Kryptolebias marmoratus (mangrove rivulus): 108235073
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Entry
108235073 CDS
T05608
Symbol
slc6a1l
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1 isoform X1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108235073 (slc6a1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108235073 (slc6a1l)
Transporters [BR:
kmr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108235073 (slc6a1l)
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Motif
Pfam:
SNF
RhodobacterPufX
Motif
Other DBs
NCBI-GeneID:
108235073
NCBI-ProteinID:
XP_017270312
UniProt:
A0A3Q3AYS6
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Position
LG18:11333949..11348823
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AA seq
597 aa
AA seq
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MGKTGQSTVDLNSPSEVKQAVPSEELDPAAPPADETKKKEALPDRGSWKGKFDFLLSCVG
YAIGLGNVWRFPYLCGKNGGGAFLIPYFMTLVFAGIPLFFLETALGQFTSVGGLGVWKLI
PMMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFNSFSSELPWQSCDNYWNTEDCFSNYSL
TDTTNMTSAVTEFWERNMHQLTSGLEEPGELRWPLVGTLALSWILVYFSIWKGVEWTGKV
VYFSATYPYFMLFILFCRGVTLPGAIDGILFYITPDFNKLVRSEVWLDAATQIFFSYGLG
LGSLIALGSYNTYNNDVYKDSVIVCCINSCTSMFAGLVIFSIVGFMSYITKKPVQELAAS
GPGLAFLAYPQAVTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALVDEYPLVLRKR
KKVFILIVCFISFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETISISWFYGAER
FYKNIEDMIGYRPCVWWKLCWLFFTPLICLGVFTFSAIEMTPLTLGKYVYPLWGQVVGWF
MALASMVLIPGYVIYMFCTTKGSIKQRWRRMTTSQEDEKPSESEEFTHTGSMGEAPV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggggaagactgggcagagtacagtggacttgaactccccatcagaggtcaaacaagcc
gtcccctctgaggaactggatcctgcggcaccccctgcggatgaaacaaagaaaaaggag
gctctacctgacaggggaagctggaaggggaagtttgatttcctgctgtcatgtgtggga
tacgccatcgggttaggaaacgtctggaggtttccttatctatgtggcaagaatggtgga
ggtgctttcctgatcccatacttcatgaccctggtgtttgctgggataccgctctttttc
ctggagacagctctgggacagtttacctcagtgggtggactgggggtgtggaaactcatc
cccatgatgaaaggtgttggtctggccgcagtcgtcctctccttttggttaaacatctac
tacatcatcatcatcgcttgggctctctactacttgttcaactccttcagttcggagctt
ccttggcagagctgtgataactactggaacacagaggactgtttctccaactacagcctg
acagacaccaccaacatgaccagtgctgtcactgagttctgggaacgtaacatgcaccag
ctgaccagtggtctggaggagccaggagagctacgctggccgttagtgggcaccctggct
ctgtcatggatccttgtctacttctccatctggaaaggagtggagtggacgggaaaggta
gtttatttctctgccacttatccgtacttcatgctgttcatcctgttttgccgaggggtc
acgcttcccggagccatagacgggatcctcttctacatcactccagacttcaataagctc
gtccgatctgaggtgtggctggacgcagcaactcagatcttcttctcttacgggttgggc
ctgggctcgctcattgcactgggaagctacaacacttacaacaatgatgtctacaaggac
tctgttattgtgtgctgcatcaactcctgcaccagcatgtttgctggattggtcatcttc
tctattgtaggcttcatgtcttacatcacaaagaaacctgtgcaggaactggcagcttca
ggtccaggtttggcctttttagcctatcctcaggcggtcacccagctccccatgtcttct
ctgtgggccatcctgtttttctcgatgctcatgatgctcggcttggacagtcagttttgc
acagtggaaggtttcatcacagccctcgtggatgaatatcccctggtgctgaggaagagg
aagaaggtcttcatcctcattgtttgcttcatctccttcatcattggattctccaatatc
actcagggtggtctgtatgtcttcaagctgtttgattactactctgccagtgggatgtgt
cttctcttcctcgtcttctttgaaacaatttccatatcctggttttatggagctgaaaga
ttttacaagaacattgaggacatgattggctatcggccatgtgtctggtggaagctttgt
tggctgttcttcacacctctgatctgcctgggggtgttcacctttagtgccatcgagatg
acccctctgacccttggaaagtacgtgtacccactttggggccaagtcgtgggatggttt
atggctttggcttcaatggtacttatcccaggctatgtcatctacatgttctgcactacc
aagggcagcatcaaacagcgctggcgaaggatgaccacctcccaggaggatgagaaacca
tcggagtctgaagaattcacacacacaggaagcatgggggaagcgcctgtctag
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