Kryptolebias marmoratus (mangrove rivulus): 108235126
Help
Entry
108235126 CDS
T05608
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108235126 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108235126 (dcp1b)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108235126 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
108235126 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
108235126
NCBI-ProteinID:
XP_017270418
UniProt:
A0A3Q3AT13
LinkDB
All DBs
Position
LG18:12527844..12539483
Genome browser
AA seq
665 aa
AA seq
DB search
MTAMSAASNSCLAAKGLDISLAALQRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQDPFLLYRNARLVIHGIWFYDK
QDCQRIAHRMKILTHQEQIVAQSQGGWLSPGGGGAAGRGRAAAGGGGGGGGGGGRGGGRG
NNEAKAVDIIQMLTKARSEYDKDKTNSEPKEIGGSSVLCGNPNLIKPIPVKPNAQDSEGA
EPKTISLATLFGSQHQHHHASKPHSAPPVAASTSTGKVTRPPVARTLTYDDAVNSGRNVT
SATGNITLAGSSDGGVRPVVGEDGGNVVAALQGPAAAHQPPGQPQHCPAIAKLMQGQRSV
AGVGGVLQTLSESPENRLCDNGVPLEHHHHHLYHHHHRELHPHHHQQQLQPDPIKRLLQT
QPTPQLATSFTSTASPCCSNPPPLQHNPLLPSQPGGVDSVSCPHLQVQQSQQLFFNLTKS
QTEMLNSHQTPCKAQGTGLSSQMQGVVSPHELLHKLQLVQQEQNLTSHDPPRPYPGLAPR
FLGPNQNQDSGSSLVPPPTTGQKAALQFQVISPQRIPATVAPTLLLSPSVFTQTKTGSGL
PAAAQDSCSVPTSLPRPPLQDEVRAPSRSQLQAALLHLIQTDSSFLDSIYEAYVSRFSNG
SSSKY
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgatgtctgcagctagcaatagctgccttgctgcaaaaggactggatataagt
ttggctgccctgcagcgacaagacccttatatcaataatattgtggacgtggccagccaa
gttgccctgtatacttataacaacagagcaaatgagtgggaaaagacagaagtagaaggt
acactttttatctacacaaggttggcatctcccagacatggattcaccatcatgaatcgg
ctcagcatggagaacttgacagagcccatcacaaaagatctggacttccagcttcaggac
ccgttcctgctttaccgcaatgcacgattggttatccatggtatttggttctatgataag
caggactgccagcgcattgctcacaggatgaagattttgactcaccaggagcagatcgtg
gctcagtctcagggcggttggttgtctccaggaggaggaggagcagcaggaagaggaaga
gctgctgctggaggaggaggaggaggaggaggtggaggagggagaggaggaggaagagga
aataatgaggcgaaggcagtggacatcatccagatgttgaccaaagcacgctcagaatat
gacaaggataagactaactcagagccaaaggaaattggcggtagcagtgttctgtgtgga
aacccaaacctgatcaaaccgataccagtaaaaccgaacgctcaggacagtgagggtgca
gagcccaagactatctccttggccactctgtttggctctcaacatcagcatcaccacgct
tctaaaccccactccgcccctcctgtggcagcttccacgtccacaggaaaagtcacacgg
ccacctgtagcccgcacgctaacctacgatgatgctgtaaactctggcagaaacgtgacc
tctgctacagggaacatcaccctcgcggggagttcagatggaggggtcaggccggtagtt
ggggaagacggtggaaatgttgtcgctgcactccagggtcccgccgcagctcatcagccg
cccggccaacctcagcactgtccggccattgcgaagctaatgcaggggcagaggagcgtc
gcaggcgttgggggcgttcttcagaccttatcggagtcccccgagaaccggctgtgcgat
aacggggtgccgctcgagcaccaccatcaccacctgtaccatcatcaccatcgcgagctc
caccctcatcaccaccagcagcagctgcagcctgacccgataaaaagacttttacaaacc
cagccaactcctcaactcgccacctccttcacctccactgcttctccttgttgctccaac
ccacctcctctgcagcacaaccctctcctcccctcccagcctggaggagtggattctgtg
tcatgtccgcaccttcaagtgcaacaaagccagcagctatttttcaaccttaccaagtct
caaacagaaatgttgaatagccaccagacaccttgtaaagcacagggaacaggtctgtcc
tcccagatgcaaggtgtggtgtcgcctcatgagctgctccacaaactccagttggtccag
caggaacagaacctgacctctcacgatccacctcgaccctatccaggactggcgcctcgg
ttcctggggcccaaccagaatcaggattcaggctcttctttagttccacccccgaccaca
ggccaaaaggctgcgctgcagtttcaggtcatctccccccagcgaatacctgccactgtg
gcccccactctgctcctttctcccagtgtgttcactcaaacaaagacgggcagcgggctg
ccagcagcagctcaggacagctgctctgtccccacgagtctgcccagacccccgctgcag
gacgaggtcagagcaccttctagaagccagcttcaagcagcgcttcttcatctgatccag
actgacagctcattcctggactccatctatgaagcatacgtcagccgcttttctaacggc
tccagcagcaagtactga
DBGET
integrated database retrieval system
