Kryptolebias marmoratus (mangrove rivulus): 108235235
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Entry
108235235 CDS
T05608
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108235235 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
kmr03310
]
108235235 (rarga)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
108235235 (rarga)
Nuclear receptors [BR:
kmr03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
108235235 (rarga)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
Motif
Other DBs
NCBI-GeneID:
108235235
NCBI-ProteinID:
XP_017270592
UniProt:
A0A3Q3BFA6
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Position
LG8:complement(17134823..17173372)
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AA seq
509 aa
AA seq
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MATNREQQVGHMTGFPPAVYPFPFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRSDLEEPEKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QTECNENAPPPPPPPPPPPALVLKQEAEDEDDNWATENGSEPSPEEEDEDDDDDLGDEER
DRGSDSDGEPWGVPDNLDGSRKGLVGRAQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggaacagcaggtgggtcacatgaccggcttcccacctgctgtctac
ccgttccccttcaactccatgagaagccactcccccttcgacctgctggccaacagcagc
ctgtttgggagatttggggccgacctgccaaaggagatggcggctctctcggtggagacc
cagagcaccagctcagaggagatggtgcccagttctccgtctccccctcctccacctcgt
gtctacaagccctgctttgtgtgccaggacaagtcctcagggtatcactatggggtcagc
tcctgtgagggctgcaagggcttcttccgtcgcagtatccagaagaacatggtgtacacc
tgccaccgtgacaagaactgccagattaacaaggtcacacgcaaccgctgccagtactgc
aggctgcagaaatgctttgaggtcggcatgtccaaagaagcggtgcgtaatgacagaaac
aagaagaagaaggatgtgaaggaggaggtggtgcttcctgagagctacgagctaagtgga
gagcttgaagagttggtcaataaagtgagcaaagctcaccaagaaacctttccgtcactt
tgccagctgggaaaatacaccaccaactccagctcagaccaccgtgttcagctagatctg
ggactctgggacaagttcagcgagctctccaccaaatgcatcatcaagattgtggaattt
gccaagcggctgccaggtttcaccaccctgaccatcgctgaccaaatcactctgctgaag
tcagcctgcctggacatcttgatgctgagaatctgcacacgctacactccagaacaggac
actatgaccttctcagatggcctcactttgaatcgtactcagatgcacaacgctggcttt
ggacctctaacagacctggtctttgcctttgctggtcaacttctgcctctggagatggac
gacacagaaactggtctcctcagtgccatctgcctcatctgtggagaccgcagtgatcta
gaggagccggagaaagtagataagctgcaagagcccctacttgaggctctgaagatctac
gcccgccgcagacgccccaacaaaccccacatgttcccccgcatgctgatgaagatcact
gacctcaggggaatcagcacaaagggtgcagagagagctatcactctaaagatggagatc
ccaggcccaatgcctcctctgatcagggagatgctcgagaacccagaggccttcgaagac
cagacagagtgtaacgaaaatgcgccacccccaccgccgccgccgccgccaccaccagcg
cttgtcttgaagcaggaagctgaggacgaggacgacaactgggccacagaaaacggcagc
gagccgtcgccagaagaggaggacgaagacgacgacgacgacctgggagacgaggagcga
gacaggggctcggacagtgacggggagccctggggggttccggataacttagatgggtcg
aggaaaggccttgttgggagggcacagtga
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