Kryptolebias marmoratus (mangrove rivulus): 108235208
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Entry
108235208 CDS
T05608
Symbol
hoxc6a
Name
(RefSeq) homeobox protein Hox-C6a
KO
K09303
homeobox protein HoxA/B/D3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108235208 (hoxc6a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108235208 (hoxc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108235208
NCBI-ProteinID:
XP_017270532
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All DBs
Position
LG8:complement(17014738..17018478)
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AA seq
403 aa
AA seq
DB search
MNSYFANPSLSCHLSGGQEVLPNVPLNSTTYDTVRHFSSYGAAVTQNRIYAPFYSPQENV
VFGSGRAQYEYGSNVFLQDKDVLPSCRQTNMGLNSQSHIAQEYSLDQGRAGAQEQKSNIP
IYPWMQRMNSHSAGVGYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCL
TERQIKIWFQNRRMKYKKDQKSKGLSSSSGGPSPTGSPPLPMQSSASFLNSMHPMGGGGG
VPAYDTPSPPSFGKLHQGVSYSMSTAYSNVPMKGCPPQKYGAPDPDYGDPHHNLVQSNNA
GYGTPTNMQASPVYVGGGSYVEPMPVSGPSMYGLNHLGPTPPHHQTMDYNVGGSMSTTNQ
HHVGGGGPQGPCDPPTHPTYTELSAHHTSTQGRIQEAPKLTHL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttatttcgcaaacccgtcgctctcctgccatttatccggtggtcaagaggtt
ttgcccaacgtccccctgaactccaccacctatgacacagtcagacatttttcgtcgtac
ggcgctgcggtgacccagaatcggatatatgcacctttttactcccctcaagaaaacgtg
gtttttggctccggcagggctcagtatgagtacggatcaaacgtgttcctccaggacaag
gacgtgctgcccagctgcaggcaaacaaacatgggactcaactcacagagccacattgct
caagagtacagcctggatcaagggagagcaggagcccaggagcagaaaagcaacatcccg
atctacccgtggatgcagcgcatgaactcacacagcgcaggagtgggctacgggacggac
aggcgcagagggcgtcagatatactctcgttaccaaaccctcgagctggaaaaggagttc
cactttaaccgctacctgaccaggcgcagacgcatcgagattgccaacgcgctctgccta
accgagcgccagatcaaaatctggttccagaaccgacgcatgaagtacaagaaggatcag
aagtcaaagggcttgagctccagctctggaggaccgtcgccgacaggctcccctcctctg
cccatgcagtcttctgctagcttcctgaactcaatgcatcctatgggaggaggaggaggg
gtgcctgcctacgataccccttctccaccatcctttggaaagctccatcagggagtgtct
tattctatgtccactgcctattccaatgttcctatgaaggggtgccccccacagaagtat
ggtgccccagatccagactatggtgacccccaccataacttagtgcagtccaacaatgct
ggctatgggacacctactaacatgcaagccagtccagtctacgttgggggtggcagctat
gtagaacccatgcctgtctcgggtccctccatgtacgggctaaatcaccttggtcccacg
ccgccccaccaccaaaccatggactacaatgtcggagggtccatgtcgaccaccaaccag
caccatgtgggtggaggggggcctcagggtccctgtgatccacccacacacccgacttac
actgagctgtcggcgcaccacacctcaactcagggcagaatccaagaagcacccaagctc
actcacctgtag
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