Kryptolebias marmoratus (mangrove rivulus): 108235276
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Entry
108235276 CDS
T05608
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108235276 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108235276 (hnrnpa1b)
03041 Spliceosome [BR:
kmr03041
]
108235276 (hnrnpa1b)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108235276 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
108235276 (hnrnpa1b)
Spliceosome [BR:
kmr03041
]
Common components
Common spliceosomal components
hnRNP proteins
108235276 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
108235276
NCBI-ProteinID:
XP_017270675
UniProt:
A0A3Q3BPN6
LinkDB
All DBs
Position
LG8:complement(16928262..16931921)
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AA seq
336 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDAVDRIVIQKYHTINSHNCEVRKAL
TKQEMQSVGMGMRGGRSSGGRPYDYDRGFNQGGRGRYGDGPYNCNGGDGGYGGGPGGPGG
YNQGGNRGYNQGYNQGGGGGGYGGNGYDSNGYGNCGGGGGNNYNNMGHYDPQASNFGPMK
NNFGGGGGGGSSGGRNFGGYGGGSNNPGGYGRPGRF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagacgtcccacgtgagccggagcagctccgtaagctgttcatcggaggcctg
agcttcgagacgacagacgaaagcctgcgggctcattttgaacaatggggctctctaaca
gattgcgtggtgatgagggaccccaacagcaagagatccaggggctttggctttgtaaca
tattcatcagtacaggaagttgatgctgccatgtctgcccgtcctcataaggtagatgga
agagtggtcgagcccaaacgagcagtttccagagaggattcaaaccgcccaggtgctcac
ataactgtgaagaagatctttgttggaggcattaaagaagacacagaagaatcccatttg
agggattatttccagcagtttggtaaaatcgaggtcattgatatcatgaccgaccgcaac
actggaaagaagaggggctttgcttttgtcacctttgatgaccatgacgccgttgatagg
attgtcatccagaagtaccacacaatcaactctcacaactgtgaagtgagaaaggccctt
accaaacaggaaatgcagagtgtaggaatgggaatgagaggaggccggagcagcggggga
aggccgtatgattacgacagaggctttaatcaaggtggcagaggaagatatggagatggt
ccctacaattgcaatggtggtgatggtggttatgggggtggtcccggtggtcctggaggc
tacaaccaaggcggcaaccgtggttataaccagggttacaaccagggtggtggaggtggc
ggctatggaggaaacggttacgacagcaatggttacggcaactgcggcggaggtggtggt
aacaactacaacaatatgggccattatgacccccaggcttctaacttcggtccaatgaag
aataactttggtggcggcggcggcggcggcagcagtggtggcaggaactttggtggctac
ggaggaggctcaaacaatcctggtggctatggccgtccaggacgtttttaa
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integrated database retrieval system
