Kryptolebias marmoratus (mangrove rivulus): 108235131
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Entry
108235131 CDS
T05608
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03250
Viral life cycle - HIV-1
kmr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108235131 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108235131 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108235131 (samhd1)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108235131 (samhd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
HD
HD_assoc_2
PDEase_I
SAM_TNK
Motif
Other DBs
NCBI-GeneID:
108235131
NCBI-ProteinID:
XP_017270421
UniProt:
A0A3Q3B7S4
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All DBs
Position
LG8:complement(15270391..15279593)
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AA seq
624 aa
AA seq
DB search
MASRKRPIESGSSPEEVFKTPEKRVSVVRLPDSNFTELGVEEVCKYLRKEGLGEWEDKFR
AQKITGVGLRYLKDADLEKIGIKCLGDRLQILHSLRKLWQIEAEPNKVFNDPIHGHVELH
PLLIRFIDTPQFQRLRNIKQLGGTYFVFPGASHNRFEHSIGVGYLAGQLVQALNERQPEL
LISRRDILCVQIAGLCHDLGHGPFSHMFDGIFMPKARPAKSWKHETVSLAMFDHLVEDNG
LKPVMKEHGLLLPQDLDFIKEQIAGPLNTNSGPRQKQWPYKGRTPDKSFLYEIVANKRNG
IDVDKWDYFARDCYHLGIQNNFDYHRFLKFARVCEVDGQKQICTRDKEVGNLYDMFHTRN
CLHRRAYQHKVCNIIETMITEAFLKADEHIQIEGSGGAKFTLSKAIDDMVAYTKLTDNVF
EQILHSSSLELAEARKILHNILCRNLYKCLGQTQPDKALNVTPEQLHSWEADLARSIPQS
GSQDVSLQPEDFVVNVIVMDYGMKEKNPINNVRFYCKEDPTKAIQIRKNQVSKLLPEQFV
EQLIRVYCKKTDEKSLEVGKKQFVQWCMDKNFSKPQDGDVIAPELTPLKASWCSDEGESS
DGTSKQTNSAPVNGYERAKTQLFK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcgaaagcggccgatagagtcaggctcgagccccgaagaggtgttcaaaacc
ccggagaagagagtgtcggtggtccggctgccggactccaacttcacggagttgggagtc
gaggaagtatgcaagtatctgcgaaaggaaggtcttggcgaatgggaggataaatttaga
gcacaaaaaataacaggtgtagggctgcggtatctgaaggatgcagacctggaaaaaatt
ggcataaagtgtctgggggaccgtctgcagatcctgcacagcctcaggaagctgtggcag
atagaagctgaaccaaacaaggtgttcaacgacccgatccacggccacgtggagctacac
cccctcctcatccgattcatcgacacgcctcagtttcagagacttcgaaacatcaagcag
ctcggagggacgtacttcgtctttcctggagcgtcacacaaccgctttgagcacagcatt
ggggtcgggtacttggccgggcagctcgttcaagctctcaatgagaggcagccggagctg
ctcatctctcgcagggacatcctgtgcgtccagatcgctggcctctgtcatgacctggga
catgggccgttctctcacatgtttgatggcatattcatgcccaaagcacgtccggcaaaa
agctggaagcatgagaccgtctctctcgccatgtttgaccacctggtggaggacaatggt
ctgaagccagtcatgaaggagcacggcctgctgctgccccaggacctggactttattaaa
gagcagatagccggaccactgaatactaattcaggtccaagacagaagcagtggccgtac
aaaggccgcactccagacaagtccttcctgtatgaaatcgtggccaataaaaggaacggc
attgatgtggataagtgggactactttgccagagactgttaccatttgggcatccagaat
aattttgattatcatcgcttcctgaaatttgccagagtgtgtgaggttgatgggcagaag
cagatctgcactagagacaaggaggtaggcaacctgtatgatatgttccacacaagaaac
tgtctgcacaggagagcctaccagcacaaagtgtgcaacatcatcgagaccatgatcaca
gaggcctttttaaaagctgatgaacacatccagattgaaggctccggaggggcgaagttc
actctctctaaagccatagatgatatggttgcctacaccaagctgacagataatgtattt
gaacaaatactacactcgtcatctctggagcttgccgaggcaaggaagatcctgcacaac
atactatgccgaaacctctacaagtgtctgggtcaaacccagccagacaaagccttgaac
gtcactccggaacagcttcacagctgggaggcagatttggctcgatccatccctcagagt
ggcagccaggatgtcagtctgcagcctgaggacttcgtagtcaatgtaattgttatggac
tatgggatgaaggagaagaaccctatcaacaatgtgcgtttctattgcaaagaggaccca
accaaagccatccagatacgcaagaatcaggtatccaaactccttccagagcagtttgtt
gagcagctgatcagggtttactgcaagaagacggatgagaagagtctggaggttggaaag
aagcagtttgttcagtggtgcatggataagaacttctcaaagcctcaggatggagatgtg
atagcacctgagctgacgcctctgaaagccagctggtgcagcgacgaaggcgagagcagt
gacgggacgtccaaacaaaccaactctgctcctgtgaatggatatgagagagctaaaact
cagctgtttaaataa
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