAEIGIQVHMDTLKKVRIFADCEAGLLIQLVLKLKPQVFSPGDYICKKGDIGREMYI
IKDGKLAVVADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSK
DDLMESLTEYPDAKAILEEKGRQILMKDGLIDLDPANIKPEAKELAEKVNKLYSTMELMQ
IKLKKILGNYKSSGKALKQRIIQLERLSGEDVEDEDEEEEKAKKEAKVEGEKKEGEKAEG
DGEEKKEEGKGEDTEKKDEEQEEAKADEVKDEDKKEEKKADEKKKK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtctaccagccttccccgcctcaccgtgacagctcacacagcagctgaacta
acaacacacagcgaagagcaaagtgaggatgacctggcacctcaatcaaatcttctggcc
aacatgaataacagcaataacaatgaagaggaaaaaaagagaaaaaagaaaaaagagaag
aaagagaaaaaggagaagaacgtaaaaaagaagaaggaagaaaatgaagcaaaagacaaa
gaaaaggagaaagaaaaagagaaaaaaaaagagaaggaaaaagagaaggaaaaggagaaa
gaaaaggaaaaggataaggacaaagaaaagcccaaagagctatttgtcattaatcctgcc
gggaatttgtattacaactggcttttcatcatcactttacctgtcatgtataattggact
atgatcatagccagggcgtgctttgaagagctacagcacgattacataatctactgggtt
tttttggactacagctcggaccttatctacctggctgatatgttcttcaggactagaacg
ggttatcttgaacaaggcctgttagtgaaagacgagaagttgctccgggataactacgtc
aacagtcgccagtttcatctcgacgttgtctccatgctgccaacggatgttttctatttt
atcctgggcctcgactatccagagatccgcatcaacaagctgctgagaatcggccggatg
atggagttcttcactcggacagagactaaaaccaactacccaaacatctttcgcattgca
aacctaattatgtacatcctaattatcatccactggaacgcctgcctgtacttttcgttt
tctaaatatattggttttggtgcagatgaatgggtctacccggctctggacgatcctgag
gaaccagaatttgggaagccaatgaggaagtacgctttcagtctctactggtccacactg
accctgaccaccattggagaaaccccaccgccagctcttgactctgaatttctcttccac
gtagtggacttcttagttggagtcctgatctttgccaccattgtaggaaacattgccacc
atgatttccaatatgaacgctgcccaagctcagttccaggcccgcattgacaacattaag
cagtacatgcaggttcgaaaggtcagcaaggagcttgagttgcgagtcatcaagtggttt
gactacttgtggaataacggtaaagctcaggatgagagagaggtgctgaggtatctcccc
gacaagctgaaagcagaaataggcatccaggtccatatggacaccttgaagaaagtccgg
atctttgcagactgtgaggcaggccttctgatccagctcgtcctgaaactaaaaccacag
gtattcagccctggagactacatctgcaagaagggcgacattggccgagagatgtacata
ataaaagacggcaaactcgctgttgttgctgatgatggtgtcacacagtttgttgtgttg
ggaagcgggagctactttggtgaaatcagcatccttaatattaaaggcagcaaagcaggc
aacaggaggacagccaacattcgcagcatcggatactctgaccttttctgtctgtcaaaa
gatgatttaatggaatcgttgactgagtatccagatgctaaagccattctggaggagaag
ggccgtcagatcctcatgaaagatggtttaatagatttggatcctgccaacatcaagcct
gaggctaaagaactggcggagaaggtaaataagttgtacagtacaatggagctgatgcag
attaaacttaagaagattttgggaaattacaagagctctggcaaagctctgaaacagcga
atcatccaattggagcgcctgagcggagaggacgtagaagatgaagacgaggaggaagag
aaagcaaaaaaagaagcaaaagttgaaggagagaaaaaagaaggtgaaaaggctgaagga
gatggagaggaaaagaaggaagaaggaaagggtgaggacactgagaaaaaagatgaagag
caggaagaagcaaaagctgatgaagtaaaagatgaagataaaaaagaggagaaaaaggca
gatgagaaaaagaaaaaataa
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