Kryptolebias marmoratus (mangrove rivulus): 108235028
Help
Entry
108235028 CDS
T05608
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108235028 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
kmr04030
]
108235028 (smo)
G protein-coupled receptors [BR:
kmr04030
]
Frizzled / Smoothened family
108235028 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
DUF6312
Motif
Other DBs
NCBI-GeneID:
108235028
NCBI-ProteinID:
XP_017270222
UniProt:
A0A3Q3B7V2
LinkDB
All DBs
Position
LG18:complement(12322716..12330125)
Genome browser
AA seq
818 aa
AA seq
DB search
MSSWGPGPFVGLCGMLWVWAAWLSGCGALLAPNGTLFEDICKQSTTCEALKYNTCLGSPL
PYTHTSLVLAEDSSTQEEAFEKLTMWSGLRNAPKCWSVIQPLLCAVYMPKCENGRVEVPS
KSLCLATRKPCSIVDRERGWPNFLKCDKFPTGCSNEVTKLKFNTSGQCEAPLVKTDIQSS
WYKDVEGCGIQCDNPLFTEEEHNDMHAYIAYFGTITLLCTFFTLATFLADWKNSNRYPAV
ILFYINACFFVGSIGWLAQFLDGARDEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYSL
MSGVIWFVMLTYAWHTSFKALGTTHQPLSGRTSYFHMVTWSVPFVLTVAILAIAEVDGDS
VSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKI
NETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFRDYVLCEANVTIASQTNKPIP
ECTIKNRPSLMVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKIIGRSDNEPKRIKK
SKMIAKAFALRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNEPSNDMSSAWAQHVTKM
VARRGAILPEDISVTPTGTPVPPPEERNRLWMVEAEISPEMIKRKKKKKKKRKDVRPVEE
VADHQTRHQREFGRSSVPRLPKLPCHPSLVANLRLHQRQQQKMEEDVLPGLCPEFQPCEE
RCPYLECQSSYGNKLLSNPLTHVDCPEDLGLRPRCHPSTSSWQPRGSSLYPREKDLNGLS
ERMAHVARVPAGRKAGCGPIHSRTNLMEAELMDADSDF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctggggtccgggtccctttgttggactttgcgggatgctctgggtctgggcc
gcctggctgtcgggctgcggggccctgttggcccccaacgggaccctgttcgaggacatc
tgcaagcaaagcacgacctgcgaggctctgaagtacaacacatgcctgggctcacctctg
ccctacacacacacctctctggtcctggctgaggactccagcacccaggaggaggctttt
gagaagctgaccatgtggtctggtttgcggaacgctcccaaatgttggtcggtcatccag
ccgttgctctgcgccgtctacatgcccaaatgtgagaacggccgagtcgaggtgcccagc
aagagcttgtgtttggcaacgcggaaaccctgcagcatcgtggaccgggagagaggctgg
cccaacttcctcaaatgtgacaaattccccacgggctgttcgaatgaggtgacgaagctg
aagttcaacacgtcgggtcagtgtgaagctccgctggtgaaaacggacattcagtccagt
tggtacaaagatgtggagggctgcgggatccagtgcgacaaccccttattcaccgaagag
gagcacaatgacatgcacgcctacatcgcttactttggcaccatcacactgctctgcacc
ttcttcacgctggccacatttcttgccgactggaaaaactccaaccgctacccggctgtc
attctcttctacatcaatgcttgtttctttgtgggcagcatcggctggctggcccagttc
ctggacggagcacgcgatgagatcgtgtgcaagagcgacaacaccatgcggcttggcgag
ccctcatcctcagaaactctgtcgtgcgtcacaatctttattatcgtctattactccctg
atgtcgggcgtgatttggtttgttatgctgacttacgcctggcacacatccttcaaagct
cttggcacgactcaccagcccctctcgggtcggacctcgtacttccacatggtcacctgg
tccgtccccttcgtcctcactgtggccatcctcgctattgctgaggtggacggggactcg
gtgagcgggatctgttttgtcggctataagaactaccggtaccgggctgggtttgtgttg
gcacctattggagtggtgcttgttgtcggcggctacttcctcatccggggtgtcatgacc
ttgttttccatcaagagtaaccacccaggcctgctgagtgagaaagccgccagcaaaatc
aacgagacgatgctgagactcggtatatttggattccttgcatttgggtttgttttcatc
acattcggctgccacttttatgacttcttcaatcaggccgaatgggagaggagcttcagg
gattatgtgctgtgcgaagccaacgtgactatcgcatctcagaccaacaagcccatcccg
gaatgcaccattaagaaccgtcccagcctgatggtggagaagattaacctgttctccatg
tttgggacgggaatcgccatgagcacctgggtctggaccaaagccaccatcctcatctgg
aaacgcacttggtgcaagatcattggccgcagcgacaatgagcccaagaggataaagaag
agcaagatgattgccaaggcgtttgctttgagaaaggagctccacaaggacccggagaag
gagctgtccttcagcatgcacactgtgtctcatgacggcccagtggctggaatcaatttt
gacctcaacgagccatccaatgatatgtcgtcagcgtgggcgcagcatgtgaccaagatg
gttgccagacgaggcgccatcctccctgaagacatttctgtcactcccactggtacacca
gtgccacctccagaggagagaaacaggttgtggatggtggaggcggaaatttctcctgag
atgataaagaggaaaaaaaaaaagaagaaaaaaaggaaggacgtgcgtccggtcgaggag
gtggcggaccaccagactcgtcaccaacgcgagtttggtcgcagctcggtgccccggctg
cccaagcttccctgccacccgagcctggtcgccaacctgcgcttgcatcagaggcagcag
cagaagatggaggaggacgtcctgccggggttgtgcccagagtttcaaccctgtgaggag
aggtgcccctacctggagtgccagagcagctacggcaacaagctgctgtccaaccctctg
acccacgttgactgtcctgaagacctgggcctcagaccacgctgccacccctcaacctcc
agctggcagcccagggggtcttcactctaccccagagagaaggatcttaacgggctgtca
gagagaatggctcatgtggcccgggtaccagcaggccgcaaggctggctgtggaccaatc
cactccaggaccaatttaatggaggcagagctaatggatgctgactcagatttttaa
DBGET
integrated database retrieval system
