Kryptolebias marmoratus (mangrove rivulus): 108235270
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Entry
108235270 CDS
T05608
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04137
Mitophagy - animal
kmr04140
Autophagy - animal
kmr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108235270 (hif1aa)
04137 Mitophagy - animal
108235270 (hif1aa)
04148 Efferocytosis
108235270 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108235270 (hif1aa)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108235270 (hif1aa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
108235270
NCBI-ProteinID:
XP_017270670
UniProt:
A0A3Q3AAS4
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Position
LG10:complement(12724964..12736401)
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AA seq
751 aa
AA seq
DB search
MDTGIIPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAKELPLPHSTSSSLDKASIMR
LTISYLRMRKLLCIEEPVVAEQTELDIQLNSSYLKALEGFLMVLSEDGDMIYLSENVSKC
LGLAQFDLTGHSVFDFTHPCDQEELREMLIYRTGSKKVKEPNTERSFFVRMKCTLTSRGR
TVNVKSATWKVLHCSGHVHVHDSQAEQTAEGQKEPLVPYLVLICDPIPHPSNIEVPLDTK
TFLSRHTMDMKFTYCDERITELMGYDPEDLLHRSVYEYYHALDSDHLTKTHHHLFAKGQV
TTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEDKLILSLEQTEDV
KPVKKKEEQEEEQVEIESSITIRVGKEEKSPELDVVKLFTDMVEPEPVGSLYERFKHNSE
ALTLLAPAAGDTIISLDFSSPGAESDVHVLKDVPLYNDVVLPSTSDKLTLPLSPLPPSEP
FTAANTPAEEVKSERFAPSPTTSPPHGSAEANGPLGFSFPMDSDMNSDFKLDLVEKFFAI
DPESKPPFNTQPMEDLDLEMLAPYIPMDDDFQLRCLTPEEPLTCGPVKSSESSPVLVKQE
ARSYPNSLFSPSDSHTASSEPVSSPSPTIILLARTPEMEKAVSVRNLAAQNTPRKRKLSE
LKEMIEQGSLPQEQLEKGKKLKATEPGAATTVLLLPSDMASRLLGTTSDGAGPLFTLPHL
TSYDCEVNAPLQGRQYLLQGEELLRALDHVN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaatcatacctgaaaaaaaaagggtgagctcggagcgcaggaaggagaaa
tcgagggacgcagcgagatgccgccgtgggaaggagtcggaggtgttctacgagctggcc
aaggagctgcccctcccccacagcaccagctcgagcctggacaaggcctccatcatgagg
ctgaccatcagttacctgcgcatgaggaaactactctgcatcgaagagccagtggtagcg
gagcaaacggagctcgacatccagctgaacagctcctacctaaaggcactggagggcttt
ctgatggtgctgtctgaagatggagatatgatctatctgtccgagaacgtcagcaagtgc
cttggcctcgcacagtttgacctgactggacacagtgtgtttgacttcacacatccctgc
gatcaggaggagctgagagagatgctcatctacagaacaggctccaagaaagtcaaggaa
ccaaatacagagcgaagcttctttgtccggatgaagtgcaccctcacaagcaggggccgc
accgtcaacgtcaagtcagctacatggaaggtgcttcattgctcgggtcacgtccacgtt
cacgacagccaggctgagcagaccgccgaggggcagaaggagcctttggtcccctacctg
gtcctgatctgcgaccccatccctcacccgtccaacatcgaggtccctctggacacaaag
accttcctcagccgccacacgatggacatgaagttcacatactgtgacgagaggatcact
gaactcatgggttatgatccagaggacctgctgcaccgttctgtgtatgagtattaccac
gctctggactcggaccatctaaccaagactcaccaccacctgtttgctaagggccaggtc
accacgggtcagtaccgaatgttggcgaaaagagggggctttgtgtgggtggaaacacag
gccactgtcatctacaacaacaagaactcacagccacagtgtgttgtctgtgtcaacttt
gtgctcagtgggatccaggaggacaaattaatcctgtctttggagcagactgaggatgtg
aagccagtgaagaagaaggaagaacaggaggaagagcaggtcgagattgagagcagcatc
actatccgggtggggaaggaggagaagagcccagaactggatgtggtcaagctctttaca
gatatggtggagcccgagccggtgggtagcctgtacgaacggtttaagcataactccgag
gcgctcaccctgctggcaccagcagctggggacacaatcatctccctggacttcagctct
cccggtgcagaatcggacgtgcacgtgctgaaggacgtccctctctacaacgacgtcgtg
ctgccctccacaagcgacaagctgaccctgcctctgtcccccctgccccccagcgagcct
tttactgccgccaacacccccgctgaggaggtaaagtccgagcgctttgctccgtcccca
accacttctcctccccacggttctgctgaggctaacggtcctttgggcttttctttccca
atggattcagacatgaactcagatttcaaactagacttggtggagaagttttttgccatc
gacccggagtccaaaccccccttcaacacacagccaatggaggacttggacctggagatg
ctggcgccctacatccccatggatgacgacttccagctgcgctgcctcactccagaggag
cctctaacttgtggaccagtcaaatcctccgaaagttcccccgtcctcgtcaaacaggaa
gcccgcagctatcccaactctctgttcagcccgtctgacagtcacacagcttcctcagag
cccgtcagctcgccgtctcccaccatcatccttttggctaggactccagagatggagaaa
gccgtgtccgtcagaaatctggcagctcagaacacgccgcgcaaaagaaaactgagcgaa
ttaaaagagatgattgagcagggaagtttgccccaagagcagcttgagaagggcaaaaag
ctgaaggcgacagagccgggagcagctacgaccgtacttctactcccttcagacatggcg
agtcgattgctcggcaccacttcggacggcgccggccccctcttcaccctgccgcatctc
accagctacgactgcgaggtgaacgcccccttacagggtcgtcagtacctcctgcagggc
gaggagctgctgcgcgctctggaccacgtcaactga
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