Kryptolebias marmoratus (mangrove rivulus): 108235080
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Entry
108235080 CDS
T05608
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108235080 (pwp1)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
Other 90S particles
108235080 (pwp1)
Pre-60S particles
Other pre-60S particles
108235080 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_RFWD3
EIF3I
WD_LRWD1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
BNIP3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
108235080
NCBI-ProteinID:
XP_017270321
UniProt:
A0A3Q3B2U7
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All DBs
Position
LG18:complement(13362639..13367691)
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AA seq
494 aa
AA seq
DB search
MSSQITCVGWVKRGVAKETPDKVELSQEELQRIITEAKEELGEAADEDGEEDDEGMPPEH
NPSSESADVDSTPKDENDEGEEDEEDELAEYGLDKYDEEDAVTSNLGDSLAGLTVFSSNE
EDPYITIKDTDRYEREDFQIKPTDNFILAGKTEKDCCSLEVYIYNSEEDSLYVHHDILLP
AYPLCVEWLNFDPNPEEGAANYVAVGNMTPQIDVWDLDVVDCLEPVFSLGSKKASKKKKK
SKKGATAEPVEGHTDAVLDLSWNKLVRNVLASGSADDTVILWDLSQCKPATTLRRHTDKV
QTLTFHPFEAQTLISGSYDKTAVLYDCRSPDSSYRTWRFSGQVERVIWNHFSPCNFLAST
EDGFVYCLDARSDKPVFTLRAHDEEVSGLDLSSQIKGCLVTSSADKHVKIWDILGNKPNL
VHSRDMKMGVLFCASCCPDLPFVYAFGGQKDGLRVWDISDVAAVTEVFGSRERLAVNAEP
QDSSSAATANMEVS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccagatcacttgcgtcgggtgggtgaaacgtggcgttgccaaggaaacgcca
gacaaggttgagttgagccaagaggagcttcagcgcatcattactgaggcaaaagaagag
ctgggagaagcagctgatgaggatggagaagaggatgatgagggtatgcctcctgagcac
aatcctagcagtgaatcagctgatgttgactccactccgaaggatgagaatgatgaagga
gaggaggacgaagaggacgagctggcggagtatggcctggataaatacgatgaagaagat
gcagtgactagtaatcttggtgacagtctggctgggctcaccgtgttcagctcgaatgag
gaggatccctacatcaccatcaaagacacagatcgatatgagcgagaagacttccagatc
aaacccaccgacaactttattctggcaggaaaaacagagaaagactgctgcagtttagaa
gtttacatttacaactctgaggaagactctctgtatgttcatcatgatattttgctgcca
gcttatccactgtgtgtagagtggctaaactttgaccccaaccctgaagaaggagcagct
aactacgtcgccgtgggcaacatgactcctcagatcgacgtgtgggatctggatgtggtg
gactgtttagagccggtcttctccctggggagcaaaaaggcctccaagaagaaaaagaag
agcaagaagggtgcaactgcagagcctgtggagggacacacagacgcagtgctggattta
tcctggaacaagctggtcaggaacgtgttagccagtggatctgcagatgatacagtcatc
ttatgggatctgtctcaatgcaaaccagctacaactctgcgaaggcatacagataaggtt
caaacgctgacattccatccttttgaggcacagactttaatatcaggatcttatgacaag
acagctgttctttacgactgccgtagtccagacagcagctatcggacctggaggtttagc
ggtcaagtggagcgtgtaatttggaaccacttttcaccctgcaacttcctggccagcaca
gaggatggttttgtctactgtctggatgcccgctcagataaaccagtgttcaccctgaga
gcacacgatgaagaagtgtcaggtttggacctcagcagccagattaaaggatgcctcgtc
acctcatcggccgacaaacacgttaagatttgggacattttaggcaacaaacccaacctg
gtgcactctagagatatgaaaatgggggtgctgttttgtgcttcatgttgccccgacctg
ccctttgtctacgcctttggaggacagaaagatggcttgagagtttgggatataagcgat
gttgcagcagtgactgaggtgtttgggagtcgagagcgtttggcagtgaatgcagaacca
caggactctagcagcgcagccacagcgaacatggaagtctcctaa
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