Kryptolebias marmoratus (mangrove rivulus): 108235128
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Entry
108235128 CDS
T05608
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108235128 (rtn1a)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108235128 (rtn1a)
Membrane trafficking [BR:
kmr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108235128 (rtn1a)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108235128 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
108235128
NCBI-ProteinID:
XP_017270423
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All DBs
Position
LG10:12921351..12940544
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AA seq
730 aa
AA seq
DB search
MSAEELGSEGKWFGDDRERNGLFGSGAPPARFGDEFKARGGGEAAGDLDKQFHPFQDDGR
PPVAMETASTDDPMSGLFRKPMNDDGDVYTSLLSNQSFTIGREASYLSDDLKPSNHSSDS
SGLDHFSSDTYDFNSKSKMSSSLLDDMPKPLLGSDKTESYNYMDISHGEELRDHHQGAPP
NIFDKGLADHDLLGSYMDKNPGRDDEDEDDDDDEEGNLGPALGSHSFPYVEDPSDEELTD
YRSYRNLGGTPQTASPVKITLTESQLPGSRAELQQRPPPVSERENVLSVGQQGVPTVTLS
EPEDDSPSSTPNASPTRKGFPSQDMFKTEAGKPTTPKSNPGTKPGSRDHDGSSAESGDSE
IELVSEEPPKASSNPFAEPPKSKVTFSQASNPFDNPPVAKGGFGLAGGHAPPTAYSILRE
EREAELDSDLIIESASEESPKREQGLKQGVTPPSPLVPTTAPPRGTTEAVPVEPVIATKV
KSPVKTEEDRFSKPKPPTAAVPPEVRSEKAHQDDMHKPTNEGKGDTGKPAVSVLLEGFNK
QKAVDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQ
AVQKTDEGHPFKAYLEIEIALSQDQISKYADKILLYTNTCMKELRRLFLVQDLVDSLKFA
VLMWLLTYVGALFNGLTLLILAVVSMFTLPVVYEKHQAQIDQYVGLIRTQVNSVVGKIQA
KIPGAKRKEE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgaggagctcggctcggaggggaagtggttcggggacgaccgcgagaggaac
ggcctgttcggcagcggcgcgccgccggctcggttcggcgacgaattcaaggcgcgaggc
ggcggcgaggcggcgggcgacctggataaacagtttcatcccttccaggacgacgggagg
cctcccgttgctatggaaactgcatctacagatgatcccatgtctggcctgttcaggaag
cccatgaatgacgatggtgacgtctacacgtccctgctgtccaatcagagcttcacaatt
ggccgggaagcttcttacctgtcggacgacctgaagccctccaaccactcctctgactcc
tctggcctggatcacttctcgagtgacacctacgacttcaactccaaaagcaagatgtct
tccagcttattggacgacatgccgaaacctctgctgggctcggacaagacagaatcctac
aactacatggatatcagccatggggaagagctccgtgaccatcaccagggggctccaccc
aacatttttgacaaaggcttagctgatcacgatttactgggcagctacatggataagaac
cctggaagagatgatgaggatgaggatgatgatgatgatgaggaagggaatctcggtcca
gcactgggctcccactctttcccctatgtggaagatccatctgatgaggagctgacggat
taccgctcctaccggaacctgggcgggaccccgcagacggccagcccggtgaagatcacc
ttgaccgagtcccagcttccaggctccagggctgagctgcagcaacgtcctcctcctgtc
tctgagcgggaaaatgtcctgagcgtgggccaacagggggtccccacagtgacgctgtca
gagccggaggacgacagcccctcatccactccgaatgcttcaccaacacgtaaaggattc
ccctctcaagacatgttcaagactgaagcaggaaaacctacaactcccaaaagtaaccca
ggcacgaagcctggcagcagggaccacgacggcagcagcgcagagtccggagactctgag
attgagctcgtgtctgaagagcctcccaaggccagtagcaacccatttgcagaaccccct
aaaagcaaggtcactttcagccaggctagcaatcccttcgacaatcccccagtcgccaag
ggtggtttcggcctcgccggcgggcacgctccacccacggcctacagcattctgagggag
gagagggaggccgagctcgacagcgatctcatcatcgagtctgcatccgaagaaagccca
aagagagagcagggcctcaaacagggagtcacccctccctcccctctggttcccaccacc
gctcctccccgcggtaccactgaggcggtcccagtcgaacccgtgattgccacaaaggtc
aagagccccgtgaaaacagaggaggatcgtttcagcaagcctaagcccccgaccgctgct
gtgcctccagaggtgagatcagaaaaggcccaccaggacgacatgcacaaacccaccaac
gagggcaaaggagacacaggaaaacctgctgtgtcagtgcttttggagggcttcaacaaa
caaaaagcggttgacctcctgtactggaggaacgtgaagcagtcgggcgccgtgttcagc
agtgtgctcctgctcctcttctccctgacccagttcagcgtggtcagtgtcggcgcctac
ttagccctggcggccctgtctgccaccatcagcttcaggatctacaagtccgtgctgcag
gccgtgcagaagaccgacgagggccatccgttcaaagcttacctggagattgaaattgct
ctgtctcaggaccagattagtaaatatgctgacaaaatcctgctgtacaccaacacctgc
atgaaggaactccgccggctgtttctcgtgcaagatctggtcgactctttgaagtttgca
gttctgatgtggctgctgacctacgtgggcgctctctttaatggcctgacactgctcatc
ctagctgtggtctccatgttcaccttgcctgtggtctatgagaagcatcaggcacaaatt
gatcaatacgtgggactaatacggacccaggtcaactctgtggtggggaagatccaggcg
aagatccccggcgctaagaggaaggaggagtag
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